BLASTX nr result

ID: Coptis23_contig00016402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016402
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vi...   594   e-167
emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]   594   e-167
ref|XP_002305820.1| predicted protein [Populus trichocarpa] gi|2...   557   e-156
ref|XP_003552724.1| PREDICTED: mannose-6-phosphate isomerase-lik...   553   e-155
ref|XP_003532343.1| PREDICTED: mannose-6-phosphate isomerase-lik...   547   e-153

>ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vitis vinifera]
          Length = 420

 Score =  594 bits (1532), Expect = e-167
 Identities = 294/423 (69%), Positives = 353/423 (83%)
 Frame = +1

Query: 115  EKVVESKKKLLPQRLRCSVQNYDWGKVGKESQVARLFSLNSGLDIEVGRSYAEIWMGTHD 294
            E  V  K+K L +RLRCSVQNYDWG++G ES VARLFS+NSG ++++ + YAE+WMGTH+
Sbjct: 2    EVQVPDKQKRL-RRLRCSVQNYDWGRLGSESTVARLFSMNSGAEVQLDKPYAELWMGTHE 60

Query: 295  SGPSFIVDSGETGGESFTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSIAKALSIQAH 474
            SGPSF++  GE  G+S TL SWISENP+VLG +V E+WG++LPFLFKVLS+AKALSIQAH
Sbjct: 61   SGPSFLI--GE--GKSRTLKSWISENPNVLGDEVVEKWGSDLPFLFKVLSVAKALSIQAH 116

Query: 475  PDKELARALHDSHPSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVG 654
            PDKELAR LH   P +YKD NHKPEMALA+TEF+ALCGFVSL ELK VL  VPEIVE+VG
Sbjct: 117  PDKELARTLHKLQPHVYKDDNHKPEMALAITEFQALCGFVSLGELKIVLKDVPEIVEVVG 176

Query: 655  NVDADQVTHLDEHAGVERVKTVLRSIFTQLMSAEKDTVSEVVSKLKGRLTMEKKVRQLTD 834
            + DA+QV  + E  G E+VK+VL+SIFTQLMSA K+ VS++++KLK RL ME +VRQLTD
Sbjct: 177  SADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEMVSKIITKLKIRLQMESQVRQLTD 236

Query: 835  KEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYLGANEPHAYLSGECMECMATSDNV 1014
            KE+LVLRLEKQYP D+GV + FF NYV LNPGEALYLGANEPHAYL GEC+ECMATSDNV
Sbjct: 237  KEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYLGANEPHAYLYGECIECMATSDNV 296

Query: 1015 VRAGLTPKLRDVPTLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQRAT 1194
            VRAGLTPK RDV TLCSMLTYKQGFPEILQG+PL+PYT+RY PPFDEFEVDCC LP+ A+
Sbjct: 297  VRAGLTPKHRDVQTLCSMLTYKQGFPEILQGVPLNPYTRRYLPPFDEFEVDCCSLPKGAS 356

Query: 1195 TVFPAISGPSIFIVTSGQGTMQMESSSNEELKEGSVIFVPADTQITIACISDLQLYRAGV 1374
             +FPA+ GPSIF+VT G+GT  +  +  E++ EG V+F PADT+I+    + L LYRAGV
Sbjct: 357  AMFPAVEGPSIFVVTVGEGTAHV-GACEEQVGEGDVLFAPADTEISFGTSTQLNLYRAGV 415

Query: 1375 NSK 1383
            NS+
Sbjct: 416  NSR 418


>emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]
          Length = 455

 Score =  594 bits (1532), Expect = e-167
 Identities = 292/427 (68%), Positives = 356/427 (83%)
 Frame = +1

Query: 103  KNMGEKVVESKKKLLPQRLRCSVQNYDWGKVGKESQVARLFSLNSGLDIEVGRSYAEIWM 282
            + M  +V + +K+L  +RLRCSVQNYDWG++G ES VARLFS+NSG ++++ + YAE+WM
Sbjct: 34   RRMEVQVPDKQKRL--RRLRCSVQNYDWGRLGSESTVARLFSMNSGAEVQLDKPYAELWM 91

