BLASTX nr result

ID: Coptis23_contig00015980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015980
         (2108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD55677.1| putative transposase protein [Zea mays]                355   3e-95
ref|XP_003631805.1| PREDICTED: uncharacterized protein LOC100248...   347   6e-93
ref|XP_003635639.1| PREDICTED: uncharacterized protein LOC100855...   347   9e-93
ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241...   347   9e-93
emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera]   347   9e-93

>gb|AAD55677.1| putative transposase protein [Zea mays]
          Length = 793

 Score =  355 bits (910), Expect = 3e-95
 Identities = 178/367 (48%), Positives = 242/367 (65%), Gaps = 5/367 (1%)
 Frame = -2

Query: 2107 CKASRWKSIVL----RKKGNKIPWKVLRYFPLTPRLKRLCTIPWIAEKMRWHANSVGDED 1940
            C  SRW+  +          + P K+LRYFP+ PRL+RL      +E MRWH   +  ++
Sbjct: 233  CGESRWQPTISGHHEEATNKRAPRKILRYFPVIPRLQRLYMNSTTSEYMRWHKEGLVQDN 292

Query: 1939 YIRHPADSSAWKSVNRKWPEFSSQPRNVRLGLATDGFNPFGMNSNSYNCWPVMMVPYNLP 1760
             +RHPADS AWK V+  + +F++ PRN+RLGLA+DGFNPFGM + +Y  WPV+++PYNLP
Sbjct: 293  KMRHPADSKAWKHVDNIYKDFATDPRNIRLGLASDGFNPFGMVNVAYTIWPVILIPYNLP 352

Query: 1759 PSYCMT*EFTMLTLLIPGKTSPGDDIDVYLQPLIEELTKLWRVGSLAYDAYAKKTLTMKA 1580
            P  C+   F ML++LIPGK SPG++IDVYLQPLI+EL  LW  G   +DA  KK   ++A
Sbjct: 353  PWLCLKQPFWMLSMLIPGKNSPGNNIDVYLQPLIDELKDLWEKGVETWDAKEKKNFNLRA 412

Query: 1579 ILLWAIHDFPALGHLSGSRTGGKYACPVCSVHTDSIRLLHGKKEAYMATRRFLPDDHVFR 1400
            ILLW I+DFPA G LSG  T GK+ACP C   TD + L  G K  YM  RRFLP DH +R
Sbjct: 413  ILLWTINDFPAYGMLSGWSTKGKFACPYCHKDTDFLWLKCGSKHCYMGHRRFLPMDHRWR 472

Query: 1399 SQKMQFNGKEEHRKKPNRLTGYEVLIRVETF-PIVYGKLSKKRKRPAHDDENGSYAWSKK 1223
              K  FN   E R+ P  L+G  VL + E+F  I +GK ++KRK+   ++E   + W KK
Sbjct: 473  KNKASFNNTVETREPPVPLSGEGVLQQYESFEQITFGKSTRKRKQ--REEETRWHNWRKK 530

Query: 1222 SKLFDLPYWEELFIPHNVDVMHTEKNVVEHLLGTIMGTKEKNKDGLAARLDLKEM*IRYT 1043
            S  F+L YWE+L + HN+DVMH EKN+ + +LGT++G + K+KDG  ARLD++ + IR  
Sbjct: 531  SIFFELQYWEKLLVRHNLDVMHIEKNICDSILGTLLGMEGKSKDGEKARLDMEHLGIR-- 588

Query: 1042 CRIQHLI 1022
             + QH++
Sbjct: 589  -KDQHIV 594


>ref|XP_003631805.1| PREDICTED: uncharacterized protein LOC100248429 [Vitis vinifera]
          Length = 953

 Score =  347 bits (891), Expect = 6e-93
 Identities = 173/357 (48%), Positives = 232/357 (64%), Gaps = 4/357 (1%)
 Frame = -2

