BLASTX nr result

ID: Coptis23_contig00016319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016319
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266315.1| PREDICTED: acyl carrier protein 1, mitochond...   180   3e-43
ref|XP_002301222.1| predicted protein [Populus trichocarpa] gi|1...   177   2e-42
ref|XP_003624234.1| Acyl carrier protein [Medicago truncatula] g...   175   1e-41
ref|NP_001235044.1| uncharacterized protein LOC100306438 [Glycin...   172   6e-41
gb|ABK95371.1| unknown [Populus trichocarpa]                          172   7e-41

>ref|XP_002266315.1| PREDICTED: acyl carrier protein 1, mitochondrial [Vitis vinifera]
           gi|297734676|emb|CBI16727.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  180 bits (457), Expect = 3e-43
 Identities = 101/125 (80%), Positives = 105/125 (84%), Gaps = 6/125 (4%)
 Frame = +1

Query: 7   MALRAAILGHIRVVPAVTKQNVAKSSLN--RW---MSSH-DDHLDKEEVIDRVLSVVKSF 168
           MALRAAIL HIRV P +     A ++ N  RW   MSSH DDHL KEEVI+RVLSVVKSF
Sbjct: 1   MALRAAILRHIRV-PVLQTLAPASTASNWQRWIRPMSSHGDDHLQKEEVIERVLSVVKSF 59

Query: 169 PKVDPSQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISN 348
           PKVDPSQVT DVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYI N
Sbjct: 60  PKVDPSQVTADVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIYN 119

Query: 349 HPMAG 363
           HPMAG
Sbjct: 120 HPMAG 124


>ref|XP_002301222.1| predicted protein [Populus trichocarpa] gi|118481753|gb|ABK92816.1|
           unknown [Populus trichocarpa]
           gi|222842948|gb|EEE80495.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  177 bits (449), Expect = 2e-42
 Identities = 97/122 (79%), Positives = 103/122 (84%), Gaps = 4/122 (3%)
 Frame = +1

Query: 7   MALRAAILGHIRVVPAVT---KQN-VAKSSLNRWMSSHDDHLDKEEVIDRVLSVVKSFPK 174
           MALRAA+L HIRV P  T   K N  A S   R MSSHDDHL KEEV+DRV+SVVKSFPK
Sbjct: 1   MALRAAVLRHIRV-PVQTLRLKTNPCAPSGSVRLMSSHDDHLTKEEVVDRVVSVVKSFPK 59

Query: 175 VDPSQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHP 354
           VDPS+VT +VHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYI NHP
Sbjct: 60  VDPSRVTPEVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIHNHP 119

Query: 355 MA 360
           +A
Sbjct: 120 LA 121


>ref|XP_003624234.1| Acyl carrier protein [Medicago truncatula]
           gi|355499249|gb|AES80452.1| Acyl carrier protein
           [Medicago truncatula]
          Length = 119

 Score =  175 bits (443), Expect = 1e-41
 Identities = 89/118 (75%), Positives = 100/118 (84%)
 Frame = +1

Query: 7   MALRAAILGHIRVVPAVTKQNVAKSSLNRWMSSHDDHLDKEEVIDRVLSVVKSFPKVDPS 186
           MALRAAIL H+R+    T +    +   R MSSHDDH+ KEEV++RVLSV+K FPKVDPS
Sbjct: 1   MALRAAILRHVRIPIQSTPKLQPWNGSIRSMSSHDDHITKEEVVERVLSVIKDFPKVDPS 60

Query: 187 QVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHPMA 360
           +VT +VHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYISNHPM+
Sbjct: 61  KVTPEVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNHPMS 118


>ref|NP_001235044.1| uncharacterized protein LOC100306438 [Glycine max]
           gi|356531860|ref|XP_003534494.1| PREDICTED: acyl carrier
           protein 1, mitochondrial-like [Glycine max]
           gi|255628541|gb|ACU14615.1| unknown [Glycine max]
          Length = 116

 Score =  172 bits (437), Expect = 6e-41
 Identities = 93/120 (77%), Positives = 100/120 (83%), Gaps = 1/120 (0%)
 Frame = +1

Query: 7   MALRAAILGHIRVVPAVTKQNVAKSSLNRWMSSH-DDHLDKEEVIDRVLSVVKSFPKVDP 183
           MALRAA+L H+RV      Q   K    R MSSH DDHL KEEV++RVL+VVK FPKVDP
Sbjct: 1   MALRAAVLRHVRV----PLQAAPKLQPWRAMSSHGDDHLSKEEVVERVLAVVKDFPKVDP 56

Query: 184 SQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHPMAG 363
           S+V+ DVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSC LAIEYISNHPMAG
Sbjct: 57  SRVSPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCHLAIEYISNHPMAG 116


>gb|ABK95371.1| unknown [Populus trichocarpa]
          Length = 122

 Score =  172 bits (436), Expect = 7e-41
 Identities = 92/121 (76%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
 Frame = +1

Query: 7   MALRAAILGHIRVVPAVT--KQNV-AKSSLNRWMSSHDDHLDKEEVIDRVLSVVKSFPKV 177
           MALRAA+L H+RV       K N  A S   R MSSHDDHL KEEV +RVLSV+KSFPKV
Sbjct: 1   MALRAAVLRHVRVAVQTRELKSNPWAPSGSIRLMSSHDDHLTKEEVAERVLSVIKSFPKV 60

Query: 178 DPSQVTTDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCTLAIEYISNHPM 357
           DPS+VT +VHFQKDLGLDSLD+VEIVMALEEEFKLEIPDKEADKIDSC LAIEYI NHP+
Sbjct: 61  DPSRVTPEVHFQKDLGLDSLDSVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIHNHPL 120

Query: 358 A 360
           A
Sbjct: 121 A 121


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