BLASTX nr result

ID: Coptis23_contig00016307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016307
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-12
ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243...    76   1e-11
ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_002513029.1| protein with unknown function [Ricinus commu...    71   3e-10
ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    67   7e-09

>ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|222854862|gb|EEE92409.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 51/118 (43%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = -1

Query: 582 VVYISNPMKVKTSASDFRALVQELTGQDSDIGDASRYSEMEGINE--GVVLGTVPSEGME 409
           VVYISNPMK K SAS+FRALVQELTGQDS++ D S++ + +G +   G    TVP+    
Sbjct: 33  VVYISNPMKFKASASEFRALVQELTGQDSELPDPSKFVDSDGHDRDVGGNYQTVPNASKS 92

Query: 408 ISNDREEVVQHVPGVEPYGETIRTLDSTFEQFEPFDRVFSPFMIENFNGLIPSGLLHD 235
           +  D     Q VP  +P        D+ FE    FD VF P M+E+ +  +PS L ++
Sbjct: 93  VVVDGGH-AQEVPIEDPSQVQPERQDAPFES---FDDVFMPQMLEDISEKMPSKLWYE 146


>ref|XP_003632740.1| PREDICTED: uncharacterized protein LOC100243497 [Vitis vinifera]
          Length = 143

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 47/116 (40%), Positives = 66/116 (56%)
 Frame = -1

Query: 582 VVYISNPMKVKTSASDFRALVQELTGQDSDIGDASRYSEMEGINEGVVLGTVPSEGMEIS 403
           VVYI NP  VK   S+FRALVQELTGQD+DI D + + E+  +        VP    +++
Sbjct: 28  VVYIGNPRMVKVKESEFRALVQELTGQDADISDPTVFEEIHDVGGN---QKVP----DVA 80

Query: 402 NDREEVVQHVPGVEPYGETIRTLDSTFEQFEPFDRVFSPFMIENFNGLIPSGLLHD 235
           N+  E+   VP V+   E  +  D   EQ    D VF+P ++ENF GL+ S L ++
Sbjct: 81  NNENELELDVPPVDRGDEPPQMSDIPMEQ---LDDVFTPQLLENFTGLLQSTLWYE 133


>ref|XP_002322621.1| predicted protein [Populus trichocarpa] gi|222867251|gb|EEF04382.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 47/111 (42%), Positives = 60/111 (54%)
 Frame = -1

Query: 582 VVYISNPMKVKTSASDFRALVQELTGQDSDIGDASRYSEMEGINEGVVLGTVPSEGMEIS 403
           VVYISNPMK K SAS FRALVQELTGQDS++ D ++  + +    G    TV +    + 
Sbjct: 31  VVYISNPMKFKISASGFRALVQELTGQDSELPDPTKIVDDDDHGVGGNYRTVSNASKTVV 90

Query: 402 NDREEVVQHVPGVEPYGETIRTLDSTFEQFEPFDRVFSPFMIENFNGLIPS 250
           +D       VP  +P  E           F  FD VF P M+EN  G++PS
Sbjct: 91  DD--HCALEVPTKDPSQEQPPARQDA--PFGSFDDVFMPQMLENVAGIMPS 137


>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 50/121 (41%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
 Frame = -1

Query: 582 VVYISNPMKVKTSASDFRALVQELTGQDSDIGDASRYSEMEGINEGVVLGTVPSEGMEIS 403
           VVYIS+PMKV+TSAS FRALVQELTG+DS   DA+R+ ++    E     T P      S
Sbjct: 24  VVYISSPMKVETSASKFRALVQELTGKDS---DAARFMDVNNGAENYSTETTPDRSRAAS 80

Query: 402 NDREEVVQHVPGVEPYGET--IRTLDSTFEQFEPFDRVFSPFMIENFNGLIPSGLLHDIC 229
           ++   V+  +P +  Y E     + DS    F+PFDR F P M  +F  +  S   H+  
Sbjct: 81  DEHGSVL--LPLMSSYNEPSFSSSPDSDSSIFDPFDR-FLPPMEGSFMSMFQSNFPHESF 137

Query: 228 Q 226
           Q
Sbjct: 138 Q 138


>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
 Frame = -1

Query: 582 VVYISNPMKVKTSASDFRALVQELTGQDSDIGDASRYSEMEGINEGVVLGTVPSEGMEIS 403
           VVYIS+PMKVKTSAS FRALVQELTG+DS   DA R+ ++ G            + +EI 
Sbjct: 25  VVYISSPMKVKTSASKFRALVQELTGKDS---DAERFMDINGAR----------DSLEIP 71

Query: 402 NDREEVVQHVPGVEPYGETIRTLDSTFEQFEPF----DRVFSPFMIENFNGLIPSGLLHD 235
           +   E   H P V P   +      +    E F    D  F P M  +F G++   L H+
Sbjct: 72  HQTAE-YDHHPSVFPLTNSCNDQSPSTTSSESFLGSLDGEFFPSMEGSFMGMLQPSLFHE 130

Query: 234 ICQ 226
             Q
Sbjct: 131 SFQ 133


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