BLASTX nr result

ID: Coptis23_contig00016315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016315
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38747.2| Polyprotein, putative [Solanum demissum]               110   2e-22
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]           108   3e-22
emb|CAN61858.1| hypothetical protein VITISV_016691 [Vitis vinifera]   108   3e-22
gb|ABA95797.1| retrotransposon protein, putative, unclassified [...   107   1e-21
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   106   2e-21

>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = -2

Query: 239  ASLSLVDIPRTVAETLAQPHWKAAMLEELHALEVNNTWVLVSLPPGRRAVGCKWVFTVKQ 60
            ASL  + +P+TV E L  P W  AML+E+HAL+ N+TW LV LP G++AVGCKWVFT+K 
Sbjct: 906  ASLDSIFVPKTVREALNHPGWYDAMLDEIHALDDNHTWNLVDLPKGKKAVGCKWVFTIKV 965

Query: 59   NPDGTVSRYKARLVAKGYA 3
            NPDG+++R KARLVAKGYA
Sbjct: 966  NPDGSMARLKARLVAKGYA 984


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = -2

Query: 239  ASLSLVDIPRTVAETLAQPHWKAAMLEELHALEVNNTWVLVSLPPGRRAVGCKWVFTVKQ 60
            AS+  + +P+TV E L  P WK AMLEE+ ALE N+TW LV LP G++ VGCKWVF VK 
Sbjct: 864  ASIDSISVPKTVTEALNHPGWKNAMLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKV 923

Query: 59   NPDGTVSRYKARLVAKGYA 3
            NPDG+V+R KARLVA+GYA
Sbjct: 924  NPDGSVARLKARLVARGYA 942


>emb|CAN61858.1| hypothetical protein VITISV_016691 [Vitis vinifera]
          Length = 763

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = -2

Query: 239 ASLSLVDIPRTVAETLAQPHWKAAMLEELHALEVNNTWVLVSLPPGRRAVGCKWVFTVKQ 60
           AS+  + +P+TV E L  P WK AMLEE+ ALE N+TW LV LP G++ VGCKWVF VK 
Sbjct: 258 ASIDSISVPKTVTEALNHPGWKNAMLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKV 317

Query: 59  NPDGTVSRYKARLVAKGYA 3
           NPDG+V+R KARLVA+GYA
Sbjct: 318 NPDGSVARLKARLVARGYA 336


>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1588

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/81 (65%), Positives = 58/81 (71%)
 Frame = -2

Query: 245  FQASLSLVDIPRTVAETLAQPHWKAAMLEELHALEVNNTWVLVSLPPGRRAVGCKWVFTV 66
            F ASL +V IP+        P WK AM EEL ALE N TW LV LP G+RAVGCKWVFTV
Sbjct: 1069 FIASLQIVPIPKDWRCAKQDPRWKDAMKEELRALEKNKTWELVKLPMGKRAVGCKWVFTV 1128

Query: 65   KQNPDGTVSRYKARLVAKGYA 3
            KQ P+G V RYKARLVAKGY+
Sbjct: 1129 KQTPEGKVDRYKARLVAKGYS 1149


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/81 (61%), Positives = 60/81 (74%)
 Frame = -2

Query: 245  FQASLSLVDIPRTVAETLAQPHWKAAMLEELHALEVNNTWVLVSLPPGRRAVGCKWVFTV 66
            F  SL    IP  V E L+ P W+ AM+EE+ AL+ N+TW LVS P G++A+GCKWVF V
Sbjct: 1400 FITSLESTSIPNYVHEALSHPRWQNAMIEEMTALDDNDTWDLVSRPAGKKAIGCKWVFAV 1459

Query: 65   KQNPDGTVSRYKARLVAKGYA 3
            K NPDGTV+R KARLVAKGYA
Sbjct: 1460 KMNPDGTVTRLKARLVAKGYA 1480



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = -2

Query: 179  WKAAMLEELHALEVNNTWVLVSLPPGRRAVGCKWVFTVKQNPDGTVSRYKARLVAKGY 6
            W+ AM+EE+ A+E   TW +VS+P     VG KWV+ VK  PDGT+ RYKARLVAKGY
Sbjct: 1549 WRKAMVEEIEAMERTKTWTIVSIPKDHHTVGSKWVYKVKCKPDGTIDRYKARLVAKGY 1606


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