BLASTX nr result

ID: Coptis23_contig00015981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015981
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222...   169   2e-40
ref|XP_003592143.1| RNA-binding protein with multiple splicing [...   169   2e-40
ref|XP_003592142.1| RNA-binding protein with multiple splicing [...   169   2e-40
ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815...   168   4e-40
gb|ACU19073.1| unknown [Glycine max]                                  168   4e-40

>ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
           sativus] gi|449462156|ref|XP_004148807.1| PREDICTED:
           uncharacterized protein LOC101222348 isoform 2 [Cucumis
           sativus]
          Length = 257

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/119 (68%), Positives = 96/119 (80%)
 Frame = +1

Query: 4   PNGRGVMGFNGQLPADAMXXXXXXXXXXXXDATNTLYIEGLPPDSTKREVAHIFRPFVGY 183
           PNGR  + +   LP D+M            DA+NTLY+EGLPPDS++REVAHIFRPFVGY
Sbjct: 126 PNGRN-LEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRPFVGY 184

Query: 184 KEVRLVTKESKHRGGDPLILCFVDFTNPACAATALSALQGYRMDEHNSDSHILRLQFAR 360
           KE+RLV+KESKHRGGDPLILCFVDF NPACAATA+SALQGY+MDE + +S+ LRLQF+R
Sbjct: 185 KELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDPESNYLRLQFSR 243


>ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355481191|gb|AES62394.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
           gi|388515921|gb|AFK46022.1| unknown [Medicago
           truncatula]
          Length = 147

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/118 (72%), Positives = 94/118 (79%)
 Frame = +1

Query: 7   NGRGVMGFNGQLPADAMXXXXXXXXXXXXDATNTLYIEGLPPDSTKREVAHIFRPFVGYK 186
           NGR V  F GQLP DA+            DA++TLY+EGLP DSTKREVAHIFRPFVGY+
Sbjct: 16  NGRDV-NFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFRPFVGYR 74

Query: 187 EVRLVTKESKHRGGDPLILCFVDFTNPACAATALSALQGYRMDEHNSDSHILRLQFAR 360
           EVRLV KESKHRGGDPLILCFVDF NPACAATALSALQGY++DE N +S  LRLQF+R
Sbjct: 75  EVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRLQFSR 132


>ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355481190|gb|AES62393.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 252

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/118 (72%), Positives = 94/118 (79%)
 Frame = +1

Query: 7   NGRGVMGFNGQLPADAMXXXXXXXXXXXXDATNTLYIEGLPPDSTKREVAHIFRPFVGYK 186
           NGR V  F GQLP DA+            DA++TLY+EGLP DSTKREVAHIFRPFVGY+
Sbjct: 121 NGRDV-NFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFRPFVGYR 179

Query: 187 EVRLVTKESKHRGGDPLILCFVDFTNPACAATALSALQGYRMDEHNSDSHILRLQFAR 360
           EVRLV KESKHRGGDPLILCFVDF NPACAATALSALQGY++DE N +S  LRLQF+R
Sbjct: 180 EVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRLQFSR 237


>ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
          Length = 251

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/119 (70%), Positives = 95/119 (79%)
 Frame = +1

Query: 7   NGRGVMGFNGQLPADAMXXXXXXXXXXXXDATNTLYIEGLPPDSTKREVAHIFRPFVGYK 186
           NGR V  + GQLP DA             DA++TLY+EGLP DST+REVAHIFRPFVGY+
Sbjct: 121 NGRNV-NYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYR 179

Query: 187 EVRLVTKESKHRGGDPLILCFVDFTNPACAATALSALQGYRMDEHNSDSHILRLQFARF 363
           EVRLV+KESKHRGGDPLILCFVDF NPACAATALSALQGY++DE N +S  LRLQF+RF
Sbjct: 180 EVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSRF 238


>gb|ACU19073.1| unknown [Glycine max]
          Length = 251

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/119 (70%), Positives = 95/119 (79%)
 Frame = +1

Query: 7   NGRGVMGFNGQLPADAMXXXXXXXXXXXXDATNTLYIEGLPPDSTKREVAHIFRPFVGYK 186
           NGR V  + GQLP DA             DA++TLY+EGLP DST+REVAHIFRPFVGY+
Sbjct: 121 NGRNV-NYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYR 179

Query: 187 EVRLVTKESKHRGGDPLILCFVDFTNPACAATALSALQGYRMDEHNSDSHILRLQFARF 363
           EVRLV+KESKHRGGDPLILCFVDF NPACAATALSALQGY++DE N +S  LRLQF+RF
Sbjct: 180 EVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSRF 238


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