BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016333
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...    67   5e-09
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]    63   6e-08
ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arab...    61   2e-07
gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]              59   1e-06
ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabido...    59   1e-06

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = -1

Query: 746  DAPNMHLLNKILLYFDHVEIKSLEASKDKA---PVPGGNSDLGQAVGGSNLNQVFNGPDS 576
            +A N+ LLNKIL YFD +EIK+ EAS DK    P    + DL             +G +S
Sbjct: 1155 NASNVDLLNKILFYFDRLEIKNPEASTDKGIKNPESSEDKDLSPP----------SGSNS 1204

Query: 575  GQVAVLIPIEKFSY--LPDQQNDEGWRITKSKLRL 477
             +V+ L P EKFSY     QQN  GWR TKSK R+
Sbjct: 1205 DEVSELDPFEKFSYKHQEPQQNSNGWRTTKSKNRI 1239


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
 Frame = -1

Query: 746  DAPNMHLLNKILLYFDHVEIKSLEASKDKA---PVPGGNSDLGQAVGGSNLNQVFNGPDS 576
            +A N+ LLNKIL YFD +EIK+ EAS DK    P    + DL             +G +S
Sbjct: 1117 NASNVELLNKILFYFDRLEIKNPEASTDKGIKNPESSEDKDLSPP----------SGSNS 1166

Query: 575  GQVAVLIPIEKFSY--LPDQQNDEGWRITKSKL 483
             +V+ L P EK SY     QQN  GWR TKSK+
Sbjct: 1167 DEVSELDPFEKXSYKHQEPQQNSNGWRTTKSKV 1199


>ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
            lyrata] gi|297338969|gb|EFH69386.1| hypothetical protein
            ARALYDRAFT_889526 [Arabidopsis lyrata subsp. lyrata]
          Length = 1171

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -1

Query: 746  DAPNMHLLNKILLYFDHVEIKSLEASKDKAPVPGGNSDLGQAVGGSNLNQVFNGPDSGQV 567
            D+ N+  L+KIL + DH+E+ +  ASKD        S L      +  N   +  D    
Sbjct: 1083 DSSNVQFLSKILFFADHLEVTNEAASKD--------STLKHKEPLAETNAAVDKSD---- 1130

Query: 566  AVLIPIEKFSYLPDQQNDEG-WRITKSKLRLQKRGLLTQQ 450
             V   IE+F+Y P+QQ D G WR TKSKLRL KR L T Q
Sbjct: 1131 -VFKSIERFAYSPNQQQDSGGWRTTKSKLRLPKRNLPTSQ 1169


>gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
          Length = 1273

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -1

Query: 746  DAPNMHLLNKILLYFDHVEIKSLEASKDKAPVPGGNSDLGQAVGGSNLNQVFNGPDSGQV 567
            D+ N+  L+KIL + DH+E+ +  ASKD        S L      +  N   +  D    
Sbjct: 1185 DSSNVQFLSKILFFADHLEVTNEAASKD--------STLKHKEPLAETNAAVDKSD---- 1232

Query: 566  AVLIPIEKFSYLPDQQNDEG-WRITKSKLRLQKRGLLTQQ 450
             VL  I++F+Y P+QQ + G WR TKSKLRL KR L T +
Sbjct: 1233 -VLKSIDRFAYSPNQQQESGGWRTTKSKLRLPKRNLPTSK 1271


>ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
            gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding
            helicase protein [Arabidopsis thaliana]
          Length = 1175

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -1

Query: 746  DAPNMHLLNKILLYFDHVEIKSLEASKDKAPVPGGNSDLGQAVGGSNLNQVFNGPDSGQV 567
            D+ N+  L+KIL + DH+E+ +  ASKD        S L      +  N   +  D    
Sbjct: 1087 DSSNVQFLSKILFFADHLEVTNEAASKD--------STLKHKEPLAETNAAVDKSD---- 1134

Query: 566  AVLIPIEKFSYLPDQQNDEG-WRITKSKLRLQKRGLLTQQ 450
             VL  I++F+Y P+QQ + G WR TKSKLRL KR L T +
Sbjct: 1135 -VLKSIDRFAYSPNQQQESGGWRTTKSKLRLPKRNLPTSK 1173