BLASTX nr result

ID: Coptis23_contig00016128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016128
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24668.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-l...   112   3e-23
ref|XP_004157611.1| PREDICTED: uncharacterized protein LOC101228...    87   1e-15
ref|XP_004140678.1| PREDICTED: uncharacterized protein LOC101211...    87   1e-15
ref|XP_002880057.1| Sas10/U3 ribonucleoprotein family protein [A...    79   4e-13

>emb|CBI24668.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  112 bits (280), Expect = 3e-23
 Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
 Frame = +1

Query: 31  KKVVWSGKKDSYYGAENINYEIGPSDXXXXXXXXXXVLRVQKEKAKSYSLXXXXXXXXXX 210
           KK VW  +K  YY A+N++YE+  SD          V+R+Q+EKAK  S+          
Sbjct: 170 KKTVWGRRKSDYYSADNVDYELQSSDEELPAEEEAEVMRLQREKAKFLSMEDFGIEDANQ 229

Query: 211 XXXXXXXXXXXXGILPKTRSKSKRLKEKGAEDDTGIAYE-VKKDLNALSREEQMDVVYSS 387
                        +  KT SKS  L ++ A+DDTG AYE VKKDLNALS+EEQMDVVYSS
Sbjct: 230 DESDGEPTMEEIMVKGKTTSKS--LADEEAKDDTGTAYEEVKKDLNALSKEEQMDVVYSS 287

Query: 388 APELVGLLSELN 423
           APELVGLLSELN
Sbjct: 288 APELVGLLSELN 299


>ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-like [Vitis vinifera]
          Length = 669

 Score =  112 bits (280), Expect = 3e-23
 Identities = 66/132 (50%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
 Frame = +1

Query: 31  KKVVWSGKKDSYYGAENINYEIGPSDXXXXXXXXXXVLRVQKEKAKSYSLXXXXXXXXXX 210
           KK VW  +K  YY A+N++YE+  SD          V+R+Q+EKAK  S+          
Sbjct: 120 KKTVWGRRKSDYYSADNVDYELQSSDEELPAEEEAEVMRLQREKAKFLSMEDFGIEDANQ 179

Query: 211 XXXXXXXXXXXXGILPKTRSKSKRLKEKGAEDDTGIAYE-VKKDLNALSREEQMDVVYSS 387
                        +  KT SKS  L ++ A+DDTG AYE VKKDLNALS+EEQMDVVYSS
Sbjct: 180 DESDGEPTMEEIMVKGKTTSKS--LADEEAKDDTGTAYEEVKKDLNALSKEEQMDVVYSS 237

Query: 388 APELVGLLSELN 423
           APELVGLLSELN
Sbjct: 238 APELVGLLSELN 249


>ref|XP_004157611.1| PREDICTED: uncharacterized protein LOC101228470 [Cucumis sativus]
          Length = 631

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
 Frame = +1

Query: 31  KKVVWSGKKDSYYGAENINYEIGPSDXXXXXXXXXXVLRVQKEKAKSYSLXXXXXXXXXX 210
           +K +W G++  YY A+N ++EI  SD          V+R+QKEKAK+ SL          
Sbjct: 89  QKTIWGGREGKYYDADNRDFEIQSSDDESLAEEEEEVIRLQKEKAKTLSLEDFGLEDESD 148

Query: 211 XXXXXXXXXXXXGILPKTRSKSKRLKEKGAEDDTGIAY-EVKKDLNALSREEQMDVVYSS 387
                       G+  KT ++      K A DD    Y E+ KD+NAL+REEQMDV+ SS
Sbjct: 149 EELTLEEMNGK-GVDAKTSAR------KEASDDMDATYQEIAKDVNALTREEQMDVLSSS 201

Query: 388 APELVGLLSELN 423
           APEL+GLL+ELN
Sbjct: 202 APELIGLLTELN 213


>ref|XP_004140678.1| PREDICTED: uncharacterized protein LOC101211748 [Cucumis sativus]
          Length = 620

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 54/132 (40%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
 Frame = +1

Query: 31  KKVVWSGKKDSYYGAENINYEIGPSDXXXXXXXXXXVLRVQKEKAKSYSLXXXXXXXXXX 210
           +K +W G++  YY A+N ++EI  SD          V+R+QKEKAK+ SL          
Sbjct: 78  QKTIWGGREGKYYDADNRDFEIQSSDDESLAEEEEEVIRLQKEKAKTLSLEDFGLEDESD 137

Query: 211 XXXXXXXXXXXXGILPKTRSKSKRLKEKGAEDDTGIAY-EVKKDLNALSREEQMDVVYSS 387
                       G+  KT ++      K A DD    Y E+ KD+NAL+REEQMDV+ SS
Sbjct: 138 EELTLEEMNGK-GVDAKTSAR------KEASDDMDATYQEIAKDVNALTREEQMDVLSSS 190

Query: 388 APELVGLLSELN 423
           APEL+GLL+ELN
Sbjct: 191 APELIGLLTELN 202


>ref|XP_002880057.1| Sas10/U3 ribonucleoprotein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325896|gb|EFH56316.1| Sas10/U3
           ribonucleoprotein family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/131 (34%), Positives = 70/131 (53%)
 Frame = +1

Query: 31  KKVVWSGKKDSYYGAENINYEIGPSDXXXXXXXXXXVLRVQKEKAKSYSLXXXXXXXXXX 210
           K+  W G+   Y+  +N+++++  SD          V+R+++E+  S +           
Sbjct: 120 KRSTWGGRSGLYHSGDNVDFDLQSSDDEDLKAEEEEVIRLRREQLGSITAADAGLDDDSE 179

Query: 211 XXXXXXXXXXXXGILPKTRSKSKRLKEKGAEDDTGIAYEVKKDLNALSREEQMDVVYSSA 390
                           K  +KS   K++  + DT +  E+KKD+N+LS+EEQMDVVYSSA
Sbjct: 180 EESDRELTMEEISKKGKQATKSITDKKEKDDKDTHVE-EIKKDINSLSKEEQMDVVYSSA 238

Query: 391 PELVGLLSELN 423
           PE+VGLLSELN
Sbjct: 239 PEIVGLLSELN 249


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