BLASTX nr result

ID: Coptis23_contig00016432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016432
         (1622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22374.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255...   443   e-122
ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_002521981.1| protein farnesyltransferase alpha subunit, p...   398   e-108
ref|XP_003530146.1| PREDICTED: uncharacterized protein LOC100807...   390   e-106

>emb|CBI22374.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  444 bits (1143), Expect = e-122
 Identities = 242/436 (55%), Positives = 294/436 (67%), Gaps = 17/436 (3%)
 Frame = -2

Query: 1390 EELNSDETNGLNLLKQLEHILESDTLIDEVGFIHPSQFAALNDEASGSSDDSQYDS---- 1223
            E+  ++E  G++LL QLEHILESD LIDEVGFIHPSQF  LN+EA G    S +      
Sbjct: 53   EQKMTEEEKGVDLLNQLEHILESDPLIDEVGFIHPSQFFILNEEAGGVLPSSNHHLLQSE 112

Query: 1222 ---TVFWNKDNKLAISTDALFPLYNAAKHAFMTMMKLYKILISSPGEADTDLDGKVTGTI 1052
               + FWN+D+KL IS D L PLY AAK+AFM  +  YK         +  +  + +G  
Sbjct: 113  DGISSFWNRDHKLGISIDILLPLYRAAKNAFMAAIAQYK------AHGNPSVKEEKSGDE 166

Query: 1051 SVSGESLETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSP 872
            ++S   LE+EVMKHS+ALLLLS DFGTAWNSRKLV+ KKQ  S+FMDE LLSAL+LSYSP
Sbjct: 167  NISCH-LESEVMKHSRALLLLSSDFGTAWNSRKLVLSKKQDLSMFMDEFLLSALVLSYSP 225

Query: 871  KSEHAWSHRRWVLKRIDGKCPNFQDLVERESELVEKIAEKSKMNYRAWSHRCWLIAYMTK 692
            KSE AWSHRRWV+K I G     Q+++ +ESELVEKIAEKSKMNYRAW+HRCWL+ YMT 
Sbjct: 226  KSEQAWSHRRWVIKMIAGNYTYLQEVLGKESELVEKIAEKSKMNYRAWNHRCWLVFYMTG 285

Query: 691  EQVRNEL-KSRKWAELHVGDNSCFDYRQHLLHRMLEHSYSKLDPSGSSYCTPDVYHFWME 515
            EQV +EL KSR WA LHV DN CF YR+ L+ R+LE S  K DP+ SS    ++Y  W E
Sbjct: 286  EQVLHELDKSRSWAGLHVADNCCFHYRRRLMLRILECSCYKQDPNASSGYNIEIYRVWKE 345

Query: 514  ELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDGSWYPC--------GVDIDNFVS 359
            ELDWN+MLI+RYIGRE LW+HRRFLS   +KHF  TDG    C          DI NF+ 
Sbjct: 346  ELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFA-TDGGDLSCHSELKTDANHDISNFLD 404

Query: 358  GEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLNSGAIELQEK-LRDLGVLKTT 182
             E Q   SCL I    FED + Q VF+A YILW++KQ+     IELQ+K L   G LK  
Sbjct: 405  NEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYECEGIELQQKQLIRGGELKIL 464

Query: 181  LNQLCPEKTLLWNDLI 134
            L +  PEK+ LW+ +I
Sbjct: 465  LKKHRPEKSFLWDSII 480


>ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255283 [Vitis vinifera]
          Length = 425

 Score =  443 bits (1140), Expect = e-122
 Identities = 241/432 (55%), Positives = 292/432 (67%), Gaps = 17/432 (3%)
 Frame = -2

Query: 1378 SDETNGLNLLKQLEHILESDTLIDEVGFIHPSQFAALNDEASGSSDDSQYDS-------T 1220
            ++E  G++LL QLEHILESD LIDEVGFIHPSQF  LN+EA G    S +         +
Sbjct: 2    TEEEKGVDLLNQLEHILESDPLIDEVGFIHPSQFFILNEEAGGVLPSSNHHLLQSEDGIS 61

