BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016047
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    61   1e-07
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    61   1e-07
ref|XP_002448142.1| hypothetical protein SORBIDRAFT_06g022020 [S...    59   5e-07
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    58   7e-07

>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
 Frame = -1

Query: 398 PELYQNRCVGSTGNWLITVNKELELHIFNPFSRTALRLPSQSTLPYQFSNVDGDYSQE-- 225
           PE Y+ RC GS+  WLI V     + + NP +R  + LP+ ST     ++V  + S+   
Sbjct: 83  PEAYEKRCCGSSHGWLIMVEDSPSIFLLNPLTRERIELPALSTFSIFPTDVVFENSRNLN 142

Query: 224 ---------YLRDQFLAKVVLSSTLKFSDNLLEDLDSVVAIVIYAALKKLAIARLGDESW 72
                    ++RD F+ K +LSS      N +       A+VIY   + LA  R GD +W
Sbjct: 143 ENFIMREKFHIRDTFIVKAILSSDPSLDTNFM-------AVVIYGVNENLAFCRSGDAAW 195

Query: 71  SPVEPRIPATSAIDDVIF 18
           + ++          D +F
Sbjct: 196 TVIDETTSPPRRYKDALF 213


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 17/145 (11%)
 Frame = -1

Query: 398 PEL-YQNRCVGSTGNWLITVNKELELHIFNPFSRTALRLPSQSTLP----YQFSNVDGDY 234
           PE+ Y+ R  GS+  WL+ ++    + + NP +R  L LP  S+ P    + +S++  +Y
Sbjct: 84  PEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGREY 143

Query: 233 ------------SQEYLRDQFLAKVVLSSTLKFSDNLLEDLDSVVAIVIYAALKKLAIAR 90
                       S   +RD F+ KVVLSS+    DN      + V I I      LA  R
Sbjct: 144 ALRNLLGERVTVSLRQMRDSFIRKVVLSSS-PLKDN------NFVVIAILNQTDDLAYCR 196

Query: 89  LGDESWSPVEPRIPATSAIDDVIFL 15
            GD+SWS VE    A S  +DVIF+
Sbjct: 197 NGDKSWSLVE---NARSFCEDVIFV 218


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/127 (27%), Positives = 61/127 (48%)
 Frame = -1

Query: 398  PELYQNRCVGSTGNWLITVNKELELHIFNPFSRTALRLPSQSTLPYQFSNVDGDYSQEYL 219
            PE+    C GS   WL+T+  +L++ + NP +R  + LPS    P   + +D        
Sbjct: 999  PEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRS 1058

Query: 218  RDQFLAKVVLSSTLKFSDNLLEDLDSVVAIVIYAALKKLAIARLGDESWSPVEPRIPATS 39
            +D F+ K VLSS     D           ++IY+   +LA  + G ++W+ +E     + 
Sbjct: 1059 KDIFIYKAVLSSAPSSPD--------CAVMIIYSDYGRLAFTKPGHQTWTLLESE---SG 1107

Query: 38   AIDDVIF 18
             +DD+I+
Sbjct: 1108 PVDDIIY 1114


>ref|XP_002448142.1| hypothetical protein SORBIDRAFT_06g022020 [Sorghum bicolor]
           gi|241939325|gb|EES12470.1| hypothetical protein
           SORBIDRAFT_06g022020 [Sorghum bicolor]
          Length = 404

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
 Frame = -1

Query: 398 PELYQNRCVGSTGNWLITVNKELELHIFNPFSRTALRLPSQSTL--------------PY 261
           P +++   +GS+  WLIT ++  E+H+ NP +   + LPS  T+               Y
Sbjct: 73  PPIHRRYLIGSSNGWLITADERSEMHLVNPITSEQVSLPSVITIEQVTPIFDDNGAICKY 132

Query: 260 QFSNVDGD--------YSQEYLRDQFLAKVVLSSTLKFSDNLLEDLDSVVAIVIYAALKK 105
           Q+S    D        YS   LRD    K +L  T            S + ++I++ L +
Sbjct: 133 QYSRHTADSVVGPPSTYSLSTLRDHLFHKALLFFT--------TSAGSYIVVLIHSPLGQ 184

Query: 104 LAIARLGDESWSPVEPRIPATSAIDDVIF 18
           L+ AR GDE W+     +P  S  +D I+
Sbjct: 185 LSFARSGDEKWT----WLPPHSNFEDCIY 209


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 16/140 (11%)
 Frame = -1

Query: 389 YQNRCVGSTGNWLITVNKELELHIFNPFSRTALRLPSQSTLP----YQFSNVDGDY---- 234
           ++ R  GS+  WL+ +++  E+ + NP +R+ + LP  ST P    + F++V  +Y    
Sbjct: 85  HRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGREYALRT 144

Query: 233 --------SQEYLRDQFLAKVVLSSTLKFSDNLLEDLDSVVAIVIYAALKKLAIARLGDE 78
                   S + +RD F+ K +LSS+     +        +A+VI      LA+ R  D+
Sbjct: 145 SSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF-------IAVVILNQTGDLALCRKSDD 197

Query: 77  SWSPVEPRIPATSAIDDVIF 18
           SW+ +E    A S  +DVIF
Sbjct: 198 SWTFLE---DAQSYAEDVIF 214