BLASTX nr result

ID: Coptis23_contig00016277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016277
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01782.1| predicted protein [Hordeum vulgare subsp. vulgare]    370   e-100
gb|ADE76156.1| unknown [Picea sitchensis]                             367   3e-99
ref|NP_001058463.1| Os06g0697600 [Oryza sativa Japonica Group] g...   363   6e-98
ref|XP_003560507.1| PREDICTED: uncharacterized protein LOC100846...   357   3e-96
ref|XP_002437520.1| hypothetical protein SORBIDRAFT_10g028600 [S...   355   1e-95

>dbj|BAK01782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  370 bits (950), Expect = e-100
 Identities = 191/393 (48%), Positives = 277/393 (70%), Gaps = 21/393 (5%)
 Frame = +3

Query: 123  MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKRIISNSFTALQT-NVSIVIEEFE 299
            ME+ +DW+S+GSL+AT +  RTA+RDF+PP   Q+L+R+++   TA +    +I+I+E +
Sbjct: 1    MEMFLDWRSVGSLIATVMVFRTAMRDFIPPEAEQWLRRLLARLATAFRAPTATILIDEAD 60

Query: 300  SCLN--TNEIFEAVQTYLGTQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVK 473
               +  TN++++A Q YLG++C+++A  ++L KP        ++      +DTF+G +VK
Sbjct: 61   GASSGATNDLYDAAQLYLGSRCLAAAPAVRLYKPRQSDRAVASLPDAHTADDTFQGVRVK 120

Query: 474  WSSHC--VEKNI---------SMGGYSRSLENRYFKLSFHQKYKDKVHSSYIPYINEVAQ 620
            W+S    VE+           S GG S   ++R  +L F ++++D VH +YIP++ + A 
Sbjct: 121  WTSTARPVERGAGHNPYNVFGSRGGGSGG-DHRSLELQFPRQHRDFVHDTYIPHVIDEAT 179

Query: 621  RIKFKNKQRRIYTNKSSEEG--RYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKFVQ 794
            R++ K+++RR+YTN+++  G   + LW++  FSHPSTFDTLA+DP L+++I+ADL +F  
Sbjct: 180  RMRLKSRERRLYTNRAAAPGDDHHRLWTSHTFSHPSTFDTLAVDPALREEIRADLLRFAA 239

Query: 795  RSEYYNRVGRAWKRGYLIYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKLLI 974
            R E+Y RVGRAWKRGYL++GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS LR+LL+
Sbjct: 240  RREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRLLV 299

Query: 975  STSSKSVIVVEDIDCSLDLSDRVKEQ-NVEVNNTE----DEANSKKWNRRVKGTVSLSGV 1139
            ST+ KSV+VVEDIDCSLDLSDR K     + +N +      A +       + ++SLSGV
Sbjct: 300  STTPKSVVVVEDIDCSLDLSDRKKNSGGADEDNAQLAMLSPAAAAAMAAIGRESISLSGV 359

Query: 1140 LNFVDGLWSSCGGERLIIFTTNHKEKLDQALLR 1238
            LNFVDGLWSSC GERL+IFTTNH E+LD ALLR
Sbjct: 360  LNFVDGLWSSCVGERLMIFTTNHPERLDPALLR 392


>gb|ADE76156.1| unknown [Picea sitchensis]
          Length = 478

 Score =  367 bits (943), Expect = 3e-99
 Identities = 182/376 (48%), Positives = 265/376 (70%), Gaps = 10/376 (2%)
 Frame = +3

Query: 141  WKSLGSLLATFIFIRTALRDFLPPVVYQYLKRIISNSFTALQTNVSIVIEEFESCLNTNE 320
            W +LGS++A  IFIRT  +++LPP  Y +L + + +    + +++S+VIEE +  +  +E
Sbjct: 4    WSNLGSIMAAVIFIRTMAKEYLPPEFYGFLSKSLRSLIGIVSSHISVVIEENDG-MKVSE 62

Query: 321  IFEAVQTYLGTQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVKWSSHCVEKN 500
            ++EAVQTYL  +  S+A+ LKL KP + K  TF+M+ ++ + + +EG KV W  H  E+ 
Sbjct: 63   VYEAVQTYLSVRSCSAAKRLKLKKPQHNKEFTFSMARNEQIAEEYEGIKVWWVFHSSERK 122

Query: 501  --ISMGGYSRSLENRYFKLSFHQKYKDKVHSSYIPYINEVAQRIKFKNKQRRIYTNKSSE 674
              I     S S E RY+KL+FH+K+K  +   Y+P++   A+ ++ +++ R+IYTN+S+ 
Sbjct: 123  QQIMFSWNSTSEEKRYYKLTFHKKHKHIIFDQYLPHVMAEAKTLEIRSRYRKIYTNQSNS 182

Query: 675  ---EGRYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKFVQRSEYYNRVGRAWKRGYL 845
               E R  +W+ V F HP+TF TLA++P LK+DI  DL +F++  +YY +VGRAWKRGYL
Sbjct: 183  RDYEYRNRVWTPVVFDHPATFGTLALEPELKQDIMEDLQRFLRGEKYYRQVGRAWKRGYL 242

