BLASTX nr result

ID: Coptis23_contig00016207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016207
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic...   164   7e-39
ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic...   159   2e-37
emb|CBI28108.3| unnamed protein product [Vitis vinifera]              159   2e-37
emb|CAN70130.1| hypothetical protein VITISV_032861 [Vitis vinifera]   157   6e-37
ref|XP_004148712.1| PREDICTED: nudix hydrolase 20, chloroplastic...   149   2e-34

>ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic [Vitis vinifera]
           gi|297738865|emb|CBI28110.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = -2

Query: 300 WVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAGIPRSISKAAIPVGAISF 121
           W+GKRS VKPT+ G LDH+ AGG+PH ++C  N MKECEEEAGIPRS+SK A+PVGA+S+
Sbjct: 213 WIGKRSQVKPTYPGMLDHLVAGGLPHGIACKENVMKECEEEAGIPRSMSKEAVPVGAVSY 272

Query: 120 LDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIP 1
            DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIP
Sbjct: 273 GDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIP 312


>ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 364

 Score =  159 bits (403), Expect = 2e-37
 Identities = 71/100 (71%), Positives = 85/100 (85%)
 Frame = -2

Query: 300 WVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAGIPRSISKAAIPVGAISF 121
           W+GKRS VK T+ G LDH+ +GG+PH ++C  N MKECEEEAGIPRS+SK A+PVGA+S+
Sbjct: 213 WIGKRSQVKTTYPGMLDHLVSGGLPHGIACMENVMKECEEEAGIPRSMSKEAVPVGAVSY 272

Query: 120 LDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIP 1
            DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIP
Sbjct: 273 GDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIP 312


>emb|CBI28108.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  159 bits (403), Expect = 2e-37
 Identities = 71/100 (71%), Positives = 85/100 (85%)
 Frame = -2

Query: 300 WVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAGIPRSISKAAIPVGAISF 121
           W+GKRS VK T+ G LDH+ +GG+PH ++C  N MKECEEEAGIPRS+SK A+PVGA+S+
Sbjct: 241 WIGKRSQVKTTYPGMLDHLVSGGLPHGIACMENVMKECEEEAGIPRSMSKEAVPVGAVSY 300

Query: 120 LDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIP 1
            DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIP
Sbjct: 301 GDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIP 340


>emb|CAN70130.1| hypothetical protein VITISV_032861 [Vitis vinifera]
          Length = 448

 Score =  157 bits (398), Expect = 6e-37
 Identities = 73/106 (68%), Positives = 86/106 (81%), Gaps = 6/106 (5%)
 Frame = -2

Query: 300 WVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAGIPRSISKA------AIP 139
           W+GKRS VKPT+ G LDH+ AGG+PH ++C  N MKECEEEAGIPRS+SK       A+P
Sbjct: 262 WIGKRSQVKPTYPGMLDHLVAGGLPHGIACKENVMKECEEEAGIPRSMSKETCLTHRAVP 321

Query: 138 VGAISFLDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIP 1
           VGA+S+ DID YRYKR+VLFCYDLKL D F+P NQDGEVESF+LIP
Sbjct: 322 VGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIP 367


>ref|XP_004148712.1| PREDICTED: nudix hydrolase 20, chloroplastic-like [Cucumis sativus]
           gi|449519376|ref|XP_004166711.1| PREDICTED: nudix
           hydrolase 20, chloroplastic-like [Cucumis sativus]
          Length = 370

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/100 (69%), Positives = 78/100 (78%)
 Frame = -2

Query: 300 WVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAGIPRSISKAAIPVGAISF 121
           WV KRS  KPT+ G LDH+ AGG+P  + CG N MKEC+EEAGIPRSISK AIPVGAIS+
Sbjct: 219 WVAKRSQTKPTFPGMLDHLVAGGLPQGIPCGENLMKECQEEAGIPRSISKEAIPVGAISY 278

Query: 120 LDIDEYRYKREVLFCYDLKLSDGFVPYNQDGEVESFKLIP 1
            DI  Y YKR+V FCYDLKL + FVP NQDGEVE F L+P
Sbjct: 279 TDIKGYGYKRDVQFCYDLKLPESFVPENQDGEVEGFMLLP 318


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