BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016163
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloropla...   409   e-112
ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putativ...   403   e-110
ref|XP_002318194.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
gb|AFJ66170.1| hypothetical protein 11M19.14 [Arabidopsis halleri]    385   e-104
ref|XP_002864094.1| hypothetical protein ARALYDRAFT_495173 [Arab...   384   e-104

>ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloroplastic-like [Vitis
            vinifera] gi|147770910|emb|CAN67541.1| hypothetical
            protein VITISV_012383 [Vitis vinifera]
            gi|302142786|emb|CBI20081.3| unnamed protein product
            [Vitis vinifera]
          Length = 946

 Score =  409 bits (1050), Expect = e-112
 Identities = 221/318 (69%), Positives = 249/318 (78%), Gaps = 5/318 (1%)
 Frame = -1

Query: 940  TFRLPRKPRKISALFERFTERAIKAVIYSQRETKELGKQMVFTQHLLLGLILEDRDSSGF 761
            +F   +   +ISA+FERFTERAIKAVI+SQRE K LG+ MVFTQHLLLGL+ EDR   GF
Sbjct: 64   SFVFRKSSPRISAVFERFTERAIKAVIFSQREAKALGRNMVFTQHLLLGLVAEDRSLDGF 123

Query: 760  LGSGITIERAREVVREXXXXXXXXXXXXXXXXXXXXXI-----PFSISTKRVFDAAHEYS 596
            LGSGITI+ AR+ VR                            PFSISTKRVF+AA EYS
Sbjct: 124  LGSGITIDDARDAVRSIWHDYNDSSIISGIPSSQTSVASSTDVPFSISTKRVFEAAIEYS 183

Query: 595  RSMGYNFIAPEHIAIGLFTVDDGSAARVLKRLGANLNQLASVAVSRLQGELAKDGRQPFS 416
            R+MGYNFIAPEHIAIGLFTVDDGSA RVLKRLGAN+N LA+VAVSRLQGELAKDG +P +
Sbjct: 184  RTMGYNFIAPEHIAIGLFTVDDGSAGRVLKRLGANVNHLAAVAVSRLQGELAKDGSEPSA 243

Query: 415  SPREALKNVTSGKAAIVSSSEKTKEKTALSQFCVDLTARANEGLIDPVIGRENEVQRIVQ 236
            + +       SGKAAIV SS K KEK+AL+QFCVDLTARA +GLIDPVIGR+ EVQR+VQ
Sbjct: 244  TFKGMQGKSFSGKAAIVKSSGKKKEKSALAQFCVDLTARATDGLIDPVIGRDMEVQRVVQ 303

Query: 235  ILCRRTKNNPILLGEPGVGKTAIAEGLATRIADGDVPVFLLAKRIMSLDIGLLMAGARER 56
            ILCRRTKNNPILLGE GVGKTAIAEGLA  IA+ DVP FLL KRIMSLDIGLLMAG +ER
Sbjct: 304  ILCRRTKNNPILLGESGVGKTAIAEGLAISIAEADVPSFLLTKRIMSLDIGLLMAGTKER 363

Query: 55   GELESRITTLISEILREG 2
            GELE+R+TTLIS+IL+ G
Sbjct: 364  GELEARVTTLISDILKSG 381


>ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putative [Ricinus communis]
            gi|223550170|gb|EEF51657.1| ERD1 protein, chloroplast
            precursor, putative [Ricinus communis]
          Length = 946

 Score =  403 bits (1035), Expect = e-110
 Identities = 216/327 (66%), Positives = 257/327 (78%), Gaps = 11/327 (3%)
 Frame = -1

Query: 949  NTPTFRLPRKPRK-----ISALFERFTERAIKAVIYSQRETKELGKQMVFTQHLLLGLIL 785
            N+ +F+  +  RK     IS++FERFTERAIK VI+SQRE + LGK MVFTQHLLLGLI 
Sbjct: 58   NSLSFKCSKSRRKRRILPISSVFERFTERAIKVVIFSQREARALGKDMVFTQHLLLGLIG 117

Query: 784  EDRDSSGFLGSGITIERAREVVREXXXXXXXXXXXXXXXXXXXXXI------PFSISTKR 623
            EDRD  GFLGSGI I++ARE+V+                             PF+ISTKR
Sbjct: 118  EDRDPDGFLGSGIKIDKAREIVQNIWSSDGDGTNASGSSTGKSGGGGSATDVPFAISTKR 177

Query: 622  VFDAAHEYSRSMGYNFIAPEHIAIGLFTVDDGSAARVLKRLGANLNQLASVAVSRLQGEL 443
            VF+AA EYSR+MGYNFIAPEHIAIGL TVDDGSA+RVLKRLGANL+ LA+ AV+RLQGEL
Sbjct: 178  VFEAAVEYSRTMGYNFIAPEHIAIGLLTVDDGSASRVLKRLGANLDDLATAAVARLQGEL 237

