BLASTX nr result

ID: Coptis23_contig00016375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016375
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
dbj|BAJ98080.1| predicted protein [Hordeum vulgare subsp. vulgare]     94   9e-18
gb|EAY90186.1| hypothetical protein OsI_11750 [Oryza sativa Indi...    94   1e-17
ref|NP_001050198.1| Os03g0370400 [Oryza sativa Japonica Group] g...    94   1e-17

>ref|XP_002312376.1| predicted protein [Populus trichocarpa] gi|222852196|gb|EEE89743.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  100 bits (250), Expect = 1e-19
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = -3

Query: 289 LGLCGAFNFFSWFTDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKLRLGDF 110
           +GLCG    FS FTDSY  S+G T YG+ T  G  L P SD+ +   VDLS+YKLR+GDF
Sbjct: 58  MGLCGFSCCFSCFTDSYRGSDGWTHYGIATMKG--LRPSSDSSAGSSVDLSSYKLRVGDF 115

Query: 109 VHASLSLLVFATVAYLDPNTVKCFRPSLKPEQEKLL 2
            HA  SL+VFA ++ LD NTVKCF PS +  ++ LL
Sbjct: 116 AHAFFSLIVFAVLSLLDRNTVKCFNPSFESTEKVLL 151


>ref|XP_002315542.1| predicted protein [Populus trichocarpa] gi|222864582|gb|EEF01713.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/96 (53%), Positives = 64/96 (66%)
 Frame = -3

Query: 289 LGLCGAFNFFSWFTDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKLRLGDF 110
           +GLCG    FS FTDSY  S+G T YG+ T  G  L P SD+     VDLS+YKLR+GDF
Sbjct: 58  MGLCGFSCCFSCFTDSYRGSDGWTHYGIATMKG--LWPSSDSAG-SSVDLSSYKLRVGDF 114

Query: 109 VHASLSLLVFATVAYLDPNTVKCFRPSLKPEQEKLL 2
            HA  SL+VF+ ++ LD NTVKCF PS +  ++ LL
Sbjct: 115 AHAFFSLIVFSVLSLLDSNTVKCFYPSFESTEKVLL 150


>dbj|BAJ98080.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 193

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/96 (51%), Positives = 64/96 (66%)
 Frame = -3

Query: 289 LGLCGAFNFFSWFTDSYTDSNGETRYGVVTKNGMILLPDSDTKSLDPVDLSAYKLRLGDF 110
           L LCGAF  FS FTDSY  S+G   YGVVT+ GM     +D  +    DLS Y+LR GDF
Sbjct: 59  LALCGAFCAFSSFTDSYVGSDGRVYYGVVTRRGMRTF-SADPDAGAARDLSGYRLRAGDF 117

Query: 109 VHASLSLLVFATVAYLDPNTVKCFRPSLKPEQEKLL 2
           VHA+LSL+VFAT+A LD +TV C  P+++  +  ++
Sbjct: 118 VHAALSLMVFATLALLDRDTVSCLYPAMEASERTMM 153


>gb|EAY90186.1| hypothetical protein OsI_11750 [Oryza sativa Indica Group]
          Length = 193

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
 Frame = -3

Query: 289 LGLCGAFNFFSWFTDSYTDSNGETRYGVVTKNGMILL---PDSDTKSLDPVDLSAYKLRL 119
           L LCGAF  FS FTDSY  S+G   YGVVT  G+      PD+  +     DLS Y+LR 
Sbjct: 60  LALCGAFCAFSSFTDSYVGSDGRVYYGVVTARGLRTFAADPDAAAR-----DLSGYRLRA 114

Query: 118 GDFVHASLSLLVFATVAYLDPNTVKCFRPSLKPEQEKLL 2
           GDFVHA+LSLLVFAT+A LD +TV C  P+L+  +  ++
Sbjct: 115 GDFVHAALSLLVFATIALLDADTVACLYPALEVSERTMM 153


>ref|NP_001050198.1| Os03g0370400 [Oryza sativa Japonica Group]
           gi|12039347|gb|AAG46134.1|AC082644_16 unknown protein
           [Oryza sativa Japonica Group]
           gi|108708378|gb|ABF96173.1| expressed protein [Oryza
           sativa Japonica Group] gi|113548669|dbj|BAF12112.1|
           Os03g0370400 [Oryza sativa Japonica Group]
           gi|125586406|gb|EAZ27070.1| hypothetical protein
           OsJ_10999 [Oryza sativa Japonica Group]
           gi|215765597|dbj|BAG87294.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 193

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
 Frame = -3

Query: 289 LGLCGAFNFFSWFTDSYTDSNGETRYGVVTKNGMILL---PDSDTKSLDPVDLSAYKLRL 119
           L LCGAF  FS FTDSY  S+G   YGVVT  G+      PD+  +     DLS Y+LR 
Sbjct: 60  LALCGAFCAFSSFTDSYVGSDGRVYYGVVTARGLRTFAADPDAAAR-----DLSGYRLRA 114

Query: 118 GDFVHASLSLLVFATVAYLDPNTVKCFRPSLKPEQEKLL 2
           GDFVHA+LSLLVFAT+A LD +TV C  P+L+  +  ++
Sbjct: 115 GDFVHAALSLLVFATIALLDADTVACLYPALEVSERTMM 153


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