BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016243
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   237   4e-60
emb|CBI20604.3| unnamed protein product [Vitis vinifera]              237   4e-60
ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containin...   236   6e-60
gb|ACU23866.1| unknown [Glycine max]                                  236   8e-60
ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   235   1e-59

>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  237 bits (604), Expect = 4e-60
 Identities = 134/271 (49%), Positives = 159/271 (58%), Gaps = 53/271 (19%)
 Frame = +3

Query: 99  LDMFETDEFRMYEFKVRRCANNRPHDWTVCPFAHPGEKALRRDPRKYYYSGNPCPEFRKG 278
           +D +  D FRMYEFKVRRCA  R HDWT CP+AHPGEKA RRDPRK++YSG  CPEFRK 
Sbjct: 77  VDAYSCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGAACPEFRK- 135

Query: 279 GECKKGNACEYAHGVFECWLHPARYRSQLCKASSRCRRRVCFFAHSHEQLRVTIPAESLK 458
           G CKKG+ CE+AHGVFECWLHPARYR+Q CK  + CRRRVCFFAH+ EQLRV +P +S +
Sbjct: 136 GNCKKGDTCEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRV-LPMQSPR 194

Query: 459 QL--SYDSCEGSTL----------------VSPPYSPLSGSNSIDEMDFMLSNMR----- 569
               S +S +GS +                +SPP SP   S SI+EM   L N++     
Sbjct: 195 SAANSSESYDGSPMRQMMSPAAFMSSPAASLSPPESP-PVSPSINEMVASLRNLQLGKMK 253

Query: 570 -----------------------------LPADFNSNRIRSGIQVEDLWSRGCLVEEPVM 662
                                        LP       +RSG+   D W + C  EEPVM
Sbjct: 254 SMPQSRNVSVGSPGYGSPRGSVLRPGFCSLPTTPTQQPVRSGVNCFDFWDQSC-EEEPVM 312

Query: 663 ERVESGRNLRAAIFEKLSKRNSF-GRGHSPG 752
           ERVESGR +RA +FEKLSK NS  G G   G
Sbjct: 313 ERVESGRGIRAKMFEKLSKENSLEGSGTGSG 343


>emb|CBI20604.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  237 bits (604), Expect = 4e-60
 Identities = 126/239 (52%), Positives = 150/239 (62%), Gaps = 17/239 (7%)
 Frame = +3

Query: 84  DSSILLDMFETDEFRMYEFKVRRCANNRPHDWTVCPFAHPGEKALRRDPRKYYYSGNPCP 263
           +S  ++D F  D+FRM+EFKVRRCA  R HDWT CP+AHPGEKA RRDPRK++YSG  CP
Sbjct: 57  ESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACP 116

Query: 264 EFRKGGECKKGNACEYAHGVFECWLHPARYRSQLCKASSRCRRRVCFFAHSHEQLRVTIP 443
           EFRKG  CKKG++CE+AHGVFECWLHPARYR+Q CK  S CRRRVCFFAH+ EQLRV   
Sbjct: 117 EFRKGN-CKKGDSCEFAHGVFECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQ 175

Query: 444 AESLKQLSYDSCEGSTL--------------VSPPYSPL---SGSNSIDEMDFMLSNMRL 572
                  S +S +GS L              +SP    +   SG  S            L
Sbjct: 176 QSPRNHGSAESYDGSPLRLAFDPNLQVGKAKMSPQSWGVQMGSGFGSPRGSTLRPGFCSL 235

Query: 573 PADFNSNRIRSGIQVEDLWSRGCLVEEPVMERVESGRNLRAAIFEKLSKRNSFGRGHSP 749
           P+       RSG+   D+W + C  EEP MERVESGR+LRA I+ K+SK NS  R  SP
Sbjct: 236 PSTPTRTPARSGLGGLDVWDKTC-EEEPAMERVESGRDLRARIYAKISKENSLDRDSSP 293


>ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 350

 Score =  236 bits (602), Expect = 6e-60
 Identities = 125/264 (47%), Positives = 157/264 (59%), Gaps = 47/264 (17%)
 Frame = +3

Query: 99  LDMFETDEFRMYEFKVRRCANNRPHDWTVCPFAHPGEKALRRDPRKYYYSGNPCPEFRKG 278
           +D +  D FRMYEFKVRRCA  R HDWT CP+AHPGEKA RRDPR+++YSG  CPEFRKG
Sbjct: 79  VDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRRFHYSGVACPEFRKG 138

Query: 279 GECKKGNACEYAHGVFECWLHPARYRSQLCKASSRCRRRVCFFAHSHEQLRVTIPAES-- 452
             C+KG+ACE+AHGVFECWLHPARYR+Q CK  + CRRRVCFFAH+ EQLRV +P +S  
Sbjct: 139 N-CRKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRV-LPMQSPR 196