Query: 442  AKDGRQPFSSPREALKNVTSGKAAIVSSSEKTKEKTALSQFCVDLTARANEGLIDPVIGR 263
            AK+GR+P    + A +     KA  +SSSE+T+E++AL+QFCVDLTARA+EGLIDPVIGR
Sbjct: 238  AKEGREPSVEAKGAREKSFLKKAGALSSSEQTREESALAQFCVDLTARASEGLIDPVIGR 297

Query: 262  ENEVQRIVQILCRRTKNNPILLGEPGVGKTAIAEGLATRIADGDVPVFLLAKRIMSLDIG 83
            E E++RIVQILCRRTKNNPILLGE GVGKTAIAEGLATRIA  DVP+FL+AKR+MSLD+G
Sbjct: 298  ETEIERIVQILCRRTKNNPILLGESGVGKTAIAEGLATRIAQTDVPLFLIAKRVMSLDMG 357

Query: 82   LLMAGARERGELESRITTLISEILREG 2
            LL+AGA+ERGELE+R+T LI EIL+EG
Sbjct: 358  LLIAGAKERGELEARVTALIKEILKEG 384


>ref|XP_002318194.1| predicted protein [Populus trichocarpa] gi|222858867|gb|EEE96414.1|
            predicted protein [Populus trichocarpa]
          Length = 948

 Score =  392 bits (1008), Expect = e-107
 Identities = 206/313 (65%), Positives = 248/313 (79%), Gaps = 5/313 (1%)
 Frame = -1

Query: 925  RKPRKISALFERFTERAIKAVIYSQRETKELGKQMVFTQHLLLGLILEDRDSSGFLGSGI 746
            R+  ++SA+FERFTERAIKAV++SQRE + LGK MVFTQHLLLGLI+EDRD +GFLGSGI
Sbjct: 73   RRILQVSAVFERFTERAIKAVVFSQREARALGKDMVFTQHLLLGLIIEDRDPNGFLGSGI 132

Query: 745  TIERAREVV-----REXXXXXXXXXXXXXXXXXXXXXIPFSISTKRVFDAAHEYSRSMGY 581
             I++AREVV     RE                     +PFS STKRVF+AA EYSR+MG+
Sbjct: 133  KIDKAREVVKSIWQRESDSAEASELVSKGERGVSHSDVPFSASTKRVFEAAIEYSRTMGH 192

Query: 580  NFIAPEHIAIGLFTVDDGSAARVLKRLGANLNQLASVAVSRLQGELAKDGRQPFSSPREA 401
            NFIAPEHIAIGLFTVDDGSA RVL RLG + + LA++A+++LQGEL KDGR+P    +  
Sbjct: 193  NFIAPEHIAIGLFTVDDGSAGRVLNRLGVDGDALAAIAITKLQGELVKDGREPSVESKGK 252

Query: 400  LKNVTSGKAAIVSSSEKTKEKTALSQFCVDLTARANEGLIDPVIGRENEVQRIVQILCRR 221
                 S +AA + S EKTKEK+AL+QFCVDLTARA+EG IDPVIGR +E++RIVQILCRR
Sbjct: 253  HGKSVSKRAAALRSYEKTKEKSALAQFCVDLTARASEGRIDPVIGRHSEIERIVQILCRR 312

Query: 220  TKNNPILLGEPGVGKTAIAEGLATRIADGDVPVFLLAKRIMSLDIGLLMAGARERGELES 41
            TKNNPILLGE GVGKTAIAEGLA +IA  D+PVFLL KR+MSLD+GLL+AGA+ERGELE+
Sbjct: 313  TKNNPILLGESGVGKTAIAEGLAIKIAQADIPVFLLEKRVMSLDVGLLIAGAKERGELEA 372

Query: 40   RITTLISEILREG 2
            R+T+LI EI +EG
Sbjct: 373  RVTSLIREIQKEG 385


>gb|AFJ66170.1| hypothetical protein 11M19.14 [Arabidopsis halleri]
          Length = 946

 Score =  385 bits (989), Expect = e-104
 Identities = 208/326 (63%), Positives = 247/326 (75%), Gaps = 9/326 (2%)
 Frame = -1

Query: 952  TNTPTF--RLPRKPRK----ISALFERFTERAIKAVIYSQRETKELGKQMVFTQHLLLGL 791
            ++TPT   R P++ RK    ISA+FERFTERAI+A+I+SQ+E K LGK MV+TQHLLLGL
Sbjct: 56   SSTPTNFRRFPQRKRKKFTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGL 115

