BLASTX nr result

ID: Coptis23_contig00016331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016331
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22976.3| unnamed protein product [Vitis vinifera]              157   2e-36
emb|CAN74321.1| hypothetical protein VITISV_008594 [Vitis vinifera]   157   3e-36
ref|XP_003611996.1| hypothetical protein MTR_5g020150 [Medicago ...   147   3e-33
ref|XP_002336041.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
ref|XP_002529761.1| conserved hypothetical protein [Ricinus comm...   116   4e-24

>emb|CBI22976.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  157 bits (397), Expect = 2e-36
 Identities = 90/189 (47%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
 Frame = -1

Query: 711  GGERGAVLTLIVNDMGNHGCYPDCSESMTAPLQTEAIVNLVRRSPMNPLLARTLGSAVVI 532
            GGE GAVLT+ +NDMGN+G  PD +E ++ PL TEA VNL+RRSPM+ L+A TLGSA+V+
Sbjct: 974  GGEHGAVLTVTLNDMGNYGGCPDSAEKISMPLFTEASVNLIRRSPMSSLVAHTLGSAIVV 1033

Query: 531  EFILISLLGALVLFFICKCAFVLGNERRSF-TRDSKISKVEKSKDPSSSDQPLSEDVTHF 355
            EF+++  LG L+LFF C+CA VL NERRS   ++ ++SKV     P+ +   LS DVT+F
Sbjct: 1034 EFVVVFFLGVLLLFFTCRCAIVLINERRSCDVKNIRLSKVSSLHKPTPNTD-LSTDVTYF 1092

Query: 354  SGCCSSPFLLRSQLSNFRQRSCRQPVNRGPGN---DEXXXXXXXSDHQNIIARPNFMPFS 184
            +GCC S  LL  + S+F QRS     N   G+   D        SD       P+ MP +
Sbjct: 1093 TGCCPSRLLLTGRPSDFHQRSHHHSRNGDSGDSAQDTFGASQSYSDRYQRTPLPSSMPLA 1152

Query: 183  IEKMQSENV 157
            IEK +S  V
Sbjct: 1153 IEKGKSVTV 1161


>emb|CAN74321.1| hypothetical protein VITISV_008594 [Vitis vinifera]
          Length = 1176

 Score =  157 bits (396), Expect = 3e-36
 Identities = 90/189 (47%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
 Frame = -1

Query: 711  GGERGAVLTLIVNDMGNHGCYPDCSESMTAPLQTEAIVNLVRRSPMNPLLARTLGSAVVI 532
            GGE GAVLT+ +NDMGN+G  PD +E ++ PL TEA VNL+RRSPM+ L+A TLGSA+V+
Sbjct: 989  GGEHGAVLTVTLNDMGNYGGCPDSAEKISMPLFTEASVNLIRRSPMSSLVAHTLGSAIVV 1048

Query: 531  EFILISLLGALVLFFICKCAFVLGNERRS-FTRDSKISKVEKSKDPSSSDQPLSEDVTHF 355
            EF+++  LG L+LFF C+CA VL NERRS   ++ ++SKV     P+ +   LS D T+F
Sbjct: 1049 EFVVVFFLGVLLLFFTCRCAIVLINERRSRDIKNIRLSKVSSLHKPTPNTD-LSTDATYF 1107

Query: 354  SGCCSSPFLLRSQLSNFRQRSCRQPVNRGPGN---DEXXXXXXXSDHQNIIARPNFMPFS 184
            +GCC S  LL  + SNF QRS     N   G+   D        SD       P+ MP +
Sbjct: 1108 TGCCPSRLLLTGRPSNFHQRSHHHSRNGDSGDSAQDTFGASQSYSDRYQRTPLPSSMPLA 1167

Query: 183  IEKMQSENV 157
            IEK +S  V
Sbjct: 1168 IEKGKSVTV 1176


>ref|XP_003611996.1| hypothetical protein MTR_5g020150 [Medicago truncatula]
           gi|355513331|gb|AES94954.1| hypothetical protein
           MTR_5g020150 [Medicago truncatula]
          Length = 472

