BLASTX nr result
ID: Coptis23_contig00015975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015975
(1592 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303410.1| predicted protein [Populus trichocarpa] gi|2... 516 e-144
ref|XP_003631893.1| PREDICTED: uncharacterized protein LOC100267... 514 e-143
ref|NP_001242667.1| uncharacterized protein LOC100788419 [Glycin... 508 e-141
gb|AFK38409.1| unknown [Medicago truncatula] 499 e-139
ref|XP_003629290.1| Ribosomal RNA small subunit methyltransferas... 499 e-138
>ref|XP_002303410.1| predicted protein [Populus trichocarpa] gi|222840842|gb|EEE78389.1|
predicted protein [Populus trichocarpa]
Length = 394
Score = 516 bits (1329), Expect = e-144
Identities = 265/406 (65%), Positives = 313/406 (77%), Gaps = 1/406 (0%)
Frame = +3
Query: 36 EKSAPTLPLPEAFIDFLNQNGLDQSIYXXXXXXXXPRYIRLKPTDGEVYVSEIEDELKCK 215
E+ LPLP+AF+DFL NG+D IY PRYIRLKP E Y+ EIE E+KC+
Sbjct: 2 EEETSKLPLPDAFLDFLQTNGIDPLIYTAIEST--PRYIRLKP-GSEAYLEEIEAEIKCR 58
Query: 216 VDKVDWLPGFYSLPPHIQIASTKCYKDGKIYGMDAASGAAVLALNVSPGDHVLDLCAAPG 395
+ K++WLPGFYSLPPHIQIA++K YK+GKIYG+DAASGAAVLAL++S GDHVLDLC APG
Sbjct: 59 LQKLNWLPGFYSLPPHIQIANSKPYKEGKIYGIDAASGAAVLALDISVGDHVLDLCCAPG 118
Query: 396 AKLCMXXXXXXXXXXXXXVDIARHRLAACRTMLQKYSLGDLCRLYVANGTLFSLLPLRDL 575
AKLCM VD+ARHRLAACRTMLQKY LGD CRL+VA+GT FSL+P+RD
Sbjct: 119 AKLCMISDLLGDSGSVTGVDVARHRLAACRTMLQKYVLGDACRLFVADGTTFSLMPVRDH 178
Query: 576 CDSKPYTDSGEKKCTGALSIEETKETFKEWKPKRSWKER-RASRARNGTPSQLVTGSQEP 752
DS C AL EE K+TF+EW +R WKER RA+RAR S+LV+ + P
Sbjct: 179 LDSI--------SCEFAL--EEKKDTFREWTSRRPWKERKRAARARENAASRLVSETDHP 228
Query: 753 ELIFYGRHSGVVGLSKNELFRISCSTDSPDSGYDKVLVDAECTHDGSIKHIHKFESWGWT 932
ELIFYG+ SGVVGLSK+EL++ S++ SGYDKVLVDAECTHDGSI+HI KFE WGW
Sbjct: 229 ELIFYGKASGVVGLSKDELYQTVSSSEVSSSGYDKVLVDAECTHDGSIRHIQKFEHWGWE 288
Query: 933 TLQRRVLDAKRTDILANLQLQLLTNGFRLLKVGGALVYSTCSLTVAQNEDVVEQFLSENP 1112
TL RVL+A+R+D L LQL+LL NGFRLL+VGG+LVYSTCSLTV+QNE+VVE FL EN
Sbjct: 289 TLNGRVLNAERSDNLTTLQLKLLINGFRLLRVGGSLVYSTCSLTVSQNENVVEWFLKENS 348
Query: 1113 SAELQVIDAAKDWPCRSGEIPKTLRFDPLTSQTSGLFMAKFTKCAV 1250