Query: 1219 VFWNKDNKLAISTDALFPLYNAAKHAFMTMMKLYKILISSPGEADTDLDGKVTGTISVSG 1040
             FWN+D+KL IS D L PLY AAK+AFM  +  YK         +  +  + +G  ++S 
Sbjct: 62   SFWNRDHKLGISIDILLPLYRAAKNAFMAAIAQYK------AHGNPSVKEEKSGDENISC 115

Query: 1039 ESLETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEH 860
              LE+EVMKHS+ALLLLS DFGTAWNSRKLV+ KKQ  S+FMDE LLSAL+LSYSPKSE 
Sbjct: 116  H-LESEVMKHSRALLLLSSDFGTAWNSRKLVLSKKQDLSMFMDEFLLSALVLSYSPKSEQ 174

Query: 859  AWSHRRWVLKRIDGKCPNFQDLVERESELVEKIAEKSKMNYRAWSHRCWLIAYMTKEQVR 680
            AWSHRRWV+K I G     Q+++ +ESELVEKIAEKSKMNYRAW+HRCWL+ YMT EQV 
Sbjct: 175  AWSHRRWVIKMIAGNYTYLQEVLGKESELVEKIAEKSKMNYRAWNHRCWLVFYMTGEQVL 234

Query: 679  NEL-KSRKWAELHVGDNSCFDYRQHLLHRMLEHSYSKLDPSGSSYCTPDVYHFWMEELDW 503
            +EL KSR WA LHV DN CF YR+ L+ R+LE S  K DP+ SS    ++Y  W EELDW
Sbjct: 235  HELDKSRSWAGLHVADNCCFHYRRRLMLRILECSCYKQDPNASSGYNIEIYRVWKEELDW 294

Query: 502  NEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDGSWYPC--------GVDIDNFVSGEFQ 347
            N+MLI+RYIGRE LW+HRRFLS   +KHF  TDG    C          DI NF+  E Q
Sbjct: 295  NKMLIERYIGREGLWLHRRFLSLCWIKHFA-TDGGDLSCHSELKTDANHDISNFLDNEIQ 353

Query: 346  LFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLNSGAIELQEK-LRDLGVLKTTLNQL 170
               SCL I    FED + Q VF+A YILW++KQ+     IELQ+K L   G LK  L + 
Sbjct: 354  YVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYECEGIELQQKQLIRGGELKILLKKH 413

Query: 169  CPEKTLLWNDLI 134
             PEK+ LW+ +I
Sbjct: 414  RPEKSFLWDSII 425


>ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|222858033|gb|EEE95580.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  424 bits (1089), Expect = e-116
 Identities = 233/427 (54%), Positives = 286/427 (66%), Gaps = 13/427 (3%)
 Frame = -2

Query: 1366 NGLNLLKQLEHILESDTLIDEVGFIHPSQFAALNDEASGSSDDSQYDSTVFWNKDNKLAI 1187
            N L+LL + E ILESD LIDEVGFIHPSQF  LN EAS S +   ++   FW++D+KLAI
Sbjct: 11   NSLSLLNEFELILESDPLIDEVGFIHPSQFVTLNKEASSSLE---HEDANFWSRDHKLAI 67

Query: 1186 STDALFPLYNAAKHAFMTMMKLYKILISSPGEADTDLDGKVTGTISVSGESLETEVMKHS 1007
            STD L PLY A K  FM  +  YK        +D   D            +LE+EVMKHS
Sbjct: 68   STDVLLPLYKAVKDVFMHAISQYK---RHENLSDASWDEG----------NLESEVMKHS 114

Query: 1006 KALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHAWSHRRWVLKR 827
            KALLLLS DFGTAWN RKL+V KKQ   +F+DEL LSAL+LSYSPKSE AW HRRWV+K 
Sbjct: 115  KALLLLSCDFGTAWNFRKLIVSKKQHMLIFLDELFLSALVLSYSPKSEKAWCHRRWVIKM 174

Query: 826  IDGKCPNFQDLVERESELVEKIAEKSKMNYRAWSHRCWLIAYMTKEQVRNEL-KSRKWAE 650
            + GKC   QD+V +ESELVEKIAE+SKMNYRAW+HRCWL++YMT EQV +EL KSR WA 
Sbjct: 175  VAGKCSTMQDIVGKESELVEKIAERSKMNYRAWNHRCWLVSYMTTEQVLHELKKSRNWAG 234