Query: 846  IYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKLLISTSSKSVIVVEDIDCSL 1025
            +YGPPGTGK+S+IAA+ANFL++DIYDLELT V +N++LRKLL +T++KS+IV+EDIDCSL
Sbjct: 243  LYGPPGTGKSSMIAAMANFLDYDIYDLELTQVKNNTELRKLLFTTTNKSIIVIEDIDCSL 302

Query: 1026 DLSDRVKEQNVEVNNTEDEANSK-----KWNRRVKGTVSLSGVLNFVDGLWSSCGGERLI 1190
            DLSDR K++  + +  EDE  SK     +        V+LSGVLNF DGLWS CG ERL 
Sbjct: 303  DLSDRKKKKKPQKDGEEDEKPSKPGKPDERESNEDSKVTLSGVLNFTDGLWSCCGSERLF 362

Query: 1191 IFTTNHKEKLDQALLR 1238
            +FTTNH ++LD ALLR
Sbjct: 363  VFTTNHVDRLDPALLR 378


>ref|NP_001058463.1| Os06g0697600 [Oryza sativa Japonica Group]
            gi|53793233|dbj|BAD54458.1| AAA-type ATPase-like [Oryza
            sativa Japonica Group] gi|113596503|dbj|BAF20377.1|
            Os06g0697600 [Oryza sativa Japonica Group]
            gi|125598369|gb|EAZ38149.1| hypothetical protein
            OsJ_22501 [Oryza sativa Japonica Group]
          Length = 504

 Score =  363 bits (931), Expect = 6e-98
 Identities = 184/394 (46%), Positives = 268/394 (68%), Gaps = 22/394 (5%)
 Frame = +3

Query: 123  MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKRIISNSFTALQTNV-SIVIEEFE 299
            ME+V+DW+S+GSLLAT +  RTA+RDFLPP    +L+R+++    A + +V +I+I+E +
Sbjct: 1    MEMVLDWRSVGSLLATIMVFRTAMRDFLPPEAEIFLRRLLTRLAAAFRPHVGTILIDEAD 60

Query: 300  SCLN-TNEIFEAVQTYLGTQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVKW 476
                  N++++A Q YLG +C+++A  ++L KP+       ++       D F G  VKW
Sbjct: 61   GASGGANDLYDASQLYLGARCLATAPTVRLHKPHQAPRPVASLPDAHTTHDVFRGVLVKW 120

Query: 477  SSHCVEKNISMGGYSRSLENRY--------------FKLSFHQKYKDKVHSSYIPYINEV 614
            ++  VE+  S GG    + N Y               +L F +++++ +H  YI ++ + 
Sbjct: 121  TARPVERGASAGGGGGGVFNPYNPYGRGGGGGEPRRLELQFPRQHRELIHGHYIQHVIDE 180

Query: 615  AQRIKFKNKQRRIYTNKSSEEG--RYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTKF 788
            A +++ ++++RR+YTN+++  G   + LW++  FSHPSTFDTLA+DP L+ DI+ADL +F
Sbjct: 181  ATKMRLRSRERRLYTNRAAAPGDDHHRLWTSHAFSHPSTFDTLAVDPALRDDIRADLLRF 240

Query: 789  VQRSEYYNRVGRAWKRGYLIYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRKL 968
              R E+Y RVGRAWKRGYL++GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS LR+L
Sbjct: 241  AARREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRL 300

Query: 969  LISTSSKSVIVVEDIDCSLDLSDRVKEQNVEVNNTE----DEANSKKWNRRVKGTVSLSG 1136
            L+ST+ KSV+VVEDIDCSLDLSDR  + + + N  +      A +       + ++SLSG
Sbjct: 301  LVSTTPKSVVVVEDIDCSLDLSDRKNKASDDENAAQLSIISPAAAAAMAAMGRESISLSG 360

Query: 1137 VLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLR 1238
            VLNFVDGLWSSC GERL++FTTNH E+LD ALLR
Sbjct: 361  VLNFVDGLWSSCVGERLMVFTTNHPERLDPALLR 394


>ref|XP_003560507.1| PREDICTED: uncharacterized protein LOC100846466 [Brachypodium
            distachyon]
          Length = 667

 Score =  357 bits (917), Expect = 3e-96
 Identities = 189/401 (47%), Positives = 269/401 (67%), Gaps = 29/401 (7%)
 Frame = +3

Query: 123  MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKRIISNSFTALQTNVSIV-IEEFE 299
            ME+V+DW+S+GSL+AT +  RTALRD +PP   ++L+ +++    A +  +  + I+E +
Sbjct: 1    MEMVLDWRSVGSLIATAMVFRTALRDLIPPEAERWLRLLVARVAAAFRGPLGTIHIDEAD 60

Query: 300  SCLNT----NEIFEAVQTYLGTQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFK 467
                     N++++A Q YLG++C+++A  ++L KP    +   ++       DTF G +
Sbjct: 61   HGATAGGAANDLYDAAQLYLGSRCLATAPAVRLYKPRQASHAVASLPDAHTTTDTFRGVR 120

