BLASTX nr result

ID: Coptis23_contig00016049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016049
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   458   e-126
ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi...   455   e-125
ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
ref|XP_004146325.1| PREDICTED: WD repeat-containing protein 75-l...   424   e-116

>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
            gi|296087114|emb|CBI33488.3| unnamed protein product
            [Vitis vinifera]
          Length = 815

 Score =  458 bits (1178), Expect = e-126
 Identities = 226/350 (64%), Positives = 277/350 (79%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1046 VIPNIIATPIESKGKPSDLFAFVSVKDTSKPDDGSKSLLGQIWKCNLSKSSLVGGV-LAE 870
            VIP I++   E+ GK  +LFA++SV++T   DD  K +  +I KCNL+KS L  GV LAE
Sbjct: 103  VIPGILSQLAETDGKTPNLFAYLSVENTKIQDDQPK-VHRKILKCNLTKSRLAAGVILAE 161

Query: 869  TRYPEFITISASGEYFGIRNKHKVHLWKILAKDSK-YDVKKMKLHHTKSFSVLAFHPKER 693
            T+ PE ITIS+SG++FG+RNK K+H+W+++A D +   +KK+ LHHTK+ +V AFHP ER
Sbjct: 162  TQQPELITISSSGKFFGVRNKRKLHVWEVIAHDHEGAPIKKITLHHTKNLTVFAFHPTER 221

Query: 692  ILAAGDVTGRILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVSEGDDADSCTTWHWHPS 513
            I+AAGDVTGRILIWR FG R FS       GR + NE+ERPGV   DDADSC TWHWH +
Sbjct: 222  IVAAGDVTGRILIWRSFGRRTFSMGDGLMNGRAMNNEDERPGVRGDDDADSCATWHWHSA 281

Query: 512  EVKSLSFSSDGAYLYSGGKEGVLVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCA 333
            EVK LSFSSDGAYL+SGGKEGVLV WQL+TGKKKFLPRIG+PLLYF  S DPSLSSVSC+
Sbjct: 282  EVKVLSFSSDGAYLFSGGKEGVLVFWQLDTGKKKFLPRIGSPLLYFATSLDPSLSSVSCS 341

Query: 332  NNRIHLLKMPSMEIIKSISGIELPCSFPEIYGGLRGGFVFDHSAGLVVVQTESYSIQFYS 153
            +NRIHLLKMPSMEI+KSISGI+LPCSFPEIY GL   F+FD +AGLV  +TE+Y IQFYS
Sbjct: 342  DNRIHLLKMPSMEILKSISGIKLPCSFPEIYEGLHSRFIFDQTAGLVAFRTENYCIQFYS 401

Query: 152  LFDNREISQIQVCERSHQADDEVTLVLALTAVSMDGSKLSTAEVKLPEEG 3
            LFD+RE  ++Q+CER+HQ  D+VT+V+ L  +S DGS +STAE K PEEG
Sbjct: 402  LFDDRENFEVQICERNHQPSDDVTVVVTLMVLSPDGSMMSTAETKFPEEG 451


>ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi|223526967|gb|EEF29164.1|
            wd40 protein, putative [Ricinus communis]
          Length = 807

 Score =  455 bits (1170), Expect = e-125
 Identities = 223/350 (63%), Positives = 283/350 (80%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1046 VIPNIIATPIESKGKPSDLFAFVSVKDTSKPDDGSKSLLGQIWKCNLSKSSLVGGV-LAE 870
            VIP++++   E+  K S LFA+VS+++T + +D SKSL G I KCNL+ S L+GGV L E
Sbjct: 100  VIPSLLSQQAETNEKRSKLFAYVSIENTKETEDQSKSLRGLIKKCNLTDSRLLGGVTLTE 159

Query: 869  TRYPEFITISASGEYFGIRNKHKVHLWKILAKDSKYD-VKKMKLHHTKSFSVLAFHPKER 693
            T+ P+FITIS SG+YFGI  K K+H+W + + DS+   VKK+ LHHT++ +V+AFHP ++
Sbjct: 160  TKQPQFITISPSGKYFGIWTKRKLHIWIVPSTDSERAIVKKITLHHTRNMTVVAFHPTQK 219

Query: 692  ILAAGDVTGRILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVSEGDDADSCTTWHWHPS 513
            I+AAGDVTGRILIWR FGNR F  + +   G  + N+EERPGV   DDA+SCTTWHWHPS
Sbjct: 220  IVAAGDVTGRILIWRGFGNRSFGVNDILMSGISMNNDEERPGVRGDDDAESCTTWHWHPS 279

Query: 512  EVKSLSFSSDGAYLYSGGKEGVLVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCA 333
            EV  LSFSSDGAYLYSGGKEGVLVVWQL+TGKKKFLPRIG+PLLY+T+S DPSLSS+SCA
Sbjct: 280  EVNVLSFSSDGAYLYSGGKEGVLVVWQLDTGKKKFLPRIGSPLLYYTDSTDPSLSSISCA 339

