BLASTX nr result

ID: Coptis23_contig00016188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016188
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   2e-11
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               67   2e-09
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    67   2e-09
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   2e-08
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    64   2e-08

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
 Frame = -3

Query: 513 IHAWNCRGMGSSTAVQNIKDLVRQHQSDILCLSETKVKEEKISKLGKTLKYDNMFCVPAV 334
           I +WNCRGMGS +A+  ++ L+      I+ LSETK+K  ++  + K LK+++M  V   
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 333 G----RRGGLAILWRTGVNLEVLGATANQI 256
           G    RRGGLA+LWR+ + ++V+  ++N I
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHI 93


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 27/75 (36%), Positives = 47/75 (62%)
 Frame = -3

Query: 504 WNCRGMGSSTAVQNIKDLVRQHQSDILCLSETKVKEEKISKLGKTLKYDNMFCVPAVGRR 325
           WNC+G+G    V+ +K++ R++  D++CLSETK + + +      L + N   VP++G  
Sbjct: 59  WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118

Query: 324 GGLAILWRTGVNLEV 280
           GGL +LW+  V++ V
Sbjct: 119 GGLVVLWKPSVHISV 133


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 26/75 (34%), Positives = 45/75 (60%)
 Frame = -3

Query: 504 WNCRGMGSSTAVQNIKDLVRQHQSDILCLSETKVKEEKISKLGKTLKYDNMFCVPAVGRR 325
           WNCRG+G+   V+ ++DL + +   ++ + ET++ + ++  L  TL +DN F V + GR 
Sbjct: 6   WNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRS 65

Query: 324 GGLAILWRTGVNLEV 280
           GGL + W   V L +
Sbjct: 66  GGLGLFWNNDVLLSI 80


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 51/93 (54%)
 Frame = -3

Query: 513 IHAWNCRGMGSSTAVQNIKDLVRQHQSDILCLSETKVKEEKISKLGKTLKYDNMFCVPAV 334
           I  WNCRG+G+  +V+ ++    Q   DI+ +SET + + ++  L   L + N F V +V
Sbjct: 3   ILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVASV 62

Query: 333 GRRGGLAILWRTGVNLEVLGATANQISGGQEMG 235
           GR GGL + W+  V   ++  + + I G  E G
Sbjct: 63  GRAGGLCLYWKEEVMFSLVSFSQHHICGDVEDG 95


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/76 (36%), Positives = 50/76 (65%)
 Frame = -3

Query: 507 AWNCRGMGSSTAVQNIKDLVRQHQSDILCLSETKVKEEKISKLGKTLKYDNMFCVPAVGR 328
           AWNCRG+G++  VQ+++ L+++  S ++ L ET+   EK+S+L + L +     V + G+
Sbjct: 640 AWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEGK 699

Query: 327 RGGLAILWRTGVNLEV 280
            GGLA+ W   V+++V
Sbjct: 700 SGGLALYWDESVSVDV 715


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