BLASTX nr result

ID: Coptis23_contig00016222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016222
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516563.1| conserved hypothetical protein [Ricinus comm...   149   3e-34
ref|XP_002324242.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002284095.2| PREDICTED: uncharacterized protein LOC100244...   145   3e-33
emb|CBI20883.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002308614.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32

>ref|XP_002516563.1| conserved hypothetical protein [Ricinus communis]
           gi|223544383|gb|EEF45904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 530

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/137 (54%), Positives = 89/137 (64%), Gaps = 4/137 (2%)
 Frame = +3

Query: 96  DALRQAFMPKHEYETLREEEKAWNRLQRPIITSXXXXXXXXXXXXXXXXXXXXFPNHQGK 275
           DALRQAFMPKHEYE+LREE+KAW +LQRP++ S                    FP   GK
Sbjct: 6   DALRQAFMPKHEYESLREEDKAWIKLQRPVLVSILAAICFLILVCTIVSLKIVFPGDSGK 65

Query: 276 RPFCNDASLLHPLSINLTATVDS----GAFYLTEKEAADFFWMVVFLPSSIIFFASLIYL 443
           RPFC+D  L  PL IN+    DS    GAFYLT++E  D++WMVVF+PS +IF  S  YL
Sbjct: 66  RPFCSDRRL-QPLQINMKGGGDSDLFPGAFYLTDQETVDYYWMVVFIPSLVIFLISAAYL 124

Query: 444 IAGIFVAYSAPVRHGCL 494
            AG+ VAYSAP RHGCL
Sbjct: 125 CAGLTVAYSAPARHGCL 141


>ref|XP_002324242.1| predicted protein [Populus trichocarpa] gi|222865676|gb|EEF02807.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/137 (54%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
 Frame = +3

Query: 93  SDALRQAFMPKHEYETLREEEKAWNRLQRPIITSXXXXXXXXXXXXXXXXXXXXFPNHQG 272
           SDALRQAFMPKHEYE LREE+KAW +LQRP++ S                    FP   G
Sbjct: 5   SDALRQAFMPKHEYECLREEDKAWTKLQRPLLISTVGIICLVIFVSTTVSFKIVFPGDSG 64

Query: 273 KRPFCNDASLLHPLSINLTATVD--SGAFYLTEKEAADFFWMVVFLPSSIIFFASLIYLI 446
           KRPFC+  + L PL I      D   GAFYLT++E  D++WMVVF+PS I+F ASL YL+
Sbjct: 65  KRPFCS-GNRLQPLPIKHGGNSDLFPGAFYLTDQETVDYYWMVVFVPSGIVFLASLAYLV 123

Query: 447 AGIFVAYSAPVRHGCLR 497
           AG+ VAYSAP RHGCL+
Sbjct: 124 AGMNVAYSAPARHGCLK 140


>ref|XP_002284095.2| PREDICTED: uncharacterized protein LOC100244114 isoform 1 [Vitis
           vinifera]
          Length = 301

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 4/138 (2%)
 Frame = +3

Query: 96  DALRQAFMPKHEYETLREEEKAWNRLQRPIITSXXXXXXXXXXXXXXXXXXXXFPNHQGK 275
           DALRQAFMPKHEY+ LREE+KAW  LQRP++                      FP +  K
Sbjct: 6   DALRQAFMPKHEYDALREEDKAWIHLQRPLLICSLAIVTFAIVISTVISLNIVFPGNSAK 65

Query: 276 RPFCNDASLLHPLSINLTATVDS----GAFYLTEKEAADFFWMVVFLPSSIIFFASLIYL 443
           RPFC D  L   LS++     DS    GAFYLT++E AD++WMVVF+PS +IFFAS +YL
Sbjct: 66  RPFCGDPRL-QQLSVSAAKGGDSDLFPGAFYLTDQETADYYWMVVFIPSMLIFFASSVYL 124

Query: 444 IAGIFVAYSAPVRHGCLR 497
           +AG+ VAYSAP RHGCL+
Sbjct: 125 LAGMTVAYSAPTRHGCLK 142


>emb|CBI20883.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 4/138 (2%)
 Frame = +3

Query: 96  DALRQAFMPKHEYETLREEEKAWNRLQRPIITSXXXXXXXXXXXXXXXXXXXXFPNHQGK 275
           DALRQAFMPKHEY+ LREE+KAW  LQRP++                      FP +  K
Sbjct: 6   DALRQAFMPKHEYDALREEDKAWIHLQRPLLICSLAIVTFAIVISTVISLNIVFPGNSAK 65

Query: 276 RPFCNDASLLHPLSINLTATVDS----GAFYLTEKEAADFFWMVVFLPSSIIFFASLIYL 443
           RPFC D  L   LS++     DS    GAFYLT++E AD++WMVVF+PS +IFFAS +YL
Sbjct: 66  RPFCGDPRL-QQLSVSAAKGGDSDLFPGAFYLTDQETADYYWMVVFIPSMLIFFASSVYL 124

Query: 444 IAGIFVAYSAPVRHGCLR 497
           +AG+ VAYSAP RHGCL+
Sbjct: 125 LAGMTVAYSAPTRHGCLK 142


>ref|XP_002308614.1| predicted protein [Populus trichocarpa] gi|222854590|gb|EEE92137.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/137 (54%), Positives = 89/137 (64%), Gaps = 2/137 (1%)
 Frame = +3

Query: 93  SDALRQAFMPKHEYETLREEEKAWNRLQRPIITSXXXXXXXXXXXXXXXXXXXXFPNHQG 272
           SDALRQAFMPKHEYE+LREE++AW +LQRP+  S                    FP   G
Sbjct: 5   SDALRQAFMPKHEYESLREEDRAWVKLQRPLWISTVGTICLVIFVSTTVSLKIVFPGDNG 64

Query: 273 KRPFCNDASLLHPLSINLTATVD--SGAFYLTEKEAADFFWMVVFLPSSIIFFASLIYLI 446
           KRPFCN  + L PL I      D   GAFYLT++E  D++WMVVF+PS I+F ASL YL+
Sbjct: 65  KRPFCN-GNRLQPLPIKNGGDSDLFPGAFYLTDQETVDYYWMVVFVPSMIVFLASLAYLV 123

Query: 447 AGIFVAYSAPVRHGCLR 497
           AG+ VA SAP RHGCL+
Sbjct: 124 AGMNVACSAPARHGCLK 140


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