Query: 283  GTHDSGPSFIVDSGETGGESFTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSIAKALS 462
            GTH+SGPSF++  GE  G+S TL SWISENP+VLG +V E+WG++LPFLFKVLS+AKALS
Sbjct: 92   GTHESGPSFLI--GE--GKSRTLKSWISENPNVLGDEVVEKWGSDLPFLFKVLSVAKALS 147

Query: 463  IQAHPDKELARALHDSHPSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIV 642
            IQAHPDKELAR LH   P +YKD NHKPEMALA+TEF+ALCGFVSL ELK VL  VPEIV
Sbjct: 148  IQAHPDKELARTLHKLQPHVYKDDNHKPEMALAITEFQALCGFVSLXELKIVLKDVPEIV 207

Query: 643  ELVGNVDADQVTHLDEHAGVERVKTVLRSIFTQLMSAEKDTVSEVVSKLKGRLTMEKKVR 822
            E+VG+ DA+QV  + E  G E+VK+VL+SIFTQLMSA K+ VS++++KLK RL ME ++R
Sbjct: 208  EVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEMVSKIITKLKIRLQMESQMR 267

Query: 823  QLTDKEELVLRLEKQYPNDIGVAATFFLNYVILNPGEALYLGANEPHAYLSGECMECMAT 1002
            QLTDKE+LVLRLEKQYP D+GV + FF NYV LNPGEALYLGANEPHAYL GEC+ECMAT
Sbjct: 268  QLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYLGANEPHAYLYGECIECMAT 327

Query: 1003 SDNVVRAGLTPKLRDVPTLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLP 1182
            SDNVVRAGLTPK RDV TLCSMLTYKQGFPEILQG+PL+PYT+RY PPFDEFEVDCC LP
Sbjct: 328  SDNVVRAGLTPKHRDVQTLCSMLTYKQGFPEILQGVPLNPYTRRYLPPFDEFEVDCCSLP 387

Query: 1183 QRATTVFPAISGPSIFIVTSGQGTMQMESSSNEELKEGSVIFVPADTQITIACISDLQLY 1362
            + A+ +FPA+ GPSIF+VT G+GT  +  +  E++ EG V+F PADT+I+    + L LY
Sbjct: 388  KGASAMFPAVEGPSIFVVTVGEGTAHV-GACEEQVGEGDVLFAPADTEISFGTSTQLNLY 446

Query: 1363 RAGVNSK 1383
            RAGVNS+
Sbjct: 447  RAGVNSR 453


>ref|XP_002305820.1| predicted protein [Populus trichocarpa] gi|222848784|gb|EEE86331.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  557 bits (1435), Expect = e-156
 Identities = 281/420 (66%), Positives = 334/420 (79%), Gaps = 8/420 (1%)
 Frame = +1

Query: 151  QRLRCSVQNYDWGKVGKE-SQVARLFSLNSGLDIEVGRS--YAEIWMGTHDSGPSFIVDS 321
            +RLRCSVQNYDWGK G E S+VARL+ LNSG DIE+ +   +AE WMGTH SGPSF+V+S
Sbjct: 16   KRLRCSVQNYDWGKKGTEGSEVARLYELNSGSDIELEKKKPFAEFWMGTHGSGPSFVVES 75

Query: 322  GETGGESFT-----LSSWISENPSVLGKKVFEEWGNNLPFLFKVLSIAKALSIQAHPDKE 486
            G   G+S       L  WI +NP+VLG  V ++WG +LPFLFKVLS+AKALSIQAHPDKE
Sbjct: 76   GVENGDSIGSGSMGLKEWILKNPNVLGDGVLDKWGCDLPFLFKVLSVAKALSIQAHPDKE 135

Query: 487  LARALHDSHPSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDA 666
            LA+ LH   P+ YKD NHKPEMALA+TEFEALCGF+S+ ELK VL  VPEIVE+VG+ +A
Sbjct: 136  LAKVLHKLQPNRYKDDNHKPEMALAITEFEALCGFISIGELKGVLRDVPEIVEVVGSAEA 195

