BLASTX nr result

ID: Coptis23_contig00016070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016070
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24666.3| unnamed protein product [Vitis vinifera]              166   1e-38
ref|XP_002275949.1| PREDICTED: uncharacterized protein LOC100247...   166   1e-38
ref|XP_002530571.1| conserved hypothetical protein [Ricinus comm...   162   8e-38
ref|XP_004140680.1| PREDICTED: uncharacterized protein LOC101212...   153   6e-35
gb|AFK44722.1| unknown [Medicago truncatula]                          146   6e-33

>emb|CBI24666.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  166 bits (419), Expect = 1e-38
 Identities = 93/175 (53%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
 Frame = +3

Query: 75  HGRGLTGLSQPIYAVNNPDLDTSATDMKDIGVTLRKAKVVVESRNDDTIQVRVDLTGKDT 254
           H   L  LS+PI AV +     S  D KD  +T++ AK+VVES+ DD IQ+RVD+ G DT
Sbjct: 264 HQGSLRFLSKPISAVGSGS-KASIIDPKDNDITIKNAKIVVESQEDDEIQLRVDVAGVDT 322

Query: 255 QKVFNDVLTNLARTAPAVPGFRRQKGGXXXXXXXXXXVPKDFLVRAIGEARVIKFVIQEI 434
           Q+VF+ VLTNLAR+AP +PGFRRQKGG          VPK FL++ +GE RV KFVIQEI
Sbjct: 323 QRVFDHVLTNLARSAPPIPGFRRQKGG------NSLYVPKSFLLQILGEERVTKFVIQEI 376

Query: 435 VSMTMTEYVEEEKLNV-SKEFKTIQTPEELEQLFEAGNAFGFNATLTIEKVETEA 596
           ++ T+++YV +E LNV  K+  T    EEL+ LF  GN F FNATL +EK E+EA
Sbjct: 377 ITATVSDYVMKENLNVKDKKITTTPAAEELKSLFTPGNEFRFNATLELEKSESEA 431


>ref|XP_002275949.1| PREDICTED: uncharacterized protein LOC100247585 [Vitis vinifera]
          Length = 232

 Score =  166 bits (419), Expect = 1e-38
 Identities = 93/175 (53%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
 Frame = +3

Query: 75  HGRGLTGLSQPIYAVNNPDLDTSATDMKDIGVTLRKAKVVVESRNDDTIQVRVDLTGKDT 254
           H   L  LS+PI AV +     S  D KD  +T++ AK+VVES+ DD IQ+RVD+ G DT
Sbjct: 56  HQGSLRFLSKPISAVGSGS-KASIIDPKDNDITIKNAKIVVESQEDDEIQLRVDVAGVDT 114

Query: 255 QKVFNDVLTNLARTAPAVPGFRRQKGGXXXXXXXXXXVPKDFLVRAIGEARVIKFVIQEI 434
           Q+VF+ VLTNLAR+AP +PGFRRQKGG          VPK FL++ +GE RV KFVIQEI
Sbjct: 115 QRVFDHVLTNLARSAPPIPGFRRQKGG------KTSNVPKSFLLQILGEERVTKFVIQEI 168

Query: 435 VSMTMTEYVEEEKLNV-SKEFKTIQTPEELEQLFEAGNAFGFNATLTIEKVETEA 596
           ++ T+++YV +E LNV  K+  T    EEL+ LF  GN F FNATL +EK E+EA
Sbjct: 169 ITATVSDYVMKENLNVKDKKITTTPAAEELKSLFTPGNEFRFNATLELEKSESEA 223


>ref|XP_002530571.1| conserved hypothetical protein [Ricinus communis]
           gi|223529870|gb|EEF31801.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  162 bits (411), Expect = 8e-38
 Identities = 96/199 (48%), Positives = 133/199 (66%), Gaps = 2/199 (1%)
 Frame = +3

Query: 3   TFRRSLCSHTFSANQR-PFNGLSFTHGRGLTGLSQPIYAVNNPDLDTSATDMKDIGVTLR 179
           T R +  + T S   R PF+       R L  + +PI AV +  L+T+ TD KD  +TL+
Sbjct: 22  TLRNNNITTTTSFKLRLPFSSNYKGKKRVLEHVFKPISAVGS-GLETTFTDPKDNAITLK 80

