BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016337
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...   226   5e-57
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]   225   9e-57
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...   213   6e-53
ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...   210   4e-52
ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arab...   201   1e-49

>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  226 bits (576), Expect = 5e-57
 Identities = 116/231 (50%), Positives = 154/231 (66%), Gaps = 1/231 (0%)
 Frame = +1

Query: 25  LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQNTLWSILLTLDFPTXXXXXX 204
           LPDE+W +I+ +GI ++ LTYKDLCC+SIS +RL++LSN   LWS LL+ DFP       
Sbjct: 4   LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFP------H 57

Query: 205 XXXXXXXXXXXTLQLPIKSVYXXXXXXXXXXXIAAHRRAVYRIESQINVHTSKLKEIEVQ 384
                      +  L  K +Y            AAHRRAV R+ESQI  H   L+EI+++
Sbjct: 58  TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 385 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 564
           L +E EK+K  ++EL NL +VR ASVA+NVWQPE++RG QK++V QCVVPV++R+  +EM
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVALNVWQPEVIRGWQKQMVGQCVVPVDARINALEM 177

Query: 565 EIRVCKQQIKVLDKGYREELHRLDEAKRKLVSMVYHPLRDYGSTEA-VDEC 714
           E+++C+QQI   D  YR E  RLD AK +LV M YHPLRDY ST + VDEC
Sbjct: 178 ELKLCRQQIAGSDNAYRNEKRRLDAAKERLVVMKYHPLRDYKSTSSGVDEC 228


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score =  225 bits (574), Expect = 9e-57
 Identities = 116/231 (50%), Positives = 153/231 (66%), Gaps = 1/231 (0%)
 Frame = +1

Query: 25  LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQNTLWSILLTLDFPTXXXXXX 204
           LPDE+W +I+ +GI ++ LTYKDLCC+SIS +RL++LSN   LWS LL+ DFP       
Sbjct: 4   LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFP------H 57

Query: 205 XXXXXXXXXXXTLQLPIKSVYXXXXXXXXXXXIAAHRRAVYRIESQINVHTSKLKEIEVQ 384
                      +  L  K +Y            AAHRRAV R+ESQI  H   L+EI+++
Sbjct: 58  TEASVSNGTVSSSSLSPKLMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 385 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 564
           L +E EK+K  ++EL NL +VR ASVA+NVWQPE++RG QK++V QCVVPV++R+  +EM
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVALNVWQPEVIRGWQKQMVGQCVVPVDARINALEM 177

Query: 565 EIRVCKQQIKVLDKGYREELHRLDEAKRKLVSMVYHPLRDYGSTEA-VDEC 714
           E+ +C+QQI   D  YR E  RLD AK +LV M YHPLRDY ST + VDEC
Sbjct: 178 ELXLCRQQIAGXDNAYRNEKRRLDAAKERLVIMKYHPLRDYKSTSSGVDEC 228


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score =  213 bits (541), Expect = 6e-53
 Identities = 106/221 (47%), Positives = 147/221 (66%)
 Frame = +1

Query: 25  LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQNTLWSILLTLDFPTXXXXXX 204
           +PDE+W +I+ +GI N+KL YKDLCCISIS +RL++LS +N+LW +LL+ DFP+      
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPSPNQQNP 63

Query: 205 XXXXXXXXXXXTLQLPIKSVYXXXXXXXXXXXIAAHRRAVYRIESQINVHTSKLKEIEVQ 384
                      +     KS Y           +AAHRRAV R ES++     K++EIE  
Sbjct: 64  NPNN-------STSASAKSTYKIKFEREKSRKVAAHRRAVLRKESEVLEFERKIREIENG 116

Query: 385 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 564
           L +E EK++   +EL NL +VR ASVA+NVWQPE++RG+QK++VEQ  VPVESRV  +EM
Sbjct: 117 LRQETEKMRATAAELSNLHKVRQASVALNVWQPEVIRGRQKQIVEQSAVPVESRVHSLEM 176