Query: 667  DQVTHLDEHAGVERVKTVLRSIFTQLMSAEKDTVSEVVSKLKGRLTMEKKVRQLTDKEEL 846
            +QV  + E    E+VK+VLRS FTQLMSA ++  +E +SKLK RL ME K+RQLT KE+L
Sbjct: 196  NQVLQIHEQDHEEKVKSVLRSAFTQLMSASQEITAEAISKLKSRLYMESKIRQLTGKEQL 255

Query: 847  VLRLEKQYPNDIGVAATFFLNYVILNPGEALYLGANEPHAYLSGECMECMATSDNVVRAG 1026
            VL+LEKQYP DIGV + FFLNYV LN GEALYLGANEPHAYL GEC+ECMATSDNVVRAG
Sbjct: 256  VLQLEKQYPADIGVISAFFLNYVKLNSGEALYLGANEPHAYLYGECIECMATSDNVVRAG 315

Query: 1027 LTPKLRDVPTLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQRATTVFP 1206
            LTPKLRD+ TLCSMLTYKQGFPEIL+G PL PY  RY PPFDEFEVD C+LP+ A+TVFP
Sbjct: 316  LTPKLRDIQTLCSMLTYKQGFPEILKGFPLSPYITRYLPPFDEFEVDRCILPRGASTVFP 375

Query: 1207 AISGPSIFIVTSGQGTMQMESSSNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSKF 1386
            AI GPSIF+V  G G M    SS + + EG V+F PA+++I+++  S+L LYRAGVNS+F
Sbjct: 376  AIPGPSIFLVMVGDGAM-CTGSSKDVVMEGDVLFAPANSEISVSTASELHLYRAGVNSRF 434


>ref|XP_003552724.1| PREDICTED: mannose-6-phosphate isomerase-like [Glycine max]
          Length = 421

 Score =  553 bits (1424), Expect = e-155
 Identities = 271/413 (65%), Positives = 325/413 (78%), Gaps = 1/413 (0%)
 Frame = +1

Query: 151  QRLRCSVQNYDWGKVGKESQVARLFSLNSGLDIEVGRSYAEIWMGTHDSGPSFIVDS-GE 327
            QRL CSV+NYDWG  G+ S+VARL +LNS  +      YAE+WMGTHDSGPSF+  S G 
Sbjct: 7    QRLHCSVKNYDWGLPGRVSEVARLHALNSASEFHAEDPYAELWMGTHDSGPSFLASSNGN 66

Query: 328  TGGESFTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSIAKALSIQAHPDKELARALHD 507
              G S  L +WISENP VLG KV  +WG++LPFLFKVLS+ KALSIQAHPDKELAR LH 
Sbjct: 67   ENGVS--LKAWISENPDVLGHKVLHKWGSDLPFLFKVLSVGKALSIQAHPDKELARTLHK 124

Query: 508  SHPSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVTHLD 687
             HP +YKDGNHKPEMALALT FEALCGF++L+ELK VL +VPEIVELVG  + + V   +
Sbjct: 125  LHPDLYKDGNHKPEMALALTNFEALCGFITLKELKGVLHTVPEIVELVGATNTNLVLQTN 184

Query: 688  EHAGVERVKTVLRSIFTQLMSAEKDTVSEVVSKLKGRLTMEKKVRQLTDKEELVLRLEKQ 867
            +  G E+VK VL+++FT LMSA KD V++ V++LK RL  E +VRQLTDKE+LVLRLEKQ
Sbjct: 185  DQDGEEKVKPVLQAVFTDLMSASKDRVTDAVNRLKSRLLKESEVRQLTDKEQLVLRLEKQ 244

Query: 868  YPNDIGVAATFFLNYVILNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRD 1047
            YP D+GV A FFLN+V LNPGEAL+LGANEPHAYLSGEC+ECMATSDNVVRAGLTPK RD
Sbjct: 245  YPADVGVIAAFFLNHVKLNPGEALFLGANEPHAYLSGECVECMATSDNVVRAGLTPKHRD 304

