BLASTX nr result

ID: Coptis23_contig00016063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016063
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96519.2| hypothetical protein LOC_Os12g06230 [Oryza sativa...   105   3e-21
ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group] g...   104   7e-21
dbj|BAD81603.1| helicase-like protein [Oryza sativa Japonica Group]   104   7e-21
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S...   103   1e-20
ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group] g...   103   1e-20

>gb|ABA96519.2| hypothetical protein LOC_Os12g06230 [Oryza sativa Japonica Group]
          Length = 2279

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
 Frame = +1

Query: 1    IAATILPGGRTAHSRFKLPLSPKPNSMCLISKGTDLAKLIKKASVMIWDEITMTHWYTFQ 180
            +A+ +LP GRTAHSRFK+P+    NS+C I +GT LA+LI+K S++IWDE  MTH   F+
Sbjct: 1190 VASLLLPRGRTAHSRFKIPIDITENSICTIKRGTMLAELIQKTSLIIWDEAPMTHRRCFE 1249

Query: 181  ALHKTFRDLMDEE------LPFGGKVMVIGGDF 261
            AL +T RDL+ E       +PFGGKV+V+GGDF
Sbjct: 1250 ALDRTLRDLLSEHTPSNSIVPFGGKVVVLGGDF 1282


>ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group]
            gi|113532101|dbj|BAF04484.1| Os01g0244200 [Oryza sativa
            Japonica Group]
          Length = 2498

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 6/93 (6%)
 Frame = +1

Query: 1    IAATILPGGRTAHSRFKLPLSPKPNSMCLISKGTDLAKLIKKASVMIWDEITMTHWYTFQ 180
            +A+ +LP GRTAHSRFK+P+    NS+C I +GT LA+LI+K S++IWDE  MTH   F+
Sbjct: 1213 VASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTHRRCFE 1272

Query: 181  ALHKTFRDLMDEE------LPFGGKVMVIGGDF 261
            AL +T RDL+ E       LPFGGK +V+GGDF
Sbjct: 1273 ALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDF 1305


>dbj|BAD81603.1| helicase-like protein [Oryza sativa Japonica Group]
          Length = 1652

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 6/93 (6%)
 Frame = +1

Query: 1    IAATILPGGRTAHSRFKLPLSPKPNSMCLISKGTDLAKLIKKASVMIWDEITMTHWYTFQ 180
            +A+ +LP GRTAHSRFK+P+    NS+C I +GT LA+LI+K S++IWDE  MTH   F+
Sbjct: 1213 VASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTHRRCFE 1272

Query: 181  ALHKTFRDLMDEE------LPFGGKVMVIGGDF 261
            AL +T RDL+ E       LPFGGK +V+GGDF
Sbjct: 1273 ALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDF 1305


>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
            gi|241946122|gb|EES19267.1| hypothetical protein
            SORBIDRAFT_09g008040 [Sorghum bicolor]
          Length = 1679

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/87 (55%), Positives = 66/87 (75%)
 Frame = +1

Query: 1    IAATILPGGRTAHSRFKLPLSPKPNSMCLISKGTDLAKLIKKASVMIWDEITMTHWYTFQ 180
            IAA+ILPGGRTAHSRFK+P+    N+MC  SK +  A+L+++AS++IWDE+ MT     +
Sbjct: 1276 IAASILPGGRTAHSRFKIPIKIGENTMCSFSKQSGTAELLRRASLIIWDEVAMTKRQCVE 1335

Query: 181  ALHKTFRDLMDEELPFGGKVMVIGGDF 261
             L ++ +D+M+  LPFGGKVMV GGDF
Sbjct: 1336 TLDRSLQDIMECGLPFGGKVMVFGGDF 1362


>ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
            gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa
            Japonica Group]
          Length = 1932

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 6/93 (6%)
 Frame = +1

Query: 1    IAATILPGGRTAHSRFKLPLSPKPNSMCLISKGTDLAKLIKKASVMIWDEITMTHWYTFQ 180
            +A+ +LP GRTAHSRFK+P+    N++C I +GT LA LI+K S++IWDE  MTH   F+
Sbjct: 991  VASLLLPRGRTAHSRFKIPIDIDENNICTIKRGTMLADLIQKTSLIIWDEAPMTHRRCFE 1050

Query: 181  ALHKTFRDLMDEE------LPFGGKVMVIGGDF 261
            AL +T RDL+ E       +PFGGKV+V+GGDF
Sbjct: 1051 ALDRTLRDLLSEHTPSNSIVPFGGKVVVLGGDF 1083


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