Query: 565 EIRVCKQQIKVLDKGYREELHRLDEAKRKLVSMVYHPLRDY 687
           E+++C+Q+I   DK YR+E  RL+ A  +L SM YHPLRD+
Sbjct: 177 ELKLCRQRISGFDKAYRDEKRRLELATEQLASMKYHPLRDH 217


>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
           gi|223529466|gb|EEF31423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  210 bits (534), Expect = 4e-52
 Identities = 106/226 (46%), Positives = 149/226 (65%)
 Frame = +1

Query: 19  TALPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQNTLWSILLTLDFPTXXXX 198
           + LPDE+W +II  GI ++  +YKDLCCISI  +RL++LSN+++ WS  L+ DFP     
Sbjct: 2   SGLPDELWRQIIEFGIRSSNFSYKDLCCISICCRRLHRLSNEHSFWSHFLSSDFPPSPQQ 61

Query: 199 XXXXXXXXXXXXXTLQLPIKSVYXXXXXXXXXXXIAAHRRAVYRIESQINVHTSKLKEIE 378
                        +     KS Y           +AAHRRAV R ES+I     K+++IE
Sbjct: 62  QQHQQNPNPNNYTSTA---KSTYKIRFEKEREKKVAAHRRAVLRKESEIMERERKIRDIE 118

Query: 379 VQLMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGV 558
            +L +E++K++   +EL NL +VR ASVA+NVWQPE+VRG+QK++VEQCVV  ESRV  +
Sbjct: 119 YRLCQESDKMRDTANELSNLHKVRQASVALNVWQPEVVRGRQKQLVEQCVVSFESRVHSL 178

Query: 559 EMEIRVCKQQIKVLDKGYREELHRLDEAKRKLVSMVYHPLRDYGST 696
           EME+++CKQQI   +K +R+E  RL++AK +L SM YHPL+DY ST
Sbjct: 179 EMELKLCKQQIVGFNKAHRDEKRRLEKAKEELASMKYHPLQDYRST 224


>ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arabidopsis lyrata subsp.
           lyrata] gi|297335552|gb|EFH65969.1| hypothetical protein
           ARALYDRAFT_311923 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score =  201 bits (512), Expect = 1e-49
 Identities = 105/227 (46%), Positives = 148/227 (65%)
 Frame = +1

Query: 16  ATALPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQNTLWSILLTLDFPTXXX 195
           A  +PDEIW +I+ +G+ ++  +YKDLCCISISS+RL +LS  ++LW +LL LDFPT   
Sbjct: 3   ANEIPDEIWRKIMEIGVKSSTFSYKDLCCISISSRRLCRLSCDDSLWDLLLFLDFPTHIV 62

Query: 196 XXXXXXXXXXXXXXTLQLPIKSVYXXXXXXXXXXXIAAHRRAVYRIESQINVHTSKLKEI 375
                         + Q P K +Y           +AAHRRA+ R ES+I+    +++E+
Sbjct: 63  SAS-----------SSQSPSKFIYRTRFEREKERKVAAHRRALLRKESEISEWGRRIREL 111

Query: 376 EVQLMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKG 555
           E +L  E E+L     +  +L +VR ASVA+NVWQP+IVRG+QK++VEQ  VPVE R++ 
Sbjct: 112 EARLSDEAERLHSSSLQFSDLLKVRQASVALNVWQPQIVRGRQKQLVEQNAVPVEGRLRA 171

Query: 556 VEMEIRVCKQQIKVLDKGYREELHRLDEAKRKLVSMVYHPLRDYGST 696
           +EMEI++CKQQI  ++K  RE  HR D A ++L SM YHPLRDY S+
Sbjct: 172 LEMEIKLCKQQIMGVNKALREVKHRFDIAIKELESMKYHPLRDYKSS 218