Query: 649  LHVGDNSCFDYRQHLLHRMLEHSYSKLDPSGSSYCTPDVYHFWMEELDWNEMLIKRYIGR 470
            LHV DNSCF YR  L+ R+ E    KL+  G+S    ++Y  W EELDWNE LIK Y+GR
Sbjct: 235  LHVADNSCFHYRTRLMLRIREDHCHKLE-DGTSDGNDEIYRIWQEELDWNEALIKCYVGR 293

Query: 469  ESLWVHRRFLSQFGLKHFCFTDG---SWYPC----GVDIDNFVSGEFQLFQSCLTISDTG 311
            E+LW+HRRFLS   ++HF    G   ++  C      DI  F+  E  L  SC TI D  
Sbjct: 294  EALWLHRRFLSLSWIRHFTTNLGDTSNYRVCKSRINADIGIFMDNELHLANSCSTIPDNE 353

Query: 310  FEDGQAQGVFAAAYILWVS-----KQLLNSGAIELQEKLRDLGVLKTTLNQLCPEKTLLW 146
            FED QAQ +++A YILW++     +Q+ +S  IELQEK  +LG LKT LN  CPE++ L 
Sbjct: 354  FEDFQAQALYSATYILWLTTLFFHQQISDSQGIELQEK-PNLGSLKTVLNMACPERSFL- 411

Query: 145  NDLIGGV 125
            +D+  G+
Sbjct: 412  SDISTGI 418


>ref|XP_002521981.1| protein farnesyltransferase alpha subunit, putative [Ricinus
            communis] gi|223538785|gb|EEF40385.1| protein
            farnesyltransferase alpha subunit, putative [Ricinus
            communis]
          Length = 431

 Score =  398 bits (1023), Expect = e-108
 Identities = 220/424 (51%), Positives = 277/424 (65%), Gaps = 15/424 (3%)
 Frame = -2

Query: 1363 GLNLLKQLEHILESDTLIDEVGFIHPSQFAALNDEASGSS----------DDSQYDSTVF 1214
            G+ LL Q E IL+SD LIDEVGFIHPSQF AL+ E               +   ++ST F
Sbjct: 13   GIGLLNQFELILDSDPLIDEVGFIHPSQFTALSSELQAKDAILSSKIDKVNVLDHESTSF 72

Query: 1213 WNKDNKLAISTDALFPLYNAAKHAFMTMMKLYKILISSPGEADTDLDGKVTGTISVSGES 1034
            WN+D+KL IS   + PLY AAK AFM  +K +K + +   E D           S    S
Sbjct: 73   WNRDHKLGISMHVILPLYTAAKDAFMNAIKGFKRVENLSLEDD-----------SCGFSS 121

Query: 1033 LETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMDELLLSALILSYSPKSEHAW 854
            LE+EVMKHSKALLLLS DFGTAWNSRKL++ KKQ   +F++ELLLSAL+LSYSPKSE +W
Sbjct: 122  LESEVMKHSKALLLLSCDFGTAWNSRKLILSKKQYMPMFIEELLLSALVLSYSPKSEQSW 181

Query: 853  SHRRWVLKRIDGKCPNFQDLVERESELVEKIAEKSKMNYRAWSHRCWLIAYMTKEQVRNE 674
             HRRWV+K I GKC   Q+++ +ESELVEKIAE+SKMNYRAW+HRCWL+ YMT+EQV  E
Sbjct: 182  CHRRWVIKMISGKCSTLQEILGKESELVEKIAERSKMNYRAWNHRCWLVGYMTREQVLLE 241

Query: 673  L-KSRKWAELHVGDNSCFDYRQHLLHRMLEHSYSKLDPSGSSYCTPDVYHFWMEELDWNE 497
            L KSR WA LHV D+SCF YR  L+ R+LE    K D   S +   ++   W EEL WNE
Sbjct: 242  LKKSRYWAGLHVADSSCFHYRMRLMLRILEQFCCKQDDESSDH-DVEICQMWQEELQWNE 300