Query: 1048 VPTLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQRATTVFPAISGPSI 1227
            V TLCSMLTYKQG PEIL+G+ ++PY  +Y+PPF+EFE+D C+LPQ  T VFPA+ GPSI
Sbjct: 305  VQTLCSMLTYKQGSPEILRGVSVNPYVNKYTPPFEEFEIDRCILPQGETVVFPAVPGPSI 364

Query: 1228 FIVTSGQGTMQMESSSNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSKF 1386
            F+VT G+GTM         + EG V+F  A+T+I++   S+L LYR GVNSKF
Sbjct: 365  FLVTVGEGTMNTGLPKGHVVTEGDVLFAAANTEISVTSASELNLYRTGVNSKF 417


>ref|XP_003532343.1| PREDICTED: mannose-6-phosphate isomerase-like [Glycine max]
          Length = 421

 Score =  547 bits (1410), Expect = e-153
 Identities = 266/412 (64%), Positives = 321/412 (77%)
 Frame = +1

Query: 151  QRLRCSVQNYDWGKVGKESQVARLFSLNSGLDIEVGRSYAEIWMGTHDSGPSFIVDSGET 330
            QRL CSV+NYDWG  G  S+VARL +LNS   +     +AE+WMGTHDSGPSF+  S   
Sbjct: 7    QRLHCSVKNYDWGLPGHVSEVARLHALNSASQLHAEDPFAELWMGTHDSGPSFLASSNRN 66

Query: 331  GGESFTLSSWISENPSVLGKKVFEEWGNNLPFLFKVLSIAKALSIQAHPDKELARALHDS 510
            G    +L +WISENP VLG KV  +WG++LPFLFKVLS+ KALSIQAHPDKELAR LH  
Sbjct: 67   GN-GVSLKAWISENPDVLGDKVLHKWGSDLPFLFKVLSVGKALSIQAHPDKELARTLHKL 125

Query: 511  HPSIYKDGNHKPEMALALTEFEALCGFVSLQELKDVLCSVPEIVELVGNVDADQVTHLDE 690
            HP +YKD NHKPEMALA+T FEALCGF++L+ELK VL +VPEIVELVG  + + V   ++
Sbjct: 126  HPDLYKDANHKPEMALAITSFEALCGFITLKELKGVLHTVPEIVELVGATNTNLVLQTND 185

Query: 691  HAGVERVKTVLRSIFTQLMSAEKDTVSEVVSKLKGRLTMEKKVRQLTDKEELVLRLEKQY 870
              G E+VK VL+++FT LMSA KD V++ V++LK RL  E +VRQLTDKE+LVL+LEKQY
Sbjct: 186  QDGEEKVKPVLQAVFTDLMSACKDRVTDAVNRLKSRLLKESEVRQLTDKEQLVLQLEKQY 245

Query: 871  PNDIGVAATFFLNYVILNPGEALYLGANEPHAYLSGECMECMATSDNVVRAGLTPKLRDV 1050
            P D+GV A FFLN+V LNPGEAL+LGANEPHAYLSGEC+ECMATSDNVVRAGLTPK RDV
Sbjct: 246  PADVGVIAAFFLNHVKLNPGEALFLGANEPHAYLSGECVECMATSDNVVRAGLTPKHRDV 305

Query: 1051 PTLCSMLTYKQGFPEILQGIPLDPYTKRYSPPFDEFEVDCCVLPQRATTVFPAISGPSIF 1230
             TLCSMLTYKQG PEIL G+ ++PY  +Y+PPF+EFE+D C+LPQ  T VFPA+ GPSIF
Sbjct: 306  QTLCSMLTYKQGSPEILHGVSVNPYVNKYTPPFEEFEIDRCILPQGETVVFPAVPGPSIF 365

Query: 1231 IVTSGQGTMQMESSSNEELKEGSVIFVPADTQITIACISDLQLYRAGVNSKF 1386
            +VT G+GTM   S     + EG V+F  A+T+I +   S+L LYR GVNSKF
Sbjct: 366  LVTVGEGTMNTGSPKGHVVTEGDVLFAAANTEIRVTSASELHLYRTGVNSKF 417


Top