BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016208
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   252   3e-65
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              250   1e-64
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   250   1e-64
ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|6...   248   4e-64
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   245   2e-63

>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/165 (76%), Positives = 141/165 (85%)
 Frame = -1

Query: 497 FNVELTDEEGTQIQATMFNAAAQKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTL 318
           FNVEL D++GT+IQATMFN AA+KFYDKFE+GKVYYISKGTL++ANKQFKTVQNDYEMTL
Sbjct: 195 FNVELADQDGTEIQATMFNQAARKFYDKFELGKVYYISKGTLRVANKQFKTVQNDYEMTL 254

Query: 317 NXXXXXXXXXXXXXXVPETKFNFVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNN 138
           N              VPETKFNFV ID+L SYVNGRELVDVIGVVQNVS TMSIRRK NN
Sbjct: 255 NENSEVEEAINEAAFVPETKFNFVAIDELGSYVNGRELVDVIGVVQNVSSTMSIRRKSNN 314

Query: 137 EIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSSPIVA 3
           E++PKRDITIAD++KKTVVVSLW+D ATN+GQELLD  D SP+VA
Sbjct: 315 EMIPKRDITIADETKKTVVVSLWSDLATNVGQELLDMADKSPVVA 359


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  250 bits (638), Expect = 1e-64
 Identities = 124/165 (75%), Positives = 139/165 (84%)
 Frame = -1

Query: 497 FNVELTDEEGTQIQATMFNAAAQKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTL 318
           FNVELTDE+GTQIQATMFN AA+KFY+KF++GKVYYISKG LK+ANKQFKTVQNDYEMTL
Sbjct: 193 FNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTL 252

Query: 317 NXXXXXXXXXXXXXXVPETKFNFVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNN 138
           N              +PE KF FV+I++L  YVNG+ELVDVIGVVQ+VSPTMSIRRK NN
Sbjct: 253 NENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNN 312

Query: 137 EIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSSPIVA 3
           +IVPKRDITIAD +KKTVVVSLWNDHATN+GQELLD  D  PIVA
Sbjct: 313 DIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVA 357


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  250 bits (638), Expect = 1e-64
 Identities = 124/165 (75%), Positives = 139/165 (84%)
 Frame = -1

Query: 497 FNVELTDEEGTQIQATMFNAAAQKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTL 318
           FNVELTDE+GTQIQATMFN AA+KFY+KF++GKVYYISKG LK+ANKQFKTVQNDYEMTL
Sbjct: 216 FNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTL 275

Query: 317 NXXXXXXXXXXXXXXVPETKFNFVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNN 138
           N              +PE KF FV+I++L  YVNG+ELVDVIGVVQ+VSPTMSIRRK NN
Sbjct: 276 NENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNN 335

Query: 137 EIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSSPIVA 3
           +IVPKRDITIAD +KKTVVVSLWNDHATN+GQELLD  D  PIVA
Sbjct: 336 DIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVA 380


>ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
           gi|6562316|emb|CAB62614.1| replication factor A-like
           protein [Arabidopsis thaliana]
           gi|332003852|gb|AED91235.1| RPA70-kDa subunit B
           [Arabidopsis thaliana]
          Length = 604

 Score =  248 bits (633), Expect = 4e-64
 Identities = 122/165 (73%), Positives = 141/165 (85%)
 Frame = -1

Query: 497 FNVELTDEEGTQIQATMFNAAAQKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTL 318
           FNVELTDEEGTQIQATMFNAAA+KFYD+FEMGKVYYIS+G+LKLANKQFKTVQNDYEMTL
Sbjct: 195 FNVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTL 254

Query: 317 NXXXXXXXXXXXXXXVPETKFNFVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNN 138
           N               PETKFNFV ID+L +YVN ++L+DVIGVVQ+VSPTMSIRRK +N
Sbjct: 255 NENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDN 314

Query: 137 EIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSSPIVA 3
           E++PKRDIT+AD++KKTVVVSLWND AT IGQELLD  D+ P++A
Sbjct: 315 EMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIA 359


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  245 bits (626), Expect = 2e-63
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = -1

Query: 497 FNVELTDEEGTQIQATMFNAAAQKFYDKFEMGKVYYISKGTLKLANKQFKTVQNDYEMTL 318
           FNVELTDE+GTQIQATMFN AA+KFYDKF++GKVYYISKG+LK+ANKQF+TVQNDYEM L
Sbjct: 214 FNVELTDEDGTQIQATMFNEAARKFYDKFQLGKVYYISKGSLKVANKQFRTVQNDYEMNL 273

Query: 317 NXXXXXXXXXXXXXXVPETKFNFVQIDQLSSYVNGRELVDVIGVVQNVSPTMSIRRKLNN 138
           N              +PETKFNFV IDQL  YV+  ELVDVIGVVQ+VSPTMSIRRK NN
Sbjct: 274 NENSQVEEASDEAAFIPETKFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNN 333

Query: 137 EIVPKRDITIADDSKKTVVVSLWNDHATNIGQELLDTVDSSPIVA 3
           +IVPKRDITIAD++KKTVVVSLWND AT++GQELLD  D SP+VA
Sbjct: 334 DIVPKRDITIADETKKTVVVSLWNDLATDVGQELLDMADKSPVVA 378