BLASTX nr result

ID: Coptis23_contig00016167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016167
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528288.1| PREDICTED: probable F-actin-capping protein ...    79   5e-13
ref|XP_003553769.1| PREDICTED: translational activator GCN1-like...    78   6e-13
ref|XP_003521781.1| PREDICTED: translational activator GCN1 [Gly...    78   8e-13
ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...    77   2e-12
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...    77   2e-12

>ref|XP_003528288.1| PREDICTED: probable F-actin-capping protein subunit beta-like
           [Glycine max]
          Length = 216

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/65 (61%), Positives = 51/65 (78%)
 Frame = -2

Query: 209 SICRLIISWSLGKFCQESLFNLVCDAISTSRNKELREKKGGPVLIPGFCLPKCLQPLLPI 30
           ++ R+IIS  + K    S   LV DA+STSR+KE R+KKGGP+LIPGFCLP+ LQP+LPI
Sbjct: 7   ALSRVIIS--VPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPILIPGFCLPEALQPILPI 64

Query: 29  FLQTA 15
           FLQT+
Sbjct: 65  FLQTS 69


>ref|XP_003553769.1| PREDICTED: translational activator GCN1-like [Glycine max]
          Length = 2870

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = -2

Query: 209  SICRLIISWSLGKFCQESLFNLVCDAISTSRNKELREKKGGPVLIPGFCLPKCLQPLLPI 30
            ++ R+IIS  + K    S   LV DA+STSR+KE R+KKGGPVLIPGFCLPK LQP+LPI
Sbjct: 2417 ALSRVIIS--VPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPILPI 2474

Query: 29   FLQ 21
            FLQ
Sbjct: 2475 FLQ 2477


>ref|XP_003521781.1| PREDICTED: translational activator GCN1 [Glycine max]
          Length = 2616

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = -2

Query: 209  SICRLIISWSLGKFCQESLFNLVCDAISTSRNKELREKKGGPVLIPGFCLPKCLQPLLPI 30
            ++ R+IIS  + K    S   LV DA+STSR+KE R+KKGGP+LIPGFCLPK LQP+LPI
Sbjct: 2163 ALSRVIIS--VPKEVLPSYIKLVRDAVSTSRDKERRKKKGGPILIPGFCLPKALQPILPI 2220

Query: 29   FLQ 21
            FLQ
Sbjct: 2221 FLQ 2223


>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = -2

Query: 182  SLGKFCQESLFNLVCDAISTSRNKELREKKGGPVLIPGFCLPKCLQPLLPIFLQ 21
            S+ K    S   +V DA+STSR+KE R+KKGGPVLIPGFCLPK LQPLLP+FLQ
Sbjct: 2015 SVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQ 2068


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = -2

Query: 182  SLGKFCQESLFNLVCDAISTSRNKELREKKGGPVLIPGFCLPKCLQPLLPIFLQ 21
            S+ K    S   +V DA+STSR+KE R+KKGGPVLIPGFCLPK LQPLLP+FLQ
Sbjct: 2167 SVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQ 2220


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