BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016126
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR13294.1| putative 40S ribosomal protein S8 [Prunus dulcis]       57   9e-10
sp|O81361.1|RS8_PRUAR RecName: Full=40S ribosomal protein S8 gi|...    57   1e-09
gb|ABA46755.1| unknown [Solanum tuberosum]                             57   3e-09
gb|ACF06617.1| 40S ribosomal protein S8 [Elaeis guineensis]            57   3e-09
ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vi...    57   3e-09

>gb|ABR13294.1| putative 40S ribosomal protein S8 [Prunus dulcis]
          Length = 140

 Score = 57.0 bits (136), Expect(2) = 9e-10
 Identities = 29/47 (61%), Positives = 31/47 (65%)
 Frame = -3

Query: 260 LMSTYYKIHKKCMGKS*DLMRKRRATSGKKKAWRKKQKYELGCQPVN 120
           L S    +    MG S D M KRRAT GKKKAWRKK+KYELG QP N
Sbjct: 16  LNSPKLSLQSGTMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPAN 62



 Score = 30.8 bits (68), Expect(2) = 9e-10
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -2

Query: 48  LRLDTGNFSLGGEAVT 1
           LRLDTGNFS G EAVT
Sbjct: 86  LRLDTGNFSWGSEAVT 101


>sp|O81361.1|RS8_PRUAR RecName: Full=40S ribosomal protein S8 gi|3264759|gb|AAC24583.1|
           40S ribosomal protein S8 [Prunus armeniaca]
          Length = 221

 Score = 56.6 bits (135), Expect(2) = 1e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -3

Query: 224 MGKS*DLMRKRRATSGKKKAWRKKQKYELGCQPVN 120
           MG S D M KRRAT GKKKAWRKK+KYELG QP N
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPAN 35



 Score = 30.8 bits (68), Expect(2) = 1e-09
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -2

Query: 48  LRLDTGNFSLGGEAVT 1
           LRLDTGNFS G EAVT
Sbjct: 59  LRLDTGNFSWGSEAVT 74


>gb|ABA46755.1| unknown [Solanum tuberosum]
          Length = 224

 Score = 56.6 bits (135), Expect(2) = 3e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -3

Query: 224 MGKS*DLMRKRRATSGKKKAWRKKQKYELGCQPVN 120
           MG S D M KRRAT GKKKAWRKK+KYELG QP N
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPAN 35



 Score = 29.6 bits (65), Expect(2) = 3e-09
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -2

Query: 48  LRLDTGNFSLGGEAVT 1
           LRLDTGN+S G EAVT
Sbjct: 59  LRLDTGNYSWGSEAVT 74


>gb|ACF06617.1| 40S ribosomal protein S8 [Elaeis guineensis]
          Length = 224

 Score = 56.6 bits (135), Expect(2) = 3e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -3

Query: 224 MGKS*DLMRKRRATSGKKKAWRKKQKYELGCQPVN 120
           MG S D M KRRAT GKKKAWRKK+KYELG QP N
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPAN 35



 Score = 29.6 bits (65), Expect(2) = 3e-09
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -2

Query: 48  LRLDTGNFSLGGEAVT 1
           LRLDTGN+S G EAVT
Sbjct: 59  LRLDTGNYSWGSEAVT 74


>ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
           gi|147772691|emb|CAN64937.1| hypothetical protein
           VITISV_011515 [Vitis vinifera]
          Length = 221

 Score = 56.6 bits (135), Expect(2) = 3e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -3

Query: 224 MGKS*DLMRKRRATSGKKKAWRKKQKYELGCQPVN 120
           MG S D M KRRAT GKKKAWRKK+KYELG QP N
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPAN 35



 Score = 29.6 bits (65), Expect(2) = 3e-09
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -2

Query: 48  LRLDTGNFSLGGEAVT 1
           LRLDTGN+S G EAVT
Sbjct: 59  LRLDTGNYSWGSEAVT 74