BLASTX nr result

ID: Coptis23_contig00015989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015989
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164817.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...    82   6e-14
ref|XP_004136446.1| PREDICTED: uncharacterized protein LOC101211...    82   6e-14
ref|XP_002459793.1| hypothetical protein SORBIDRAFT_02g010755 [S...    80   2e-13
ref|NP_001183810.1| uncharacterized protein LOC100502403 [Zea ma...    79   5e-13
ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [S...    77   1e-12

>ref|XP_004164817.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Cucumis sativus]
          Length = 254

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/61 (59%), Positives = 47/61 (77%)
 Frame = -1

Query: 183 HLYF*PEFLHSMSPGELPPHELTLKLGSPIILFRNLDPKNGLCNDTRMLCRRFYQNIIYS 4
           H Y+  +FL+S+ P  +PPH+L LK   P+IL RNLDP NGLCN TRM+CR+F +NIIY+
Sbjct: 145 HNYYQEKFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPGNGLCNGTRMVCRKFRKNIIYA 204

Query: 3   E 1
           E
Sbjct: 205 E 205


>ref|XP_004136446.1| PREDICTED: uncharacterized protein LOC101211322 [Cucumis sativus]
          Length = 254

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/61 (59%), Positives = 47/61 (77%)
 Frame = -1

Query: 183 HLYF*PEFLHSMSPGELPPHELTLKLGSPIILFRNLDPKNGLCNDTRMLCRRFYQNIIYS 4
           H Y+  +FL+S+ P  +PPH+L LK   P+IL RNLDP NGLCN TRM+CR+F +NIIY+
Sbjct: 145 HNYYQEKFLNSLLPNGVPPHKLFLKKDCPVILLRNLDPGNGLCNGTRMVCRKFRKNIIYA 204

Query: 3   E 1
           E
Sbjct: 205 E 205


>ref|XP_002459793.1| hypothetical protein SORBIDRAFT_02g010755 [Sorghum bicolor]
           gi|241923170|gb|EER96314.1| hypothetical protein
           SORBIDRAFT_02g010755 [Sorghum bicolor]
          Length = 213

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = -1

Query: 183 HLYF*PEFLHSMSPGELPPHELTLKLGSPIILFRNLDPKNGLCNDTRMLCRRFYQNIIYS 4
           H Y+  EFL+S++P  LPPH L LK+G P+IL RN+DP NGLCNDTR+L R F +N I +
Sbjct: 97  HNYYPSEFLNSLTPNGLPPHVLKLKVGCPVILLRNIDPANGLCNDTRLLVRGFQRNTIDA 156

Query: 3   E 1
           E
Sbjct: 157 E 157


>ref|NP_001183810.1| uncharacterized protein LOC100502403 [Zea mays]
           gi|238014680|gb|ACR38375.1| unknown [Zea mays]
          Length = 136

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = -1

Query: 183 HLYF*PEFLHSMSPGELPPHELTLKLGSPIILFRNLDPKNGLCNDTRMLCRRFYQNIIYS 4
           H Y+ PEFL++++P  LPPH L LK+G P+IL RN+DP NGLCN TR++ R F +N I +
Sbjct: 28  HNYYPPEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPANGLCNGTRLIVRGFQRNSIDA 87

Query: 3   E 1
           E
Sbjct: 88  E 88


>ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [Sorghum bicolor]
            gi|241934813|gb|EES07958.1| hypothetical protein
            SORBIDRAFT_05g002670 [Sorghum bicolor]
          Length = 1193

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = -1

Query: 183  HLYF*PEFLHSMSPGELPPHELTLKLGSPIILFRNLDPKNGLCNDTRMLCRRFYQNII 10
            H Y+  EFL++++P  LPPH L LK+G P+IL RN+DP NGLCNDTR++ R F +N I
Sbjct: 1006 HNYYPEEFLNTLTPNGLPPHMLKLKIGCPVILLRNIDPANGLCNDTRLIIRGFQKNTI 1063


Top