BLASTX nr result
ID: Coptis23_contig00016293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00016293
(1009 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95236.1| AT hook motif-containing protein, putative, expre... 157 2e-55
gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza... 157 2e-55
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza... 156 6e-55
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group] 155 1e-54
gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group] 155 1e-53
>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 1682
Score = 157 bits (398), Expect(2) = 2e-55
Identities = 70/119 (58%), Positives = 96/119 (80%)
Frame = -1
Query: 373 FRENIRAYNMMFAFTSMGGKIDRKINNGGGPYVFKLGGQNHHKIGSLLPIPGTKPKFAQL 194
+ +NIR YN MFAFTSMGGK+DR+INNG GPYVF++ GQN+H+IG+LLP G KP++AQL
Sbjct: 351 YMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDKPRWAQL 410
Query: 193 YIYDTQNEVDNRINALSEAENSKTLDREVIEGLIKILDKENDLTKVFRMAIERFKESEF 17
YIYDT+NEV NRI+A + + N +++D ++ GL +LD+EN L + FRMA +RFKE ++
Sbjct: 411 YIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDY 469
Score = 85.5 bits (210), Expect(2) = 2e-55
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -3
Query: 584 WNFGGPTCVCRHCGAIMWYEERTIRSKQPLNPKFSLCCQDGKVKLALLKETPRFLNQLLD 405
WNFG PTC C+HCGA+ WYEERT R K P FSLCC+ GKV L LK+ P +L+ L+
Sbjct: 283 WNFGKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMC 341
Query: 404 CNGGPRSAN 378
G RS N
Sbjct: 342 KEKGKRSRN 350
>gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 1618
Score = 157 bits (398), Expect(2) = 2e-55
Identities = 70/119 (58%), Positives = 96/119 (80%)
Frame = -1
Query: 373 FRENIRAYNMMFAFTSMGGKIDRKINNGGGPYVFKLGGQNHHKIGSLLPIPGTKPKFAQL 194
+ +NIR YN MFAFTSMGGK+DR+INNG GPYVF++ GQN+H+IG+LLP G KP++AQL
Sbjct: 351 YMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDKPRWAQL 410
Query: 193 YIYDTQNEVDNRINALSEAENSKTLDREVIEGLIKILDKENDLTKVFRMAIERFKESEF 17
YIYDT+NEV NRI+A + + N +++D ++ GL +LD+EN L + FRMA +RFKE ++
Sbjct: 411 YIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDY 469
Score = 85.5 bits (210), Expect(2) = 2e-55
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -3
Query: 584 WNFGGPTCVCRHCGAIMWYEERTIRSKQPLNPKFSLCCQDGKVKLALLKETPRFLNQLLD 405
WNFG PTC C+HCGA+ WYEERT R K P FSLCC+ GKV L LK+ P +L+ L+
Sbjct: 283 WNFGKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMC 341
Query: 404 CNGGPRSAN 378
G RS N
Sbjct: 342 KEKGKRSRN 350
>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 1682
Score = 156 bits (394), Expect(2) = 6e-55
Identities = 69/119 (57%), Positives = 96/119 (80%)
Frame = -1
Query: 373 FRENIRAYNMMFAFTSMGGKIDRKINNGGGPYVFKLGGQNHHKIGSLLPIPGTKPKFAQL 194
+ +NIR YN MFAFTSMGGK+DR+INNG GPYVF++ GQN+H+IG+LLP G KP++AQL
Sbjct: 351 YMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDKPRWAQL 410
Query: 193 YIYDTQNEVDNRINALSEAENSKTLDREVIEGLIKILDKENDLTKVFRMAIERFKESEF 17
YIYDT+NEV NRI+A + + N +++D ++ GL +LD+EN L + FR+A +RFKE ++
Sbjct: 411 YIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRIARDRFKEGDY 469
Score = 85.5 bits (210), Expect(2) = 6e-55
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -3
Query: 584 WNFGGPTCVCRHCGAIMWYEERTIRSKQPLNPKFSLCCQDGKVKLALLKETPRFLNQLLD 405
WNFG PTC C+HCGA+ WYEERT R K P FSLCC+ GKV L LK+ P +L+ L+
Sbjct: 283 WNFGKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMC 341
Query: 404 CNGGPRSAN 378
G RS N
Sbjct: 342 KEKGKRSRN 350
>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
Length = 1634
Score = 155 bits (392), Expect(2) = 1e-54
Identities = 69/119 (57%), Positives = 95/119 (79%)
Frame = -1
Query: 373 FRENIRAYNMMFAFTSMGGKIDRKINNGGGPYVFKLGGQNHHKIGSLLPIPGTKPKFAQL 194
+ +NIR YN MFAFTSMGGK+DR+INNG GPYVF++ GQN+H+I +LLP G KP++AQL
Sbjct: 303 YMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRISTLLPEEGDKPRWAQL 362
Query: 193 YIYDTQNEVDNRINALSEAENSKTLDREVIEGLIKILDKENDLTKVFRMAIERFKESEF 17
YIYDT+NEV NRI+A + + N +++D ++ GL +LD+EN L + FRMA +RFKE ++
Sbjct: 363 YIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDY 421
Score = 85.5 bits (210), Expect(2) = 1e-54
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -3
Query: 584 WNFGGPTCVCRHCGAIMWYEERTIRSKQPLNPKFSLCCQDGKVKLALLKETPRFLNQLLD 405
WNFG PTC C+HCGA+ WYEERT R K P FSLCC+ GKV L LK+ P +L+ L+
Sbjct: 235 WNFGKPTCTCQHCGALFWYEERT-RGKGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMC 293
Query: 404 CNGGPRSAN 378
G RS N
Sbjct: 294 KEKGKRSRN 302
>gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]
Length = 1517
Score = 155 bits (391), Expect(2) = 1e-53
Identities = 69/126 (54%), Positives = 94/126 (74%)
Frame = -1
Query: 394 DLDQQIKFRENIRAYNMMFAFTSMGGKIDRKINNGGGPYVFKLGGQNHHKIGSLLPIPGT 215
D + +++NIR+YN MFAFTSMGG +DRKINNG GPY+F+L GQNHH IG+LLP
Sbjct: 214 DGGRSTNYQQNIRSYNSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTLLPEGSN 273
Query: 214 KPKFAQLYIYDTQNEVDNRINALSEAENSKTLDREVIEGLIKILDKENDLTKVFRMAIER 35
KP+F QLY+YDT+NE++NRI A ++ LD++ I L+K+LD+ N L + FRMA +R
Sbjct: 274 KPRFQQLYVYDTENEIENRIEASKSGASNAPLDQKTIASLLKMLDENNTLAQTFRMARDR 333
Query: 34 FKESEF 17
FKE ++
Sbjct: 334 FKEDDY 339
Score = 82.0 bits (201), Expect(2) = 1e-53
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = -3
Query: 584 WNFGGPTCVCRHCGAIMWYEERTIRSKQPLNPKFSLCCQDGKVKLALLKETPRFLNQLLD 405
WNFGGPTC+C+HC A+MW+ ER++ S P F LCC+ GKV L LKE P +L LL
Sbjct: 154 WNFGGPTCMCQHCHALMWHAERSLHSTVK-QPSFGLCCKQGKVALPPLKEQPPYLTSLLT 212
Query: 404 CNGGPRSAN 378
+GG RS N
Sbjct: 213 RDGG-RSTN 220