Query: 496  MLIKRYIGRESLWVHRRFLSQFGLKHFC--FTDGSWYPCGV--DIDNFVSGEFQLFQSCL 329
             LI+ Y+GRE+LW++RRFLS   ++HF       S +   V  +I+ F+  E  L  S  
Sbjct: 301  ELIELYVGREALWLYRRFLSLCWIRHFISDIIHHSEHKSRVVANINEFLDHELCLVNSWS 360

Query: 328  TISDTGFEDGQAQGVFAAAYILWVSKQLLNSGAIELQEKLRDLGVLKTTLNQLCPEKTLL 149
            TI D  +ED QAQ V +A YILW+ KQ+  S  IEL++KL + G  KT LN  C E++ L
Sbjct: 361  TIPDDDYEDFQAQAVHSATYILWLMKQIPESQGIELKKKL-NAGNWKTMLNVACAERSSL 419

Query: 148  WNDL 137
            W+ L
Sbjct: 420  WDSL 423


>ref|XP_003530146.1| PREDICTED: uncharacterized protein LOC100807426 [Glycine max]
          Length = 438

 Score =  390 bits (1003), Expect = e-106
 Identities = 219/444 (49%), Positives = 291/444 (65%), Gaps = 26/444 (5%)
 Frame = -2

Query: 1396 MTEELNSDETNGLNLLKQLEHILESDTLIDEVGFIHPSQFAALNDEASGSS--------- 1244
            M+EE +S +   ++LL+QLE ILESD LIDE+GFIHPSQF+ L +E+  SS         
Sbjct: 1    MSEESHS-KVEAMDLLRQLEDILESDALIDELGFIHPSQFSLLKEESDISSNLSDEAIHQ 59

Query: 1243 ---------DDSQYDSTVFWNKDNKLAISTDALFPLYNAAKHAFMTMMKLYKILISSPGE 1091
                     + S+ D+  FWN+D+KL IST  L PLY AAKHAFMT  K Y++      +
Sbjct: 60   SADRVVISEESSKQDNLYFWNRDHKLGISTHVLLPLYRAAKHAFMTTFKQYRMC-----D 114

Query: 1090 ADTDLDGKVTGTISVSGESLETEVMKHSKALLLLSWDFGTAWNSRKLVVLKKQQFSLFMD 911
              +D DG      S S + LE+ +M+HSK+LLLLS DF TAWN RKL+V KK++ S+F+D
Sbjct: 115  NQSDKDGMCLPAFS-SCDHLESILMRHSKSLLLLSCDFMTAWNCRKLIVSKKKKLSMFVD 173

Query: 910  ELLLSALILSYSPKSEHAWSHRRWVLKRIDGKCPNFQDLVERESELVEKIAEKSKMNYRA 731
            ELLLS L+LSYSPKSE AW+HRRWV+K I   C NF++++ +ESELVEKIAE SKMNYRA
Sbjct: 174  ELLLSELVLSYSPKSEQAWNHRRWVIKSISANCSNFKEILGKESELVEKIAESSKMNYRA 233

Query: 730  WSHRCWLIAYMTKEQVRNEL-KSRKWAELHVGDNSCFDYRQHLLHRMLEHSYSKLDPSGS 554
            W+HRCWLI+YMT +QV  EL KSR WA LHV DN CF YR+ LL + +E+  S ++ + S
Sbjct: 234  WNHRCWLISYMTNKQVLYELKKSRSWAALHVADNCCFHYRRRLLLKFMENQNS-VEETIS 292

Query: 553  SYCTPDVYHFWMEELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFT--DGSWYPCGV 380
                 D+     +ELDWNE LIKRY+GRE+LW+HRRFLS   + +F     D S++    
Sbjct: 293  CGHNADIVQALKDELDWNEALIKRYVGREALWLHRRFLSMCWINNFLLDSGDASYHSKEA 352

Query: 379  -----DIDNFVSGEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLNSGAIELQE 215
                 D   F+  E  L  S  T  D  F D QAQ V++A+YILW+  Q+  S   +L +
Sbjct: 353  ISMHHDFGTFLRNELCLLHSS-TFVDDDFVDVQAQAVYSASYILWLKVQVPKSLENKLLQ 411

Query: 214  KLRDLGVLKTTLNQLCPEKTLLWN 143
            K++D+  LK  L++ CPE++ L+N
Sbjct: 412  KIKDVD-LKILLDKSCPERSSLFN 434


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