Query: 2107 CKASRWKSIVLRKKGNKI----PWKVLRYFPLTPRLKRLCTIPWIAEKMRWHANSVGDED 1940
            C  SRWK   +  +G KI    P KVL YFP  PR KR+      A+ + WHA     + 
Sbjct: 222  CGKSRWK---INSEGGKIKKGVPAKVLWYFPPIPRFKRMFQSSETAKHLMWHAKDKECDG 278

Query: 1939 YIRHPADSSAWKSVNRKWPEFSSQPRNVRLGLATDGFNPFGMNSNSYNCWPVMMVPYNLP 1760
             +RHP+DSSAWK V+  WP+F+S+PRN+RL L+TDG NP    S+ ++CWPV++V YNLP
Sbjct: 279  KLRHPSDSSAWKLVDHMWPDFASEPRNLRLALSTDGINPHKSMSSRHSCWPVILVIYNLP 338

Query: 1759 PSYCMT*EFTMLTLLIPGKTSPGDDIDVYLQPLIEELTKLWRVGSLAYDAYAKKTLTMKA 1580
            P  CM  +F ML+LLI G   PG +IDVYL PL+++L  LW  G   YDA+ ++  T+KA
Sbjct: 339  PWLCMKRKFMMLSLLISGPRQPGKNIDVYLSPLVDDLKTLWEKGVETYDAHLREVFTLKA 398

Query: 1579 ILLWAIHDFPALGHLSGSRTGGKYACPVCSVHTDSIRLLHGKKEAYMATRRFLPDDHVFR 1400
            I+LW I+DFPA G+L+G    G YACP+C   T S RL HG+K +YM  RRFLP +H +R
Sbjct: 399  IILWTINDFPAYGNLAGCTVKGYYACPICGEGTYSKRLKHGRKNSYMGHRRFLPRNHPYR 458

Query: 1399 SQKMQFNGKEEHRKKPNRLTGYEVLIRVETFPIVYGKLSKKRKRPAHDDENGSYAWSKKS 1220
             QK  FNG+++ R  P  L+G E+L +V+  PI +GK+  K    + + +  +  W KKS
Sbjct: 459  RQKKAFNGEQDFRIPPKILSGEEILEKVDLIPISWGKMKIK----SLESDVNTNCWKKKS 514

Query: 1219 KLFDLPYWEELFIPHNVDVMHTEKNVVEHLLGTIMGTKEKNKDGLAARLDLKEM*IR 1049
             LF+L YW+ L + HN+DVMH EKNV E ++GT+     K KDGL ARLDL EM +R
Sbjct: 515  ILFELEYWKYLHVRHNLDVMHIEKNVCESIIGTLFNIPGKTKDGLNARLDLVEMGLR 571


>ref|XP_003635639.1| PREDICTED: uncharacterized protein LOC100855364, partial [Vitis
            vinifera]
          Length = 564

 Score =  347 bits (889), Expect = 9e-93
 Identities = 168/352 (47%), Positives = 228/352 (64%), Gaps = 6/352 (1%)
 Frame = -2

Query: 2107 CKASRWKSIVLRKKGNK----IPWKVLRYFPLTPRLKRLCTIPWIAEKMRWHANSVGDED 1940
            C ASRWK   + ++G K    +P KV+ YFP  PR KR+     IA+ + WHA     + 
Sbjct: 221  CGASRWK---VNRRGTKKSKGVPAKVMWYFPPIPRFKRMFQSSKIAKDLIWHAQGGEFDG 277

Query: 1939 YIRHPADSSAWKSVNRKWPEFSSQPRNVRLGLATDGFNPFGMNSNSYNCWPVMMVPYNLP 1760
             +RHP+DS +WK ++ +WP+FS++PRN+RL ++ DG NP    S+ Y+CWPV+M+ YNLP
Sbjct: 278  KMRHPSDSPSWKVIDHRWPDFSAEPRNLRLAISADGINPHSSLSSRYSCWPVVMITYNLP 337

