BLASTX nr result

ID: Coptis23_contig00016121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016121
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277707.1| PREDICTED: uncharacterized protein LOC100267...    58   1e-06

>ref|XP_002277707.1| PREDICTED: uncharacterized protein LOC100267212 [Vitis vinifera]
           gi|297743658|emb|CBI36541.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/96 (41%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
 Frame = +2

Query: 41  REVALRNPAPVLDLXXXXXXXXXXXXXXXXXXXXXPMRIEKNAV---KFSISRGGKPPLP 211
           +E ALRNP PV DL                      + +E   V   K S+ RGG     
Sbjct: 155 KEAALRNPVPVFDLNKISREEEEVQ-----------VNVESAGVEEQKKSVIRGGNDD-- 201

Query: 212 PRTKDMKLTVCRDIQKGSNRTGKKKISLQDPVALRV 319
            +  DMKL+VCR+I  G NR GK+KIS QD VALRV
Sbjct: 202 -QHSDMKLSVCRNIGNGPNRAGKRKISWQDQVALRV 236


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