BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016348
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003587346.1| cytochrome c oxidase subunit 1 [Cucurbita pe...   324   4e-87
ref|YP_003587228.1| cytochrome c oxidase subunit 1 [Citrullus la...   324   4e-87
dbj|BAD83459.2| cytochrome oxidase subunit 1, partial (mitochond...   322   2e-86
gb|AAP58356.1| cytoplasmic male sterility-associated cytochrome ...   320   6e-86
ref|NP_085587.1| cytochrome c oxidase subunit 1 [Arabidopsis tha...   320   6e-86

>ref|YP_003587346.1| cytochrome c oxidase subunit 1 [Cucurbita pepo]
           gi|259156811|gb|ACV96672.1| cytochrome c oxidase subunit
           1 [Cucurbita pepo]
          Length = 527

 Score =  324 bits (831), Expect = 4e-87
 Identities = 151/154 (98%), Positives = 152/154 (98%)
 Frame = -1

Query: 486 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNPTLFPMHF 307
           YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVN T FPMHF
Sbjct: 373 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHF 432

Query: 306 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 127
           LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA
Sbjct: 433 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 492

Query: 126 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 25
           VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV
Sbjct: 493 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526


>ref|YP_003587228.1| cytochrome c oxidase subunit 1 [Citrullus lanatus]
           gi|259156773|gb|ACV96635.1| cytochrome c oxidase subunit
           1 [Citrullus lanatus]
          Length = 527

 Score =  324 bits (831), Expect = 4e-87
 Identities = 151/154 (98%), Positives = 152/154 (98%)
 Frame = -1

Query: 486 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNPTLFPMHF 307
           YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVN T FPMHF
Sbjct: 373 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHF 432

Query: 306 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 127
           LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA
Sbjct: 433 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 492

Query: 126 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 25
           VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV
Sbjct: 493 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526


>dbj|BAD83459.2| cytochrome oxidase subunit 1, partial (mitochondrion) [Nicotiana
           tabacum]
          Length = 527

 Score =  322 bits (826), Expect = 2e-86
 Identities = 150/154 (97%), Positives = 151/154 (98%)
 Frame = -1

Query: 486 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNPTLFPMHF 307
           YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVN T FPMHF
Sbjct: 373 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNMTFFPMHF 432

Query: 306 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 127
           LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSG NKRCAPSPWA
Sbjct: 433 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGKNKRCAPSPWA 492

Query: 126 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 25
           VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV
Sbjct: 493 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526


>gb|AAP58356.1| cytoplasmic male sterility-associated cytochrome oxidase subunit I
           [Brassica juncea]
          Length = 527

 Score =  320 bits (821), Expect = 6e-86
 Identities = 149/154 (96%), Positives = 151/154 (98%)
 Frame = -1

Query: 486 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNPTLFPMHF 307
           YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVN T FPMHF
Sbjct: 373 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHF 432

Query: 306 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 127
           LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA
Sbjct: 433 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 492

Query: 126 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 25
           +E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV
Sbjct: 493 LELNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526


>ref|NP_085587.1| cytochrome c oxidase subunit 1 [Arabidopsis thaliana]
           gi|112253911|ref|YP_717165.1| cytochrome c oxidase
           subunit 1 [Brassica napus]
           gi|353526416|ref|YP_004927488.1| cox1 (mitochondrion)
           [Brassica oleracea] gi|353526497|ref|YP_004927568.1|
           cox1 (mitochondrion) [Brassica carinata]
           gi|353526672|ref|YP_004927841.1| cox1 (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531355|ref|YP_004927744.1| cox1 (mitochondrion)
           [Brassica juncea] gi|404481670|ref|YP_006666004.1|
           cytochrome c oxidase subunit 1 (mitochondrion) [Raphanus
           sativus] gi|45593157|sp|P60620.1|COX1_ARATH RecName:
           Full=Cytochrome c oxidase subunit 1; AltName:
           Full=Cytochrome c oxidase polypeptide I
           gi|45593158|sp|P60621.1|COX1_RAPSA RecName:
           Full=Cytochrome c oxidase subunit 1; AltName:
           Full=Cytochrome c oxidase polypeptide I
           gi|297416|emb|CAA40873.1| cytochrome c oxidase subunit I
           [Raphanus sativus] gi|1785788|emb|CAA69785.1| cytochrome
           c oxidase subunit 1 [Arabidopsis thaliana]
           gi|31790107|gb|AAP58355.1| cytochrome oxidase subunit I
           [Brassica juncea] gi|37591113|dbj|BAC98915.1| cytochrome
           c oxidase subunit 1 [Brassica napus]
           gi|335354860|gb|AEH43416.1| cox1 [Brassica rapa subsp.
           campestris] gi|335354961|gb|AEH43516.1| cox1 [Brassica
           oleracea] gi|335355028|gb|AEH43582.1| cox1 [Brassica
           carinata] gi|335355088|gb|AEH43641.1| cox1 [Brassica
           juncea] gi|339511287|emb|CBX48342.1| cox1 [Brassica
           napus] gi|339773248|gb|AEK01272.1| cox1 [Arabidopsis
           thaliana] gi|339773256|gb|AEK01279.1| cox1 [Arabidopsis
           thaliana] gi|339773308|gb|AEK01330.1| cox1 [Arabidopsis
           thaliana] gi|400278288|dbj|BAM36212.1| cytochrome c
           oxidase subunit 1 (mitochondrion) [Raphanus sativus]
           gi|400278324|dbj|BAM36247.1| cytochrome c oxidase
           subunit 1 (mitochondrion) [Raphanus sativus]
          Length = 527

 Score =  320 bits (821), Expect = 6e-86
 Identities = 149/154 (96%), Positives = 151/154 (98%)
 Frame = -1

Query: 486 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNPTLFPMHF 307
           YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVN T FPMHF
Sbjct: 373 YYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHF 432

Query: 306 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 127
           LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA
Sbjct: 433 LGLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA 492

Query: 126 VEQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 25
           +E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV
Sbjct: 493 LELNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526