Query: 1759 PSYCMT*EFTMLTLLIPGKTSPGDDIDVYLQPLIEELTKLWRVGSLAYDAYAKKTLTMKA 1580
            P  CM  +F ML+LLI G   PG+DID+YL PLIE+L  LW  G  AYDAY ++  T++A
Sbjct: 338  PWLCMKRKFMMLSLLISGPQQPGNDIDIYLAPLIEDLKTLWETGVEAYDAYQREVFTLRA 397

Query: 1579 ILLWAIHDFPALGHLSGSRTGGKYACPVCSVHTDSIRLLHGKKEAYMATRRFLPDDHVFR 1400
            +LLW I+DFPA G+LSG    G +ACP+C   T S RL HG+K ++   RRFLP +H FR
Sbjct: 398  VLLWTINDFPAYGNLSGCTVKGYFACPICGSETYSHRLKHGRKNSFTGHRRFLPCNHPFR 457

Query: 1399 SQKMQFNGKEEHRKKPNRLTGYEVLIRVETFPIVYGKLSKKRKRPAHDDENGSYA--WSK 1226
              K  FNG++E R  P  L+G E+L+++      +GK     KR  HD  N +YA  W K
Sbjct: 458  KHKKAFNGEQEFRSPPQPLSGEEILLKMNAICNSWGK-----KRGRHDKSNVTYANCWKK 512

Query: 1225 KSKLFDLPYWEELFIPHNVDVMHTEKNVVEHLLGTIMGTKEKNKDGLAARLD 1070
            KS  F+L YW  L + HN+DVMH EKNV E ++GT++    K KDGL +RLD
Sbjct: 513  KSIFFELEYWRYLHVRHNLDVMHIEKNVCESIIGTLLNIPGKTKDGLNSRLD 564


>ref|XP_002265103.2| PREDICTED: uncharacterized protein LOC100241310 [Vitis vinifera]
          Length = 1456

 Score =  347 bits (889), Expect = 9e-93
 Identities = 166/359 (46%), Positives = 234/359 (65%), Gaps = 6/359 (1%)
 Frame = -2

Query: 2107 CKASRWKSIVLRKKGNK----IPWKVLRYFPLTPRLKRLCTIPWIAEKMRWHANSVGDED 1940
            C ASRWK   + ++G+K    +P KV+ YFP  PR +R+     IA+ + WHA     + 
Sbjct: 118  CGASRWK---VNRRGSKKSKGVPAKVMWYFPPIPRFRRMFQSSKIAKDLIWHAEGGEFDG 174

Query: 1939 YIRHPADSSAWKSVNRKWPEFSSQPRNVRLGLATDGFNPFGMNSNSYNCWPVMMVPYNLP 1760
             +RHP+DS +WK ++ +WP+F+++PRN+RL ++ DG NP    S+ Y+CWPV+M+ YNLP
Sbjct: 175  KMRHPSDSPSWKVIDHRWPDFAAEPRNLRLAISADGINPHSSLSSRYSCWPVVMITYNLP 234

Query: 1759 PSYCMT*EFTMLTLLIPGKTSPGDDIDVYLQPLIEELTKLWRVGSLAYDAYAKKTLTMKA 1580
            P  CM  +F ML+LLI G   PG+DID+YL PLIE+L  LW +G  AYDAY ++  T++A
Sbjct: 235  PWLCMKRKFMMLSLLISGPQQPGNDIDIYLAPLIEDLKTLWEIGVEAYDAYQREVFTLRA 294

Query: 1579 ILLWAIHDFPALGHLSGSRTGGKYACPVCSVHTDSIRLLHGKKEAYMATRRFLPDDHVFR 1400
            +LLW I+DFPA G+LSG    G +ACP+C   T S RL HG+K ++   RRFLP +H FR
Sbjct: 295  VLLWTINDFPAYGNLSGCTVKGYFACPICGPETYSHRLKHGRKNSFTGHRRFLPCNHPFR 354