Query: 453 -------------LKQLSYDSCEGSTLVSPPYSPLSGSNSIDEMDFMLSNMR-------- 569
                        ++Q+S  S   +  +S P + LS   S   ++ M++++R        
Sbjct: 197 SVANSSESYDGSPMRQVSLSSAAAAAFMSSPAASLSPPESPPSVNEMVASLRNLQLGKMK 256

Query: 570 ------------------------LPADFNSNRIRSGIQVEDLWSRGCLVEEPVMERVES 677
                                   LP       +RSG++  D+W      EEPVMERVES
Sbjct: 257 SMPHNRNVSVGSPRGSVLRPGFLSLPTTPTQQPVRSGVKCFDVWDES-FEEEPVMERVES 315

Query: 678 GRNLRAAIFEKLSKRNSFGRGHSP 749
           GR +RA +FEKLSK NS     SP
Sbjct: 316 GRGIRAKMFEKLSKENSLDASASP 339


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  236 bits (601), Expect = 8e-60
 Identities = 139/299 (46%), Positives = 168/299 (56%), Gaps = 66/299 (22%)
 Frame = +3

Query: 84  DSSILLDMFETDEFRMYEFKVRRCANNRPHDWTVCPFAHPGEKALRRDPRKYYYSGNPCP 263
           +  + +D +  D FRM+EFKVRRCA  R HDWT CP+AHPGEKA RRDPRKY+YSG  CP
Sbjct: 62  EPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACP 121

Query: 264 EFRKGGECKKGNACEYAHGVFECWLHPARYRSQLCKASSRCRRRVCFFAHSHEQLRVTIP 443
           +FRK G CKKG+ACEYAHGVFECWLHPARYR+Q CK  + CRRRVCFFAH+ EQLRV +P
Sbjct: 122 DFRK-GSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRV-LP 179

Query: 444 AESLKQLSYDSCEGS----------------------------TLVSPPYSPLSGSNSID 539
            +S +  S DS +GS                             L SPP SP+  + S++
Sbjct: 180 QQSPR--SADSYDGSPLRHAIESSCAKTLAPAPFVSSPGSVSPPLESPPMSPM--TVSVN 235

Query: 540 EMDFMLSNMRL--------------PADFNSNR-------------------IRSGIQVE 620
           EM   L N++L              P+ F S R                    R G+   
Sbjct: 236 EMVASLRNLQLGKVKSLPSSWNVMGPSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYF 295

Query: 621 DLWSRGCLVEEPVMERVESGRNLRAAIFEKLSKRN-----SFGRGHSPGYVQAYSTELV 782
           D W + C  EEPVMERVESGRN+RA +F KLSK N      FG G        + +ELV
Sbjct: 296 DKWDQSC-EEEPVMERVESGRNIRARMFAKLSKENHLDGSDFGSGQIGDPDVGWVSELV 353


>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  235 bits (599), Expect = 1e-59
 Identities = 133/275 (48%), Positives = 160/275 (58%), Gaps = 61/275 (22%)
 Frame = +3

Query: 84  DSSILLDMFETDEFRMYEFKVRRCANNRPHDWTVCPFAHPGEKALRRDPRKYYYSGNPCP 263
           +  + +D +  D FRM+EFKVRRCA  R HDWT CP+AHPGEKA RRDPRKY+YSG  CP
Sbjct: 62  EPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACP 121

Query: 264 EFRKGGECKKGNACEYAHGVFECWLHPARYRSQLCKASSRCRRRVCFFAHSHEQLRVTIP 443
           +FRK G CKKG+ACEYAHGVFECWLHPARYR+Q CK  + CRRRVCFFAH+ EQLRV +P
Sbjct: 122 DFRK-GSCKKGDACEYAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRV-LP 179

Query: 444 AESLKQLSYDSCEGS----------------------------TLVSPPYSPLSGSNSID 539
            +S +  S DS +GS                             L SPP SP+  + S++
Sbjct: 180 QQSPR--SADSYDGSPLRHAIESSCAKTLAPAPFVSSPGSVSPPLESPPMSPM--TVSVN 235

Query: 540 EMDFMLSNMRL--------------PADFNSNR-------------------IRSGIQVE 620
           EM   L N++L              P+ F S R                    R G+   
Sbjct: 236 EMVASLRNLQLGKVKSLPSSWNVMGPSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYF 295

Query: 621 DLWSRGCLVEEPVMERVESGRNLRAAIFEKLSKRN 725
           D W + C  EEPVMERVESGRN+RA +F KLSK N
Sbjct: 296 DKWDQSC-EEEPVMERVESGRNIRARMFAKLSKEN 329