BLASTX nr result

ID: Coptis23_contig00016141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016141
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284593.2| PREDICTED: kinesin-like protein KIF2A-like [...    89   3e-16
ref|XP_002303287.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002298217.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002516057.1| kif4, putative [Ricinus communis] gi|2235449...    79   5e-13
ref|XP_003633123.1| PREDICTED: kinesin-like protein KIF2C-like i...    70   2e-10

>ref|XP_002284593.2| PREDICTED: kinesin-like protein KIF2A-like [Vitis vinifera]
           gi|297743274|emb|CBI36141.3| unnamed protein product
           [Vitis vinifera]
          Length = 717

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/57 (78%), Positives = 48/57 (84%)
 Frame = -1

Query: 375 TSHYHSVRGRSFDDSEPYTASNKQISRARGLPGNTLMKSFANDKEKSGSVAKIKVVV 205
           TS YHSVRGRSFDDSEPY  +NKQ  RARGLP N L+KSFA DKEK+ SVAKIKVVV
Sbjct: 148 TSMYHSVRGRSFDDSEPYIPANKQGGRARGLPENNLLKSFAADKEKASSVAKIKVVV 204


>ref|XP_002303287.1| predicted protein [Populus trichocarpa] gi|222840719|gb|EEE78266.1|
           predicted protein [Populus trichocarpa]
          Length = 689

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = -1

Query: 378 GTSHYHSVRGRSFDDSEPYTASNKQISRARGLPGNTLMKSFANDKEKSGSVAKIKVVV 205
           G+S +H VRGRSFDDS+PY +SNKQ  RA GLP N L+KSFA DKEK+ SVAKIKVVV
Sbjct: 118 GSSLFHPVRGRSFDDSDPYISSNKQTGRAPGLPDNILLKSFAVDKEKTSSVAKIKVVV 175


>ref|XP_002298217.1| predicted protein [Populus trichocarpa] gi|222845475|gb|EEE83022.1|
           predicted protein [Populus trichocarpa]
          Length = 721

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = -1

Query: 378 GTSHYHSVRGRSFDDSEPYTASNKQISRARGLPGNTLMKSFANDKEKSGSVAKIKVVV 205
           G+S +H VRGRSFDDS PY ++NKQ  RA GLP N L+KSF  DKEK+ SVAKIKVVV
Sbjct: 118 GSSLFHPVRGRSFDDSYPYISNNKQTGRAPGLPDNNLLKSFVADKEKTSSVAKIKVVV 175


>ref|XP_002516057.1| kif4, putative [Ricinus communis] gi|223544962|gb|EEF46477.1| kif4,
           putative [Ricinus communis]
          Length = 712

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -1

Query: 375 TSHYHSVRGRSFDDSEPYTASNKQISRARGLPGNTLMKSFANDKEKSGSVAKIKVVV 205
           +S +H VRGRSFDD+EPY ++NKQ  RA  LP N L+KSFA +KEK+ SVAKIKVVV
Sbjct: 142 SSLFHPVRGRSFDDAEPYISNNKQTGRAPALPDNNLLKSFAAEKEKASSVAKIKVVV 198


>ref|XP_003633123.1| PREDICTED: kinesin-like protein KIF2C-like isoform 2 [Vitis
           vinifera]
          Length = 694

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = -1

Query: 378 GTSHYHSVRGRSFDDSEPYTASNKQISRARGLPGNTLMKSFANDKEKSGSVAKIKVVV 205
           G S    V G+SFDDSEPY  +NK  ++ARGL  N L+KSF+ DKEK+ +VAKIKVVV
Sbjct: 119 GPSFRQHVYGKSFDDSEPYLTNNKLANKARGLSDNNLLKSFSVDKEKASNVAKIKVVV 176


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