BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016111
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...    94   9e-18
emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]    94   9e-18
ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase,...    88   8e-16
pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix O...    86   4e-15

>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis
           vinifera] gi|296090240|emb|CBI40059.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = +3

Query: 6   GAIRSKLFGQKEKKGKMEPYSGKKNAQSGPFSFHGGMQSLANMLGKELG-DGLKLNSKVL 182
           GA+ SKL  ++EK+G+ +  S KK  Q G FSF GGMQ+L + L KELG D L+L SKVL
Sbjct: 210 GAVLSKLSAKREKRGETKGSSEKKKRQRGSFSFQGGMQTLTDTLCKELGKDKLRLKSKVL 269

Query: 183 SLSCSLDENSLFDNWSISYATNHKKPSPDQSFDA 284
           SLS S  E S  +NWS++YA+N  K S D SFDA
Sbjct: 270 SLSYSHGEKSALENWSVAYASNPGKQSKDLSFDA 303


>emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]
          Length = 809

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = +3

Query: 6   GAIRSKLFGQKEKKGKMEPYSGKKNAQSGPFSFHGGMQSLANMLGKELG-DGLKLNSKVL 182
           GA+ SKL  ++EK+G+ +  S KK  Q G FSF GGMQ+L + L KELG D L+L SKVL
Sbjct: 222 GAVLSKLSAKREKRGETKGSSEKKKRQRGSFSFQGGMQTLTDTLCKELGKDKLRLKSKVL 281

Query: 183 SLSCSLDENSLFDNWSISYATNHKKPSPDQSFDA 284
           SLS S  E S  +NWS++YA+N  K S D SFDA
Sbjct: 282 SLSYSHGEKSALENWSVAYASNPGKQSKDLSFDA 315


>ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = +3

Query: 6   GAIRSKLFGQKEKKGKMEPYSGKKNAQSGPFSFHGGMQSLANMLGKELG-DGLKLNSKVL 182
           GA+++KL  +KEK G+ +  S KK  Q G FSF GGMQ+L + L  ELG DG+KL SKVL
Sbjct: 210 GAVKAKLSAKKEKNGEKKGSSEKKKRQHGSFSFLGGMQTLTDTLCTELGKDGVKLESKVL 269

Query: 183 SLSCSLDENSLFDNWSISYATNHKKPSPDQSFDA 284
           SLS S D  S F+NWS+SYA+   K +   S+DA
Sbjct: 270 SLSYSYDGKSTFENWSVSYASKGGKHAQASSYDA 303


>sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase, mitochondrial; AltName:
           Full=PX-2; AltName: Full=Protoporphyrinogen IX oxidase
           isozyme II; Short=PPO II; Short=PPX II
           gi|2370335|emb|CAA73866.1| protoporphyrinogen oxidase
           [Nicotiana tabacum] gi|3929920|dbj|BAA34712.1|
           mitochondrial protoporphyrinogen oxidase [Nicotiana
           tabacum] gi|4105188|gb|AAD02291.1| protoporphyrinogen
           oxidase PX-2 [Nicotiana tabacum]
          Length = 504

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   VGAIRSKLFGQKEKKGKMEPYSGKKNAQSGPFSFHGGMQSLANMLGKELG-DGLKLNSKV 179
           +GAIRSKL  + EKK      S  K  Q G FSF GGMQ+L + + K+L  D L+LNS+V
Sbjct: 205 LGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRV 264

Query: 180 LSLSCSLDENSLFDNWSISYATNHKKPSPDQSFDA 284
           L LSCS  E+S  D+WSI  A+ HK+ S ++SFDA
Sbjct: 265 LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDA 299


>pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix Oxidase
           gi|48425679|pdb|1SEZ|B Chain B, Crystal Structure Of
           Protoporphyrinogen Ix Oxidase
          Length = 504

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   VGAIRSKLFGQKEKKGKMEPYSGKKNAQSGPFSFHGGMQSLANMLGKELG-DGLKLNSKV 179
           +GAIRSKL  + EKK      S  K  Q G FSF GG Q+L + + K+L  D L+LNS+V
Sbjct: 205 LGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGXQTLTDAICKDLREDELRLNSRV 264

Query: 180 LSLSCSLDENSLFDNWSISYATNHKKPSPDQSFDA 284
           L LSCS  E+S  D+WSI  A+ HK+ S ++SFDA
Sbjct: 265 LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDA 299