Query: 332  NNRIHLLKMPSMEIIKSISGIELPCSFPEIYGGLRGGFVFDHSAGLVVVQTESYSIQFYS 153
            +N+IH+LKMPSM I+KSISGI+LPCSFP++      G  FD ++GLV V+TE+Y IQ YS
Sbjct: 340  DNQIHILKMPSMGILKSISGIKLPCSFPKMSKVSFSGVAFDRTSGLVAVRTENYCIQLYS 399

Query: 152  LFDNREISQIQVCERSHQADDEVTLVLALTAVSMDGSKLSTAEVKLPEEG 3
            LFD+R IS++QVCER++Q  DE+TLV+AL A+S+DGS +STAEVKL EEG
Sbjct: 400  LFDDRGISEVQVCERNYQPSDEITLVVALVALSLDGSMMSTAEVKLAEEG 449


>ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1|
            predicted protein [Populus trichocarpa]
          Length = 812

 Score =  449 bits (1155), Expect = e-124
 Identities = 221/352 (62%), Positives = 285/352 (80%), Gaps = 4/352 (1%)
 Frame = -1

Query: 1046 VIPNIIATPIESKGKPSDLFAFVSVKDTSKPD-DGSKSLLGQIWKCNLSKSSLVGGV-LA 873
            VIP++++   E+  K    FA++SV++T +P+ +  K+L GQI KCNL+ S + GG+ L+
Sbjct: 103  VIPSLLSQTAETNDKSPKTFAYLSVENTKEPEKESGKALRGQIKKCNLTNSRMAGGMTLS 162

Query: 872  ETRYPEFITISASGEYFGIRNKHKVHLWKI-LAKDSKYDVKKMKLHHTKSFSVLAFHPKE 696
            ET+ PE IT+S+SG+YFGI+ K K+ +WK+  A+  +  VKK+ LHHTK+ +VLAFHP +
Sbjct: 163  ETKQPEIITVSSSGKYFGIQFKRKLRIWKVPTAESERAVVKKITLHHTKNMNVLAFHPTQ 222

Query: 695  RILAAGDVTGRILIWRDFGNREFS-GSGVTKKGRVLKNEEERPGVSEGDDADSCTTWHWH 519
            RI+AAGDVTGRILIWR FG+R F+ G G+  + ++  NEEERPGV   DDADSCTTWHWH
Sbjct: 223  RIVAAGDVTGRILIWRGFGDRTFADGDGLVSR-KLTNNEEERPGVRGDDDADSCTTWHWH 281

Query: 518  PSEVKSLSFSSDGAYLYSGGKEGVLVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVS 339
             +EV  L FSSDGAYLYSGGKEGVLVVWQL+TG+KKFLPRIG+PLL+FT+S DPSLSS+S
Sbjct: 282  SAEVNVLFFSSDGAYLYSGGKEGVLVVWQLDTGRKKFLPRIGSPLLWFTDSPDPSLSSIS 341

Query: 338  CANNRIHLLKMPSMEIIKSISGIELPCSFPEIYGGLRGGFVFDHSAGLVVVQTESYSIQF 159
            CA+N+IHLLKMPSMEI+KSISGI+LPCSFPE+  GL+ G  FD +AGLV ++TE+Y IQ 
Sbjct: 342  CADNQIHLLKMPSMEILKSISGIKLPCSFPEMCNGLQSGIAFDCNAGLVALRTENYCIQL 401

Query: 158  YSLFDNREISQIQVCERSHQADDEVTLVLALTAVSMDGSKLSTAEVKLPEEG 3
            YSLFD+R IS++ VCER+HQ  DEVT+V+ L  +S+DGS +STAEVKLPEEG
Sbjct: 402  YSLFDDRGISEVVVCERNHQPGDEVTVVVTLAVLSLDGSMMSTAEVKLPEEG 453


>ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1|
            predicted protein [Populus trichocarpa]
          Length = 811

 Score =  443 bits (1140), Expect = e-122
 Identities = 223/351 (63%), Positives = 273/351 (77%), Gaps = 3/351 (0%)
 Frame = -1

Query: 1046 VIPNIIATPIESKGKPSDLFAFVSVKDTSKPD-DGSKSLLGQIWKCNLSKSSLVGGV-LA 873
            VIP+++    E+  K    FA++SV++T + + + +K L GQI KCNL+   + GGV L 
Sbjct: 103  VIPSLLCQTTENNEKSLKSFAYLSVENTKEAEKESTKVLRGQIKKCNLTDFRMAGGVTLT 162