Query: 1399 SQKMQFNGKEEHRKKPNRLTGYEVLIRVETFPIVYGKLSKKRKRPAHDDENGSY--AWSK 1226
              +  FNG++E R  P  L+G E+L+++      +GK     KR  H+  N +Y   W K
Sbjct: 355  KHRKAFNGEQEFRSPPQPLSGEEILLKMNAICNSWGK-----KRGRHEKSNVTYTNCWKK 409

Query: 1225 KSKLFDLPYWEELFIPHNVDVMHTEKNVVEHLLGTIMGTKEKNKDGLAARLDLKEM*IR 1049
            KS  F+L YW  L + HN+DVMH EKNV E ++GT++    K KDGL +RLDL +M +R
Sbjct: 410  KSIFFELEYWRYLHVRHNLDVMHIEKNVCESIIGTLLNIPGKTKDGLNSRLDLMDMGLR 468


>emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera]
          Length = 1736

 Score =  347 bits (889), Expect = 9e-93
 Identities = 170/354 (48%), Positives = 223/354 (62%), Gaps = 1/354 (0%)
 Frame = -2

Query: 2107 CKASRWKSIVLRKKGNK-IPWKVLRYFPLTPRLKRLCTIPWIAEKMRWHANSVGDEDYIR 1931
            C  SRWK      +  K IP KVL YFP  PR KR+   P IA+ ++WHA    +   +R
Sbjct: 221  CGMSRWKVNKAEARNTKRIPAKVLWYFPPIPRFKRMFQSPKIAKDLKWHAQGRENNGKLR 280

Query: 1930 HPADSSAWKSVNRKWPEFSSQPRNVRLGLATDGFNPFGMNSNSYNCWPVMMVPYNLPPSY 1751
            HP DS  W+ VN+ WPEF+S  RN+RL ++ DG NP    ++ ++CWPV+ + YNLPP  
Sbjct: 281  HPVDSPTWQLVNQMWPEFASDCRNLRLAISADGINPHSSMTSRHSCWPVLTITYNLPPWL 340

Query: 1750 CMT*EFTMLTLLIPGKTSPGDDIDVYLQPLIEELTKLWRVGSLAYDAYAKKTLTMKAILL 1571
            CM  +F ML+LLI G   PG DIDVYL PL+++L  LW VG  AYDA+ ++  T+KAILL
Sbjct: 341  CMKRKFMMLSLLISGPRQPGKDIDVYLAPLVDDLKTLWEVGVKAYDAHQQEFFTLKAILL 400

Query: 1570 WAIHDFPALGHLSGSRTGGKYACPVCSVHTDSIRLLHGKKEAYMATRRFLPDDHVFRSQK 1391
            W I+DFPA G+LSG    G YACP+C   T+S  L HG K +Y   RRFLP +H FR QK
Sbjct: 401  WTINDFPAYGNLSGCTVKGYYACPICGEETNSHWLKHGNKNSYTGHRRFLPCNHPFRKQK 460

Query: 1390 MQFNGKEEHRKKPNRLTGYEVLIRVETFPIVYGKLSKKRKRPAHDDENGSYAWSKKSKLF 1211
              FNG++E R  P  LTG E+  +V+     +GK  KK+ +      N +  W KKS  F
Sbjct: 461  KAFNGEQEFRLPPKELTGDEIFTKVDMIHNSWGK--KKKAKQCESFANPTSCWKKKSIFF 518

Query: 1210 DLPYWEELFIPHNVDVMHTEKNVVEHLLGTIMGTKEKNKDGLAARLDLKEM*IR 1049
            +L YW   +I HN+DVMH EKNV E ++GT++    K KDG+ +RLDL EM +R
Sbjct: 519  ELEYWRYFYIRHNLDVMHIEKNVCESIIGTLLNIPGKTKDGVKSRLDLLEMGLR 572


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