 Score =  147 bits (370), Expect = 3e-33
 Identities = 72/142 (50%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
 Frame = -1

Query: 711 GGERGAVLTLIVNDMGNHGCYPDCSESMTAPLQTEAIVNLVRRSPMNPLLARTLGSAVVI 532
           G E GA LTL +NDMGN+GCYPDC E M+  L TEAIVNL+R+ PM+  LA TLG+ +VI
Sbjct: 315 GDEHGATLTLTLNDMGNYGCYPDCEEGMSMQLYTEAIVNLMRKQPMDSFLAHTLGTIIVI 374

Query: 531 EFILISLLGALVLFFICKCAFVLGNERRSFTRDSKISKVEKSKDPSSSDQPLSEDVTHFS 352
           EF++I  LG L+L+F CKCA +L +ERR   + +  +  ++S +  +S   + E+ T+F+
Sbjct: 375 EFVIIFCLGLLLLYFTCKCAILLVHERRKNEKRTSEASTDQSSEGQTSSMTIPENATNFT 434

Query: 351 GCC--SSPFLLRSQLSNFRQRS 292
           GCC  SS    R Q  NFRQRS
Sbjct: 435 GCCWISSLLRFRMQSFNFRQRS 456


>ref|XP_002336041.1| predicted protein [Populus trichocarpa] gi|222839764|gb|EEE78087.1|
            predicted protein [Populus trichocarpa]
          Length = 1174

 Score =  145 bits (366), Expect = 8e-33
 Identities = 80/182 (43%), Positives = 114/182 (62%), Gaps = 1/182 (0%)
 Frame = -1

Query: 711  GGERGAVLTLIVNDMGNHGCYPDCSESMTAPLQTEAIVNLVRRSPMNPLLARTLGSAVVI 532
            G E  A+LT+ +NDMG++GC  DC++ +  PL  EA V L+RR  M+ LLA TLGSA+++
Sbjct: 994  GRESDAILTVKLNDMGHYGCSSDCTDKIAVPLHAEATVQLIRRRSMSSLLAHTLGSAILV 1053

Query: 531  EFILISLLGALVLFFICKCAFVLGNERRSFT-RDSKISKVEKSKDPSSSDQPLSEDVTHF 355
            EF+++  LG ++LFF CKCA  L NERR  + ++S++S V+ S+  S      S+D+T+F
Sbjct: 1054 EFLMVFSLGGILLFFTCKCAMHLANERRRISVKNSQLSSVQNSQKKSQYTD-FSKDMTNF 1112

Query: 354  SGCCSSPFLLRSQLSNFRQRSCRQPVNRGPGNDEXXXXXXXSDHQNIIARPNFMPFSIEK 175
            + CCSSPFLL  Q SNFRQRS ++      G +        S H ++   P   P  IEK
Sbjct: 1113 TCCCSSPFLLSGQTSNFRQRSNQRLRVEETGKNISSPPGSSSSH-HLQTPPGLTPLVIEK 1171

Query: 174  MQ 169
             Q
Sbjct: 1172 DQ 1173


>ref|XP_002529761.1| conserved hypothetical protein [Ricinus communis]
            gi|223530759|gb|EEF32627.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1059

 Score =  116 bits (291), Expect = 4e-24
 Identities = 54/89 (60%), Positives = 70/89 (78%)
 Frame = -1

Query: 711  GGERGAVLTLIVNDMGNHGCYPDCSESMTAPLQTEAIVNLVRRSPMNPLLARTLGSAVVI 532
            GGE GAVLT+ VNDMG++GCY DC+E ++ PL  EA VNL+ RSPM+ L A TLGSAV++
Sbjct: 938  GGENGAVLTVKVNDMGHYGCYSDCTERISMPLHAEATVNLIWRSPMSSLAAHTLGSAVIL 997

Query: 531  EFILISLLGALVLFFICKCAFVLGNERRS 445
            EF+++  LG ++LFF CKCA +L NER S
Sbjct: 998  EFLVVLSLGVILLFFTCKCAILLTNERCS 1026


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