BLASTX nr result

ID: Coptis23_contig00016027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016027
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285598.2| PREDICTED: protein odr-4 homolog [Vitis vini...   146   3e-33
ref|XP_003603703.1| Odr-4-like protein [Medicago truncatula] gi|...   139   5e-31
emb|CBI19310.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_003526527.1| PREDICTED: protein odr-4 homolog [Glycine max]    137   2e-30
ref|XP_003522742.1| PREDICTED: protein odr-4 homolog [Glycine max]    136   3e-30

>ref|XP_002285598.2| PREDICTED: protein odr-4 homolog [Vitis vinifera]
          Length = 492

 Score =  146 bits (368), Expect = 3e-33
 Identities = 77/134 (57%), Positives = 87/134 (64%), Gaps = 4/134 (2%)
 Frame = +3

Query: 3   KGDIIMSLQSRLDIICDXXXXXXXXXXXXXXX----ISTERSVSQFALHLLKKPTSLSFP 170
           KGDIIMSLQSRLDIICD                   IST + VSQ  LHLL+K   LSFP
Sbjct: 310 KGDIIMSLQSRLDIICDEADGDVGPTDDGCKEANDEISTGKPVSQLVLHLLRKQQCLSFP 369

Query: 171 RRVLVPWIGGVYICDYLQSLETFEVVKDHCKELMCFEAPTDPSVILEPEKEGTSLMMKSF 350
           RRV VPW+ G YICDYLQ  +T EV+KDHC ELM  EAPTDPS  LEPE E  +L  KSF
Sbjct: 370 RRVFVPWLAGTYICDYLQPYDTVEVLKDHCVELMSMEAPTDPSTFLEPEIEAPTLATKSF 429

Query: 351 WEVVIPGNAASGSD 392
            +V +P N+A  S+
Sbjct: 430 LDVAVPFNSAFSSE 443


>ref|XP_003603703.1| Odr-4-like protein [Medicago truncatula]
           gi|355492751|gb|AES73954.1| Odr-4-like protein [Medicago
           truncatula]
          Length = 486

 Score =  139 bits (349), Expect = 5e-31
 Identities = 75/151 (49%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
 Frame = +3

Query: 3   KGDIIMSLQSRLDIICDXXXXXXXXXXXXXXXI-----STERSVSQFALHLLKKPTSLSF 167
           KGDII SLQSRLDIICD               +     S E+ VSQ  LHLL+K  SL F
Sbjct: 305 KGDIITSLQSRLDIICDETDVDSGNHHDVGKQVNEDDVSVEKPVSQLVLHLLRKECSLPF 364

Query: 168 PRRVLVPWIGGVYICDYLQSLETFEVVKDHCKELMCFEAPTDPSVILEPEKEGTSLMMKS 347
           PRRV  PW+ G Y CDYLQ  ET EV+KDHC EL+  +APTD S ILEPEKE  S   KS
Sbjct: 365 PRRVFAPWLAGTYACDYLQPSETVEVLKDHCMELLSMKAPTDISTILEPEKEVISFRTKS 424

Query: 348 FWEVVIPGNAASGSDGNLMLKSEKESIQKEG 440
           FW+V +P      S   + L+ +K  +   G
Sbjct: 425 FWDVAVP------SYSEIHLREDKMKLDGRG 449


>emb|CBI19310.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  137 bits (346), Expect = 1e-30
 Identities = 73/123 (59%), Positives = 80/123 (65%), Gaps = 4/123 (3%)
 Frame = +3

Query: 3   KGDIIMSLQSRLDIICDXXXXXXXXXXXXXXX----ISTERSVSQFALHLLKKPTSLSFP 170
           KGDIIMSLQSRLDIICD                   IST + VSQ  LHLL+K   LSFP
Sbjct: 310 KGDIIMSLQSRLDIICDEADGDVGPTDDGCKEANDEISTGKPVSQLVLHLLRKQQCLSFP 369

Query: 171 RRVLVPWIGGVYICDYLQSLETFEVVKDHCKELMCFEAPTDPSVILEPEKEGTSLMMKSF 350
           RRV VPW+ G YICDYLQ  +T EV+KDHC ELM  EAPTDPS  LEPE E  +L  KSF
Sbjct: 370 RRVFVPWLAGTYICDYLQPYDTVEVLKDHCVELMSMEAPTDPSTFLEPEIEAPTLATKSF 429

Query: 351 WEV 359
            +V
Sbjct: 430 LDV 432


>ref|XP_003526527.1| PREDICTED: protein odr-4 homolog [Glycine max]
          Length = 488

 Score =  137 bits (344), Expect = 2e-30
 Identities = 71/126 (56%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
 Frame = +3

Query: 3   KGDIIMSLQSRLDIICDXXXXXXXXXXXXXXXISTERS----VSQFALHLLKKPTSLSFP 170
           KGDII SLQSRLDIICD               +S E S    V Q  LHLL+K  SL FP
Sbjct: 308 KGDIITSLQSRLDIICDEVDADSGNNHDVGSQVSDELSAETPVPQLVLHLLRKGCSLPFP 367

Query: 171 RRVLVPWIGGVYICDYLQSLETFEVVKDHCKELMCFEAPTDPSVILEPEKEGTSLMMKSF 350
           RRV  PW+  VY+CDYLQ  ET EV+KDHC EL+  +APTD S ILEPEKE  S   KSF
Sbjct: 368 RRVFAPWLAVVYVCDYLQPFETVEVLKDHCMELLSMKAPTDVSKILEPEKEELSFKTKSF 427

Query: 351 WEVVIP 368
           W+V +P
Sbjct: 428 WDVAVP 433


>ref|XP_003522742.1| PREDICTED: protein odr-4 homolog [Glycine max]
          Length = 484

 Score =  136 bits (343), Expect = 3e-30
 Identities = 71/126 (56%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
 Frame = +3

Query: 3   KGDIIMSLQSRLDIICDXXXXXXXXXXXXXXX----ISTERSVSQFALHLLKKPTSLSFP 170
           KGDII SLQSRLDIICD                   IS E+ V Q  LHLL+K  SL FP
Sbjct: 304 KGDIITSLQSRLDIICDEVDVDSGNNHDVGSQVSNEISAEKPVPQLVLHLLRKGCSLPFP 363

Query: 171 RRVLVPWIGGVYICDYLQSLETFEVVKDHCKELMCFEAPTDPSVILEPEKEGTSLMMKSF 350
           RRV  PW+ GVY+CDYLQ  ET EV+KDH  EL+  +AP D S ILEPEKE  S   KSF
Sbjct: 364 RRVFAPWLAGVYVCDYLQPSETVEVLKDHSMELLSMKAPADVSTILEPEKEEISFKTKSF 423

Query: 351 WEVVIP 368
           W+VV+P
Sbjct: 424 WDVVVP 429


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