BLASTX nr result
ID: Coptis23_contig00015990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015990 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac... 157 1e-36 ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac... 155 4e-36 emb|CBI40588.3| unnamed protein product [Vitis vinifera] 153 1e-35 ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac... 153 1e-35 ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac... 153 2e-35 >ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis sativus] gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis sativus] Length = 253 Score = 157 bits (396), Expect = 1e-36 Identities = 74/91 (81%), Positives = 83/91 (91%) Frame = -1 Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94 ERDAEDAIR LD+ PFG+ +RRLSVEWARGERG RHRDG++ M NQRPTKTLFVINFDPI Sbjct: 45 ERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG-RHRDGSKSMANQRPTKTLFVINFDPI 103 Query: 93 NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1 TR RDIE+HFEP+GK+L+VRIRRNFAFVQF Sbjct: 104 RTRVRDIERHFEPYGKVLNVRIRRNFAFVQF 134 >ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine max] Length = 264 Score = 155 bits (391), Expect = 4e-36 Identities = 75/91 (82%), Positives = 82/91 (90%) Frame = -1 Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94 ERDAE+AIRALD+ PFGH KRRLSVEWARGERG RHRDG++ NQ+PTKTLFVINFDPI Sbjct: 45 ERDAEEAIRALDNVPFGHEKRRLSVEWARGERG-RHRDGSK--ANQKPTKTLFVINFDPI 101 Query: 93 NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1 TR RDIEKHFEP+G +LHVRIRRNFAFVQF Sbjct: 102 RTRVRDIEKHFEPYGNVLHVRIRRNFAFVQF 132 >emb|CBI40588.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 153 bits (387), Expect = 1e-35 Identities = 71/91 (78%), Positives = 82/91 (90%) Frame = -1 Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94 E DA+DAIR LD+ PFG+ +RRLSVEWA+GERG RHR+G+R M NQRPTKTLFVINFDPI Sbjct: 28 EHDADDAIRGLDNIPFGYDRRRLSVEWAKGERG-RHREGSRSMANQRPTKTLFVINFDPI 86 Query: 93 NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1 TR RDIE+HFEP+GK+LHVRIRRNFAFVQ+ Sbjct: 87 RTRIRDIERHFEPYGKVLHVRIRRNFAFVQY 117 >ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis vinifera] Length = 241 Score = 153 bits (387), Expect = 1e-35 Identities = 71/91 (78%), Positives = 82/91 (90%) Frame = -1 Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94 E DA+DAIR LD+ PFG+ +RRLSVEWA+GERG RHR+G+R M NQRPTKTLFVINFDPI Sbjct: 45 EHDADDAIRGLDNIPFGYDRRRLSVEWAKGERG-RHREGSRSMANQRPTKTLFVINFDPI 103 Query: 93 NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1 TR RDIE+HFEP+GK+LHVRIRRNFAFVQ+ Sbjct: 104 RTRIRDIERHFEPYGKVLHVRIRRNFAFVQY 134 >ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine max] Length = 259 Score = 153 bits (386), Expect = 2e-35 Identities = 74/91 (81%), Positives = 81/91 (89%) Frame = -1 Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94 ERDAE+AIRALD+ PFGH KRRLSVEWARGERG RH DG++ NQ+PTKTLFVINFDPI Sbjct: 45 ERDAEEAIRALDNVPFGHEKRRLSVEWARGERG-RHHDGSK--ANQKPTKTLFVINFDPI 101 Query: 93 NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1 TR RDIEKHFEP+G +LHVRIRRNFAFVQF Sbjct: 102 RTRVRDIEKHFEPYGNVLHVRIRRNFAFVQF 132