Query: 468  VKWSSHCVEKNI------------SMGGYSRSLENRYFKLSFHQKYKDKVHSSYIPYINE 611
            VKW+S     N             S  G S  +E R  +L+F +++++ VH  YI ++  
Sbjct: 121  VKWTSTARPANNNNPNPYNPFARGSSSGGSSGVEQRSLELTFPRQHRELVHEQYIEHVIG 180

Query: 612  VAQRIKFKNKQRRIYTNKSSEEG-----RYGLWSNVPFSHPSTFDTLAIDPVLKKDIKAD 776
            VA  ++ K+++RR+YTN+++  G       GLW++  F+HPSTF TLA+DP L+ +I+AD
Sbjct: 181  VATTMRLKSRERRLYTNRATSPGDEHHSHRGLWTSHAFAHPSTFGTLAVDPALRDEIRAD 240

Query: 777  LTKFVQRSEYYNRVGRAWKRGYLIYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQ 956
            LT+F  R E+Y RVGRAWKRGYL++GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS 
Sbjct: 241  LTRFAGRREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSH 300

Query: 957  LRKLLISTSSKSVIVVEDIDCSLDLSDRVKEQNVEVNNTEDE-------ANSKKWNRRVK 1115
            LR+LL+ST+ KSVIVVEDIDCSLDLSDR K++N   NNT +E       A +       +
Sbjct: 301  LRRLLVSTTPKSVIVVEDIDCSLDLSDRNKKKN---NNTANEDTAILSPAAAMAAAAVGR 357

Query: 1116 GTVSLSGVLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLR 1238
             ++SLSGVLNFVDGLWSSC GERL+IFTTNH E+LD ALLR
Sbjct: 358  ESISLSGVLNFVDGLWSSCVGERLMIFTTNHPERLDPALLR 398


>ref|XP_002437520.1| hypothetical protein SORBIDRAFT_10g028600 [Sorghum bicolor]
            gi|241915743|gb|EER88887.1| hypothetical protein
            SORBIDRAFT_10g028600 [Sorghum bicolor]
          Length = 504

 Score =  355 bits (912), Expect = 1e-95
 Identities = 187/394 (47%), Positives = 266/394 (67%), Gaps = 22/394 (5%)
 Frame = +3

Query: 123  MELVMDWKSLGSLLATFIFIRTALRDFLPPVVYQYLKRIISNSFTALQT-NVSIVIEEFE 299
            ME+V+DW+SLGSLLAT +  RTALRDFLPP     L+R I+    A +    +I+I+E +
Sbjct: 1    MEMVLDWRSLGSLLATVVVFRTALRDFLPPEAEALLRRFIAWVAAAFRPPRDTILIDEAD 60

Query: 300  SCLN-TNEIFEAVQTYLGTQCISSARVLKLSKPNNFKNLTFTMSTDQIVEDTFEGFKVKW 476
                  N+++++ Q YLG +C+++A  ++L KP        ++       DTF G +VKW
Sbjct: 61   GPTGGANDLYDSAQLYLGARCLATAPTVRLHKPRQSPRPVASLPDSHTTHDTFRGVQVKW 120

Query: 477  SS--HCVEKNISMGG---YSRSL----------ENRYFKLSFHQKYKDKVHSSYIPYINE 611
            +S    V++    GG   Y              + R  +L F ++++D +H  YIP++ +
Sbjct: 121  TSTARAVDRGSGGGGGGGYGNPYNMFGRGGHGGDQRGLELQFPRQHRDLIHHHYIPHLID 180

Query: 612  VAQRIKFKNKQRRIYTNKSSEEG--RYGLWSNVPFSHPSTFDTLAIDPVLKKDIKADLTK 785
             A R++ K+++RR+YTN+++  G   + LW++  FSHPSTFDTLA+DP L+++I+ADL +
Sbjct: 181  EATRMRLKSRERRLYTNRATGPGDDHHRLWTSHAFSHPSTFDTLALDPTLREEIRADLLR 240

Query: 786  FVQRSEYYNRVGRAWKRGYLIYGPPGTGKTSLIAAVANFLEFDIYDLELTAVASNSQLRK 965
            F  R ++Y RVGRAWKRGYL++GPPGTGKTSL+AA+AN LEFD+YDLELT V +NS LR+
Sbjct: 241  FAARRDHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRR 300

Query: 966  LLISTSSKSVIVVEDIDCSLDLSDRVKEQNVEVN---NTEDEANSKKWNRRVKGTVSLSG 1136
            LL+ST+ KSV+VVEDIDCSLDLSDR K++         +   A +       + ++SLSG
Sbjct: 301  LLVSTTPKSVVVVEDIDCSLDLSDRNKKKKKGAQLAVMSMSPAAAAAMAVMGRESISLSG 360

Query: 1137 VLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLR 1238
            VLNFVDGLWSSC GERL++FTTNH E+LD+ALLR
Sbjct: 361  VLNFVDGLWSSCVGERLMVFTTNHPERLDRALLR 394


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