BLASTX nr result

ID: Coptis23_contig00016215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016215
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273745.2| PREDICTED: uncharacterized protein LOC100255...   385   e-104
ref|XP_004148171.1| PREDICTED: uncharacterized protein LOC101220...   372   e-100
ref|XP_003600978.1| hypothetical protein MTR_3g071640 [Medicago ...   355   1e-95
ref|XP_002879864.1| hypothetical protein ARALYDRAFT_903321 [Arab...   333   4e-89
ref|NP_181562.4| uncharacterized protein [Arabidopsis thaliana] ...   330   6e-88

>ref|XP_002273745.2| PREDICTED: uncharacterized protein LOC100255420 [Vitis vinifera]
           gi|297736551|emb|CBI25422.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  385 bits (988), Expect = e-104
 Identities = 185/279 (66%), Positives = 213/279 (76%), Gaps = 2/279 (0%)
 Frame = +1

Query: 25  MAIRDDYIKWVILITILYRV--VTTNSVCELSVSHGDKLYNFSLASPTSKYPHGVLSEDG 198
           M I  D  +WV+++TIL+RV   + + VC LSV     LY FSLASPTSK+PHGVLSEDG
Sbjct: 1   MRIGGDLPRWVLILTILHRVSLFSASDVCRLSVLDRYNLYTFSLASPTSKFPHGVLSEDG 60

Query: 199 FYKVAGNGTVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTT 378
           FYKVA N TVLWFQLCDGMIFNHDPP C DC DCGGPS CGM CSALVAN + GY+VCTT
Sbjct: 61  FYKVAVNETVLWFQLCDGMIFNHDPPTCADCWDCGGPSRCGMDCSALVANNVKGYHVCTT 120

Query: 379 IGRSSSTKVNLIDEKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCD 558
           IGR+SS  +NLID+  P  GV VK+SS+G   NCSLSVSV C+SNG+QGP  LE  GTCD
Sbjct: 121 IGRASSVDINLIDKNIPKKGVTVKMSSNGPDVNCSLSVSVICESNGVQGPYSLEQSGTCD 180

Query: 559 YATVLRHPSGCAKTVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIP 738
           YAT +RHPSGCA+ VS+HG GLGWFST LII+ CF   YLL GT YR+F LG+RGV  IP
Sbjct: 181 YATEMRHPSGCAEIVSVHGRGLGWFSTFLIILFCFLGVYLLVGTVYRFFFLGVRGVDIIP 240

Query: 739 HLEVWLSLPHRIQGLFRSLIRRFRKPTQGHRSTYSPVNF 855
           +L  W SLP R Q    SL+R+FR P+QGHR +YS VNF
Sbjct: 241 NLGFWTSLPQRTQSSCASLVRKFRGPSQGHRDSYSAVNF 279


>ref|XP_004148171.1| PREDICTED: uncharacterized protein LOC101220308 [Cucumis sativus]
          Length = 281

 Score =  372 bits (955), Expect = e-100
 Identities = 173/281 (61%), Positives = 211/281 (75%), Gaps = 4/281 (1%)
 Frame = +1

Query: 25  MAIRDDYIKWV-ILITILYRVVTTNS---VCELSVSHGDKLYNFSLASPTSKYPHGVLSE 192
           M  R  ++KWV     IL++++  NS   +CE S+ +  K+YNF+LASPTSK+PHGVLSE
Sbjct: 1   MMRRIHFVKWVTFFFVILHQILPFNSAFSICEYSLVNNGKMYNFNLASPTSKFPHGVLSE 60

Query: 193 DGFYKVAGNGTVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVC 372
           DGFY+VA N TV+WFQLCDGMIFNHDPP C DC  CGGPSHCGMGC ALVAN + GY VC
Sbjct: 61  DGFYRVAVNNTVVWFQLCDGMIFNHDPPMCIDCLGCGGPSHCGMGCGALVANKIEGYDVC 120

Query: 373 TTIGRSSSTKVNLIDEKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGT 552
           TTIG   +T +++ID KNP  GV VK+S+      CSLSVSV C ++G+QGP +LE +G 
Sbjct: 121 TTIGLVQNTNISIIDIKNPDRGVAVKMSNIDTKVKCSLSVSVICTTDGIQGPQILEKIGP 180

Query: 553 CDYATVLRHPSGCAKTVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHA 732
           CDYAT LRHPSGCAK V +H  G G+F T  II+LC F  YLLAG  YRYF L +RGV  
Sbjct: 181 CDYATSLRHPSGCAKIVHVHRRGWGFFGTFTIIILCLFGGYLLAGIVYRYFVLKVRGVDV 240

Query: 733 IPHLEVWLSLPHRIQGLFRSLIRRFRKPTQGHRSTYSPVNF 855
           IP+LE WLSLPH+IQ LF SL+R+F+ P++GHR +YSPVNF
Sbjct: 241 IPNLEFWLSLPHKIQSLFASLVRKFKGPSRGHRDSYSPVNF 281


>ref|XP_003600978.1| hypothetical protein MTR_3g071640 [Medicago truncatula]
           gi|355490026|gb|AES71229.1| hypothetical protein
           MTR_3g071640 [Medicago truncatula]
          Length = 284

 Score =  355 bits (911), Expect = 1e-95
 Identities = 160/267 (59%), Positives = 199/267 (74%)
 Frame = +1

Query: 55  VILITILYRVVTTNSVCELSVSHGDKLYNFSLASPTSKYPHGVLSEDGFYKVAGNGTVLW 234
           V L++      T  + C+ S   G+KLYN++L+SP   +PHG+LSEDGFYKV+ N T LW
Sbjct: 18  VFLLSSSLSSATPTTACKFSFRDGNKLYNYTLSSPIRNFPHGILSEDGFYKVSVNQTTLW 77