Query: 790  ILEDRDSSGFLGSGITIERAREVVR---EXXXXXXXXXXXXXXXXXXXXXIPFSISTKRV 620
            I EDRD  GFLGSGITI++ARE V    +                     +PFSISTKRV
Sbjct: 116  IAEDRDPQGFLGSGITIDKAREAVWSIWDEANSDSKQEEVSSTSYSKSTDMPFSISTKRV 175

Query: 619  FDAAHEYSRSMGYNFIAPEHIAIGLFTVDDGSAARVLKRLGANLNQLASVAVSRLQGELA 440
            F+AA EYSR+M   +IAPEHIA+GLFTVDDGSA RVLKRLGAN+N L + A++RL+GE+A
Sbjct: 176  FEAAVEYSRTMDCQYIAPEHIAVGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIA 235

Query: 439  KDGRQPFSSPREALKNVTSGKAAIVSSSEKTKEKTALSQFCVDLTARANEGLIDPVIGRE 260
            KDGR+P SS + + +   SG+     +  K K KT L QFCVDLTARA+EGLIDPVIGRE
Sbjct: 236  KDGREPSSSSKGSYEAPPSGRIVGSGTGGKAKAKTVLEQFCVDLTARASEGLIDPVIGRE 295

Query: 259  NEVQRIVQILCRRTKNNPILLGEPGVGKTAIAEGLATRIADGDVPVFLLAKRIMSLDIGL 80
             EVQR++QILCRRTKNNPILLGE GVGKTAIAEGLA  IA+   P FLL KRIMSLDIGL
Sbjct: 296  KEVQRVIQILCRRTKNNPILLGEAGVGKTAIAEGLAISIAEAKAPGFLLTKRIMSLDIGL 355

Query: 79   LMAGARERGELESRITTLISEILREG 2
            LMAGA+ERGELE+R+T LISE+ + G
Sbjct: 356  LMAGAKERGELEARVTALISEVKKSG 381


>ref|XP_002864094.1| hypothetical protein ARALYDRAFT_495173 [Arabidopsis lyrata subsp.
            lyrata] gi|297309929|gb|EFH40353.1| hypothetical protein
            ARALYDRAFT_495173 [Arabidopsis lyrata subsp. lyrata]
          Length = 946

 Score =  384 bits (987), Expect = e-104
 Identities = 206/324 (63%), Positives = 245/324 (75%), Gaps = 7/324 (2%)
 Frame = -1

Query: 952  TNTPTFRLPRKPRK----ISALFERFTERAIKAVIYSQRETKELGKQMVFTQHLLLGLIL 785
            T T   R P++ RK    ISA+FERFTERAI+A+I+SQ+E K LGK MV+TQHLLLGLI 
Sbjct: 58   TPTKFRRFPQRKRKKFTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIA 117

Query: 784  EDRDSSGFLGSGITIERAREVVR---EXXXXXXXXXXXXXXXXXXXXXIPFSISTKRVFD 614
            EDRD  GFLGSGITI++ARE V    +                     +PFSISTKRVF+
Sbjct: 118  EDRDPQGFLGSGITIDKAREAVWSIWDEANSDSKQEEVSSTSYSKSTDMPFSISTKRVFE 177

Query: 613  AAHEYSRSMGYNFIAPEHIAIGLFTVDDGSAARVLKRLGANLNQLASVAVSRLQGELAKD 434
            AA EYSR+M   +IAPEHIA+GLFTVDDGSA RVLKRLGAN+N L + A++RL+GE+AKD
Sbjct: 178  AAVEYSRTMDCQYIAPEHIAVGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKD 237

Query: 433  GRQPFSSPREALKNVTSGKAAIVSSSEKTKEKTALSQFCVDLTARANEGLIDPVIGRENE 254
            GR+P SS + + +   +G+ A   +  K K K  L QFCVDLTARA+EGLIDPVIGRE E
Sbjct: 238  GREPSSSSKGSFQAPPAGRIAGSGTGGKAKAKNVLEQFCVDLTARASEGLIDPVIGREKE 297

Query: 253  VQRIVQILCRRTKNNPILLGEPGVGKTAIAEGLATRIADGDVPVFLLAKRIMSLDIGLLM 74
            VQR++QILCRRTKNNPILLGE GVGKTAIAEGLA  IA+ + P FLL KRIMSLDIGLLM
Sbjct: 298  VQRVIQILCRRTKNNPILLGEAGVGKTAIAEGLAISIAEANAPGFLLTKRIMSLDIGLLM 357

Query: 73   AGARERGELESRITTLISEILREG 2
            AGA+ERGELE+R+T LISE+ + G
Sbjct: 358  AGAKERGELEARVTALISEVKKSG 381