Query: 180 KAKVVVESRNDDTIQVRVDLTGKDTQKVFNDVLTNLARTAPAVPGFRRQKGGXXXXXXXX 359
            AKVVVES  ++ IQ+RVDL+G +T+ VF+ VL NLARTAP +PGFRR+KGG        
Sbjct: 81  NAKVVVESMQENKIQLRVDLSGDETEIVFSKVLANLARTAPPIPGFRREKGG------DF 134

Query: 360 XXVPKDFLVRAIGEARVIKFVIQEIVSMTMTEYVEEEKLNVSK-EFKTIQTPEELEQLFE 536
             VP+DFL++ +GE RV KFVIQEIVS ++ +YV++E LNV + +  T+Q  +EL++LF 
Sbjct: 135 RLVPRDFLLQILGEERVTKFVIQEIVSSSVADYVKKENLNVKENKVNTVQEADELKKLFI 194

Query: 537 AGNAFGFNATLTIEKVETE 593
            GN FGFNA L +E+ +TE
Sbjct: 195 PGNDFGFNAVLELEETKTE 213


>ref|XP_004140680.1| PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus]
          Length = 247

 Score =  153 bits (386), Expect = 6e-35
 Identities = 84/169 (49%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
 Frame = +3

Query: 75  HGRGLTGLSQPIYAVNNPDLDTSATDMKDIGVTLRKAKVVVESRNDDTIQVRVDLTGKDT 254
           H  G   LS+P  ++ +  L+ + TD K   +TL+ AKVVVES  ++ IQ+RVDLTG +T
Sbjct: 79  HKIGSRFLSKPT-SIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDET 137

Query: 255 QKVFNDVLTNLARTAPAVPGFRRQKGGXXXXXXXXXXVPKDFLVRAIGEARVIKFVIQEI 434
           QKVF+ VLTNLAR+AP +PGFR+QKGG          VPK FL+  +G+ RV KF+IQEI
Sbjct: 138 QKVFDQVLTNLARSAPPMPGFRKQKGG------KTSNVPKSFLLEVLGKDRVTKFIIQEI 191

Query: 435 VSMTMTEYVEEEKLNV-SKEFKTIQTPEELEQLFEAGNAFGFNATLTIE 578
           ++ TM +Y ++E +NV  K+  T QT +EL+ LF  G  FGFNA L +E
Sbjct: 192 LNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELE 240


>gb|AFK44722.1| unknown [Medicago truncatula]
          Length = 221

 Score =  146 bits (369), Expect = 6e-33
 Identities = 85/176 (48%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
 Frame = +3

Query: 45  QRPFNGLSFTHGRGLTGLSQPIYAVNNPDLDTSATDMKDIGVTLRKAKVVVESRNDDTIQ 224
           +R  + LS ++G  L  L+ PI AVN+  L+ S TD  DI   L  A VV E  +D+ IQ
Sbjct: 42  RRSLDILSTSNGTTLRHLNTPISAVNS-GLEASITDSNDISAFLTDATVVAEPGDDNRIQ 100

Query: 225 VRVDLTGKDTQKVFNDVLTNLARTAPAVPGFRRQKGGXXXXXXXXXXVPKDFLVRAIGEA 404
           +RVDLTG  TQKVF+ +  NL RTAP VPGFR QKGG          +PKDFL++ +GE 
Sbjct: 101 LRVDLTGVQTQKVFDRIPINLGRTAPPVPGFRMQKGG------KSSKIPKDFLLQMLGEE 154

Query: 405 RVIKFVIQEIVSMTMTEYVEEEKLNV-SKEFKTIQTPEELEQLFEAGNAFGFNATL 569
           RV KF IQEI++ TM +Y ++E L+   K+  TIQT +EL++ F AG  FGFN  +
Sbjct: 155 RVTKFAIQEILNCTMADYTKKENLDAKDKKVSTIQTIQELKKSFTAGKEFGFNVLI 210


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