Query: 235 FQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTKVNLI 414
           FQLCDGMIFNHDPP C DC DCGGP+ CGM C ALV+N +GGY+VC  IGR     +++I
Sbjct: 78  FQLCDGMIFNHDPPTCADCWDCGGPTRCGMECGALVSNNIGGYHVCAAIGRGPKIDIDVI 137

Query: 415 DEKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHPSGCA 594
           D+KNP +GV VK+SSS +  NCSL+VSV C+ NG+QGP  LE  G C+YAT L+HPSGCA
Sbjct: 138 DKKNPHVGVTVKMSSSSLKYNCSLAVSVLCNVNGVQGPQTLERSGDCNYATELKHPSGCA 197

Query: 595 KTVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSLPHRI 774
             V +HG+G GWF TLL+IVLC F AYLLAG  YRYF L IRG   IP+L++W SLP R 
Sbjct: 198 MIVHVHGSGWGWFGTLLVIVLCLFAAYLLAGIVYRYFFLKIRGTEVIPNLDLWTSLPRRT 257

Query: 775 QGLFRSLIRRFRKPTQGHRSTYSPVNF 855
           Q L  S++R+F+ P++GHRSTYSPVNF
Sbjct: 258 QSLCSSVVRKFKGPSEGHRSTYSPVNF 284


>ref|XP_002879864.1| hypothetical protein ARALYDRAFT_903321 [Arabidopsis lyrata subsp.
           lyrata] gi|297325703|gb|EFH56123.1| hypothetical protein
           ARALYDRAFT_903321 [Arabidopsis lyrata subsp. lyrata]
          Length = 276

 Score =  333 bits (855), Expect = 4e-89
 Identities = 155/271 (57%), Positives = 195/271 (71%)
 Frame = +1

Query: 43  YIKWVILITILYRVVTTNSVCELSVSHGDKLYNFSLASPTSKYPHGVLSEDGFYKVAGNG 222
           +I   ILIT++      NS CE S +  +K+++F+LAS    +PHGVLSEDGFY+V  N 
Sbjct: 6   WIPRFILITLVLSSFRVNSQCEFSFTGRNKVFDFNLASSIRNFPHGVLSEDGFYRVEANS 65

Query: 223 TVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTK 402
           TVLWFQLCD +IFNHDPPRC  C+DCGGPSHCG  CSALV+  + GY VCT++G +SSTK
Sbjct: 66  TVLWFQLCDVLIFNHDPPRCVGCEDCGGPSHCGTSCSALVSENVRGYDVCTSLGHASSTK 125

Query: 403 VNLIDEKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHP 582
           V++ID+++P  GV+VK+S      NCSLSVSV C  N + GP  L   GTC YAT LRHP
Sbjct: 126 VDIIDKEDPGKGVIVKMSGGDRNQNCSLSVSVICQKNKVDGPLTLAKSGTCHYATQLRHP 185

Query: 583 SGCAKTVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSL 762
           SGCA  +S H +G GWFSTLLII+LC F AYLL G  YRYFSLGIRG+  IP+++ W ++
Sbjct: 186 SGCAAAISGHSSGWGWFSTLLIIILCLFGAYLLGGAVYRYFSLGIRGIDVIPNVDYWATV 245

Query: 763 PHRIQGLFRSLIRRFRKPTQGHRSTYSPVNF 855
           PH +Q  F SL  RF   ++G R++YS VNF
Sbjct: 246 PHSVQSCFGSLFSRFGGSSRGQRTSYSQVNF 276


>ref|NP_181562.4| uncharacterized protein [Arabidopsis thaliana]
           gi|67848438|gb|AAY82252.1| hypothetical protein
           At2g40316 [Arabidopsis thaliana]
           gi|110743339|dbj|BAE99557.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254718|gb|AEC09812.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 276

 Score =  330 bits (845), Expect = 6e-88
 Identities = 153/271 (56%), Positives = 195/271 (71%)
 Frame = +1

Query: 43  YIKWVILITILYRVVTTNSVCELSVSHGDKLYNFSLASPTSKYPHGVLSEDGFYKVAGNG 222
           +I   ILIT+L+     NS CE S +  +K+++F+LAS    YPHGVLSEDGFYKV  N 
Sbjct: 6   WIPRFILITLLFISSRVNSQCEFSFTGRNKVFHFNLASSIRNYPHGVLSEDGFYKVEANS 65

Query: 223 TVLWFQLCDGMIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTK 402
           +VLWFQLCD +IFNHDPPRC  C+DCGGPSHCG  CSALV+  + GY VCT++G +SSTK
Sbjct: 66  SVLWFQLCDVLIFNHDPPRCVGCEDCGGPSHCGTSCSALVSENVRGYDVCTSLGHASSTK 125

Query: 403 VNLIDEKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHP 582
           V++ID+++P  GV+V++S+     NCSLSVSV C    + GP  L   GTC YAT LRHP
Sbjct: 126 VDIIDKEDPGKGVIVQMSTGNRNQNCSLSVSVICQKTKVDGPLTLAKSGTCQYATQLRHP 185

Query: 583 SGCAKTVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSL 762
           +GCA  +S H +G GWFSTLLII+LC F AYL+ G  YRYFSLGIRG+  IP+++ W ++
Sbjct: 186 AGCAAAISGHSSGWGWFSTLLIIILCLFGAYLVGGAVYRYFSLGIRGIDVIPNMDYWATV 245

Query: 763 PHRIQGLFRSLIRRFRKPTQGHRSTYSPVNF 855
           PH IQ  F SL  RF    +G +++YS VNF
Sbjct: 246 PHSIQSCFGSLFSRFGGSIRGQQTSYSQVNF 276


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