Query: 872  ETRYPEFITISASGEYFGIRNKHKVHLWKILAKDSKYDV-KKMKLHHTKSFSVLAFHPKE 696
            ET+ PE IT+SASG+YFGIR K K+ +WK+   +S+  V KK+ LHHTK+ +VLAFHP +
Sbjct: 163  ETKQPEIITVSASGKYFGIRFKCKLQIWKVPTTESERAVVKKITLHHTKNMTVLAFHPNQ 222

Query: 695  RILAAGDVTGRILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVSEGDDADSCTTWHWHP 516
            RI+AAGDVTGRILIWR FG+R F         R + N EERPGV   DDADSCTTWHWH 
Sbjct: 223  RIIAAGDVTGRILIWRGFGDRTFVDDDRLVGVRSMNNGEERPGVRGDDDADSCTTWHWHS 282

Query: 515  SEVKSLSFSSDGAYLYSGGKEGVLVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSC 336
            +EV  L FS DGAYLYSGGKEGVLVVWQL+TGKKKFLPRIG+PLL+FT S DPSLSSVSC
Sbjct: 283  AEVNVLFFSLDGAYLYSGGKEGVLVVWQLDTGKKKFLPRIGSPLLWFTNSPDPSLSSVSC 342

Query: 335  ANNRIHLLKMPSMEIIKSISGIELPCSFPEIYGGLRGGFVFDHSAGLVVVQTESYSIQFY 156
            A+N+IHLLKMPSMEI+KSISGI+LPCSFPE+Y GLR G  FD +AGLV + TE+Y IQ Y
Sbjct: 343  ADNQIHLLKMPSMEILKSISGIKLPCSFPEMYNGLRSGIAFDRNAGLVALPTENYCIQLY 402

Query: 155  SLFDNREISQIQVCERSHQADDEVTLVLALTAVSMDGSKLSTAEVKLPEEG 3
            SL D+R IS++QVCER+HQ  DEVT+V+ L  +S+DGS +STAEVKLPEEG
Sbjct: 403  SLLDDRGISEVQVCERNHQPGDEVTVVVTLAVLSLDGSMMSTAEVKLPEEG 453


>ref|XP_004146325.1| PREDICTED: WD repeat-containing protein 75-like [Cucumis sativus]
          Length = 810

 Score =  424 bits (1091), Expect = e-116
 Identities = 207/350 (59%), Positives = 270/350 (77%), Gaps = 2/350 (0%)
 Frame = -1

Query: 1046 VIPNIIATPIESKGKPSDLFAFVSVKDTSKPDDGSKSLLGQIWKCNLSKSSLVGGV-LAE 870
            VIP+++   +E   K  DLFA+VSV++    D     + GQI KCNL+KS L  GV LAE
Sbjct: 103  VIPSLLGQLLERDVKSRDLFAYVSVQNIGVKDGKPVPVRGQILKCNLTKSRLATGVILAE 162

Query: 869  TRYPEFITISASGEYFGIRNKHKVHLWKIL-AKDSKYDVKKMKLHHTKSFSVLAFHPKER 693
            T+ PE++T S+SG +FGIRNK K+H+WK+   +  K   KK+ LHHTK  +VLAFHP +R
Sbjct: 163  TQQPEYLTTSSSGSFFGIRNKRKIHVWKVPNGQFEKLGAKKITLHHTKDLTVLAFHPTQR 222

Query: 692  ILAAGDVTGRILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVSEGDDADSCTTWHWHPS 513
             +AAGDVTGRILIWR FGNR F  SG     +   ++E+RPGV   DDADSC+T HWHP+
Sbjct: 223  TVAAGDVTGRILIWRGFGNRTFPVSGEEAGKKSFDSDEDRPGVRGNDDADSCSTRHWHPT 282

Query: 512  EVKSLSFSSDGAYLYSGGKEGVLVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCA 333
            EV +LSFSSDGAYLYSGGKEGVLVVWQL+T K+K+LPRIG+PLLYFT+S DP L+SVSCA
Sbjct: 283  EVIALSFSSDGAYLYSGGKEGVLVVWQLDTEKRKYLPRIGSPLLYFTDSPDPLLASVSCA 342

Query: 332  NNRIHLLKMPSMEIIKSISGIELPCSFPEIYGGLRGGFVFDHSAGLVVVQTESYSIQFYS 153
            +N+IHLLKMPSMEI+KSISGI+LPCSFP++  G   GF F+ + GLV +++E+YSIQFYS
Sbjct: 343  DNQIHLLKMPSMEILKSISGIKLPCSFPDVCQGSNNGFAFNQNDGLVALRSENYSIQFYS 402

Query: 152  LFDNREISQIQVCERSHQADDEVTLVLALTAVSMDGSKLSTAEVKLPEEG 3
            LFD+  I ++Q+CER+HQ  +E+T+V+    +S+DGS ++TAE+++PE G
Sbjct: 403  LFDDCGICEVQICERNHQPGEELTVVITSVVLSLDGSLMTTAEIRIPEGG 452


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