BLASTX nr result

ID: Coptis23_contig00016098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016098
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...    88   8e-16
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...    80   2e-13
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]      72   4e-11

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   GRLNYDQSIEHFSHEHPLELSNIQQPSPNLSSCAGCNLKPSEWFYTCKACNYILHIQCSQ 182
           G+LN+D  I HFSH HPLELSN Q  S  ++SC+ CNL+PS W Y+CK CN+ LHI C+Q
Sbjct: 2   GKLNHDPYINHFSHPHPLELSNAQ--SLYMNSCSACNLQPSGWMYSCKPCNFTLHISCTQ 59

Query: 183 IPQHIHHPADP 215
           +P  I HP  P
Sbjct: 60  MPTLITHPCHP 70


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = +3

Query: 3   GRLNYDQSIEHFSHEHPLELSNIQQPSPNLSSCAGCNLKPSEWFYTCKACNYILHIQCSQ 182
           GRL++D  I HFSH HPL LSN+Q   P ++ C+ C L+ S W Y+C  CN+ LH+ CSQ
Sbjct: 2   GRLSHDPCIHHFSHPHPLHLSNLQSSYP-ITHCSACQLESSGWMYSCNPCNFTLHLSCSQ 60

Query: 183 IPQHIHHPADP 215
           +P  I HP+ P
Sbjct: 61  LPSLITHPSHP 71


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 18  DQSIEHFSHEHPLELSNIQ-QPSPNLSSCAGCNLKPSEWFYTCKACNYILHIQCSQIPQH 194
           + +I+HFSH HPL+LSN Q Q +  L+SC+GC LK S W Y C  CNY LH+ CSQ+PQ 
Sbjct: 9   EAAIQHFSHPHPLQLSNYQPQQTLCLASCSGCKLKISGWIYACTQCNYFLHVSCSQMPQQ 68

Query: 195 IHHP 206
           I HP
Sbjct: 69  ITHP 72


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
 Frame = +3

Query: 3   GRLNYDQS--IEHFSHEHPLELSNIQ-QPSPNLSSCAGCNLKPSEWFYTCKACNYILHIQ 173
           GR+N      I HFSH HPL+LSN   Q +  L+SC+GC LK S   Y CK CNY LHI 
Sbjct: 2   GRMNQQPETVIHHFSHSHPLQLSNHHPQQTLTLASCSGCKLKASGLIYDCKRCNYFLHIS 61

Query: 174 CSQIPQHIHH 203
           CSQ+PQ I H
Sbjct: 62  CSQMPQQITH 71


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +3

Query: 24  SIEHFSHEHPLEL-SNIQQPSPNLSSCAGCNLKPSEWFYTCKACNYILHIQCSQIPQHIH 200
           +I HFSH HPLEL +N    S +   C+GC ++     YTCK+CN+ LH +CSQ+PQ I 
Sbjct: 14  TINHFSHPHPLELITNQNFASSSSQLCSGCKIQAIGSIYTCKSCNFFLHTECSQMPQQIT 73

Query: 201 HPAD 212
           HP D
Sbjct: 74  HPFD 77


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