BLASTX nr result

ID: Coptis23_contig00016001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00016001
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282636.1| PREDICTED: origin recognition complex subuni...   248   4e-64
ref|XP_004152733.1| PREDICTED: origin recognition complex subuni...   245   3e-63
ref|XP_003558649.1| PREDICTED: origin recognition complex subuni...   235   4e-60
ref|NP_001049192.1| Os03g0184700 [Oryza sativa Japonica Group] g...   233   2e-59
gb|AFW72565.1| hypothetical protein ZEAMMB73_553492 [Zea mays]        232   3e-59

>ref|XP_002282636.1| PREDICTED: origin recognition complex subunit 2-like [Vitis
           vinifera]
          Length = 362

 Score =  248 bits (634), Expect = 4e-64
 Identities = 115/136 (84%), Positives = 127/136 (93%)
 Frame = -3

Query: 553 KMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQSVFKV 374
           KMVHTQFNW WYHVPTF PYK EG+F+PLILA GGTAQ+AKTA IVLQSLTPNAQSVFKV
Sbjct: 225 KMVHTQFNWCWYHVPTFVPYKAEGIFYPLILAHGGTAQSAKTAAIVLQSLTPNAQSVFKV 284

Query: 373 LAEHQMTHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADGQDCL 194
           LAEHQ+ H DEEGMP N+LY+ICRERFLVSSQITLNSHLTEF+DH+L+KTRRH+DGQDCL
Sbjct: 285 LAEHQLAHPDEEGMPVNNLYSICRERFLVSSQITLNSHLTEFKDHELIKTRRHSDGQDCL 344

Query: 193 YIPLTSEALEKLLQEI 146
           YIPL +EALEKLLQ+I
Sbjct: 345 YIPLATEALEKLLQDI 360


>ref|XP_004152733.1| PREDICTED: origin recognition complex subunit 2-like [Cucumis
           sativus] gi|449496004|ref|XP_004160009.1| PREDICTED:
           origin recognition complex subunit 2-like [Cucumis
           sativus]
          Length = 360

 Score =  245 bits (626), Expect = 3e-63
 Identities = 116/136 (85%), Positives = 126/136 (92%)
 Frame = -3

Query: 553 KMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQSVFKV 374
           KMVHTQFNW WYHVPTFAPYK+EG+FFPLILA GGTAQ+AKTA IVLQSLTPNAQSVFKV
Sbjct: 224 KMVHTQFNWLWYHVPTFAPYKIEGMFFPLILAHGGTAQSAKTATIVLQSLTPNAQSVFKV 283

Query: 373 LAEHQMTHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADGQDCL 194
           L EHQ++H DEEGMP + LY ICRERFLVSSQITLNSHLTEF+DH+LVKTRRH+DGQDCL
Sbjct: 284 LIEHQLSHPDEEGMPIDKLYAICRERFLVSSQITLNSHLTEFKDHELVKTRRHSDGQDCL 343

Query: 193 YIPLTSEALEKLLQEI 146
           YIPL SEALEKLL E+
Sbjct: 344 YIPLPSEALEKLLTEL 359


>ref|XP_003558649.1| PREDICTED: origin recognition complex subunit 2-like [Brachypodium
           distachyon]
          Length = 374

 Score =  235 bits (599), Expect = 4e-60
 Identities = 110/136 (80%), Positives = 124/136 (91%)
 Frame = -3

Query: 553 KMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQSVFKV 374
           KMVHTQF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQSVF+V
Sbjct: 238 KMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQSVFRV 297

Query: 373 LAEHQMTHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADGQDCL 194
           LAE+Q+ +  EEGMP + LYT CRERFLVSSQ+TLNSHLTEF+DHDLVK R+H+DGQDCL
Sbjct: 298 LAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSDGQDCL 357

Query: 193 YIPLTSEALEKLLQEI 146
           +IPL S+ALEKLLQE+
Sbjct: 358 HIPLVSDALEKLLQEL 373


>ref|NP_001049192.1| Os03g0184700 [Oryza sativa Japonica Group]
           gi|108706555|gb|ABF94350.1| Origin recognition complex
           subunit 2, putative, expressed [Oryza sativa Japonica
           Group] gi|113547663|dbj|BAF11106.1| Os03g0184700 [Oryza
           sativa Japonica Group] gi|215769125|dbj|BAH01354.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218192219|gb|EEC74646.1| hypothetical protein
           OsI_10291 [Oryza sativa Indica Group]
           gi|222624324|gb|EEE58456.1| hypothetical protein
           OsJ_09689 [Oryza sativa Japonica Group]
          Length = 379

 Score =  233 bits (594), Expect = 2e-59
 Identities = 110/136 (80%), Positives = 123/136 (90%)
 Frame = -3

Query: 553 KMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQSVFKV 374
           KMVHTQF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQSVF+V
Sbjct: 243 KMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTMKTALVVLQSLTPNAQSVFRV 302

Query: 373 LAEHQMTHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADGQDCL 194
           LAE+Q+ H  EEGM  + LYT CRERFLVSSQ+TLNSHLTEF+DHDLVK R+H+DGQDCL
Sbjct: 303 LAEYQLAHEKEEGMHFSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSDGQDCL 362

Query: 193 YIPLTSEALEKLLQEI 146
           +IPL S+ALEKLLQE+
Sbjct: 363 HIPLVSDALEKLLQEL 378


>gb|AFW72565.1| hypothetical protein ZEAMMB73_553492 [Zea mays]
          Length = 514

 Score =  232 bits (592), Expect = 3e-59
 Identities = 109/136 (80%), Positives = 123/136 (90%)
 Frame = -3

Query: 553 KMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQSVFKV 374
           KMVH QF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQSVF+V
Sbjct: 378 KMVHKQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQSVFRV 437

Query: 373 LAEHQMTHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADGQDCL 194
           LAE+Q+ +  EEGMP + LYT CRERFLVSSQ+TLN+HLTEF+DHDLVKTR+H+DGQDCL
Sbjct: 438 LAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNAHLTEFKDHDLVKTRKHSDGQDCL 497

Query: 193 YIPLTSEALEKLLQEI 146
            IPL S+ALEKLLQE+
Sbjct: 498 RIPLVSDALEKLLQEL 513


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