BLASTX nr result

ID: Coptis23_contig00015990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015990
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac...   157   1e-36
ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...   155   4e-36
emb|CBI40588.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...   153   1e-35
ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac...   153   2e-35

>ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus] gi|449477961|ref|XP_004155176.1| PREDICTED:
           arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus]
          Length = 253

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/91 (81%), Positives = 83/91 (91%)
 Frame = -1

Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94
           ERDAEDAIR LD+ PFG+ +RRLSVEWARGERG RHRDG++ M NQRPTKTLFVINFDPI
Sbjct: 45  ERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG-RHRDGSKSMANQRPTKTLFVINFDPI 103

Query: 93  NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1
            TR RDIE+HFEP+GK+L+VRIRRNFAFVQF
Sbjct: 104 RTRVRDIERHFEPYGKVLNVRIRRNFAFVQF 134


>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 264

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/91 (82%), Positives = 82/91 (90%)
 Frame = -1

Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94
           ERDAE+AIRALD+ PFGH KRRLSVEWARGERG RHRDG++   NQ+PTKTLFVINFDPI
Sbjct: 45  ERDAEEAIRALDNVPFGHEKRRLSVEWARGERG-RHRDGSK--ANQKPTKTLFVINFDPI 101

Query: 93  NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1
            TR RDIEKHFEP+G +LHVRIRRNFAFVQF
Sbjct: 102 RTRVRDIEKHFEPYGNVLHVRIRRNFAFVQF 132


>emb|CBI40588.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/91 (78%), Positives = 82/91 (90%)
 Frame = -1

Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94
           E DA+DAIR LD+ PFG+ +RRLSVEWA+GERG RHR+G+R M NQRPTKTLFVINFDPI
Sbjct: 28  EHDADDAIRGLDNIPFGYDRRRLSVEWAKGERG-RHREGSRSMANQRPTKTLFVINFDPI 86

Query: 93  NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1
            TR RDIE+HFEP+GK+LHVRIRRNFAFVQ+
Sbjct: 87  RTRIRDIERHFEPYGKVLHVRIRRNFAFVQY 117


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/91 (78%), Positives = 82/91 (90%)
 Frame = -1

Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94
           E DA+DAIR LD+ PFG+ +RRLSVEWA+GERG RHR+G+R M NQRPTKTLFVINFDPI
Sbjct: 45  EHDADDAIRGLDNIPFGYDRRRLSVEWAKGERG-RHREGSRSMANQRPTKTLFVINFDPI 103

Query: 93  NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1
            TR RDIE+HFEP+GK+LHVRIRRNFAFVQ+
Sbjct: 104 RTRIRDIERHFEPYGKVLHVRIRRNFAFVQY 134


>ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 259

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/91 (81%), Positives = 81/91 (89%)
 Frame = -1

Query: 273 ERDAEDAIRALDDAPFGHSKRRLSVEWARGERGARHRDGARPMTNQRPTKTLFVINFDPI 94
           ERDAE+AIRALD+ PFGH KRRLSVEWARGERG RH DG++   NQ+PTKTLFVINFDPI
Sbjct: 45  ERDAEEAIRALDNVPFGHEKRRLSVEWARGERG-RHHDGSK--ANQKPTKTLFVINFDPI 101

Query: 93  NTRTRDIEKHFEPFGKILHVRIRRNFAFVQF 1
            TR RDIEKHFEP+G +LHVRIRRNFAFVQF
Sbjct: 102 RTRVRDIEKHFEPYGNVLHVRIRRNFAFVQF 132


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