SA LQ I+AAKDWPC+SG IPKTLRFDP+TS+TSGLF+AKFTK AV
Sbjct: 349 SAALQEIEAAKDWPCKSGRIPKTLRFDPVTSKTSGLFVAKFTKLAV 394
>ref|XP_003631893.1| PREDICTED: uncharacterized protein LOC100267747 [Vitis vinifera]
Length = 395
Score = 514 bits (1324), Expect = e-143
Identities = 264/405 (65%), Positives = 308/405 (76%), Gaps = 2/405 (0%)
Frame = +3
Query: 39 KSAPTLPLPEAFIDFLNQNGLDQSIYXXXXXXXXPRYIRLKPTD-GEVYVSEIEDELKCK 215
+ A + LPEAF+DFL +NG+D SIY PRYIRLKP E + ++E E K K
Sbjct: 2 EEASAIGLPEAFLDFLKENGVDPSIYTTADST--PRYIRLKPGSISEAQIQQLEAEFKSK 59
Query: 216 VDKVDWLPGFYSLPPHIQIASTKCYKDGKIYGMDAASGAAVLALNVSPGDHVLDLCAAPG 395
++KV WLP FYSLPP I IA++ YK+GKIYG+DAASGAAV ALNVS GDHVLDLCAAPG
Sbjct: 60 LEKVGWLPNFYSLPPQIHIANSMAYKEGKIYGIDAASGAAVSALNVSEGDHVLDLCAAPG 119
Query: 396 AKLCMXXXXXXXXXXXXXVDIARHRLAACRTMLQKYSLGDLCRLYVANGTLFSLLPLRDL 575
AKLCM VD+ARHRLAACRTM+QKY+LGD CRL+VA+GT FSL+P+ +
Sbjct: 120 AKLCMTLDLIGNSGSVTGVDVARHRLAACRTMIQKYALGDRCRLFVADGTTFSLIPVMEH 179
Query: 576 CDSKPYTDSGEKKCTGALSIEETKETFKEWKPKRSWKERR-ASRARNGTPSQLVTGSQEP 752
DSK SGE G + + FKEW KR WKER+ A +AR G SQLV G Q+P
Sbjct: 180 SDSK----SGEFASKGKVDV------FKEWTSKRPWKERKNAKKAREGIGSQLVPGIQDP 229
Query: 753 ELIFYGRHSGVVGLSKNELFRISCSTDSPDSGYDKVLVDAECTHDGSIKHIHKFESWGWT 932
ELIFYG HSGV+GLS+ EL++I+C ++ GYDKVLVDAECTHDGSI+HI KF+ WGW
Sbjct: 230 ELIFYGWHSGVIGLSRTELYKIACDSEVLKCGYDKVLVDAECTHDGSIRHIQKFDHWGWE 289
Query: 933 TLQRRVLDAKRTDILANLQLQLLTNGFRLLKVGGALVYSTCSLTVAQNEDVVEQFLSENP 1112
TL+RRVLDA+RTD L LQ +LL+NGFRLLKVGG+LVYSTCSLT AQNEDVVEQFL EN
Sbjct: 290 TLERRVLDAERTDSLTVLQFRLLSNGFRLLKVGGSLVYSTCSLTAAQNEDVVEQFLRENA 349
Query: 1113 SAELQVIDAAKDWPCRSGEIPKTLRFDPLTSQTSGLFMAKFTKCA 1247
SAELQ IDAA +WPC+SG IPKTLRFDPLTSQTSGLF+AKFTK A
Sbjct: 350 SAELQEIDAATNWPCKSGGIPKTLRFDPLTSQTSGLFVAKFTKLA 394
>ref|NP_001242667.1| uncharacterized protein LOC100788419 [Glycine max]
gi|255642235|gb|ACU21382.1| unknown [Glycine max]
Length = 392
Score = 508 bits (1307), Expect = e-141
Identities = 257/406 (63%), Positives = 305/406 (75%)
Frame = +3
Query: 33 EEKSAPTLPLPEAFIDFLNQNGLDQSIYXXXXXXXXPRYIRLKPTDGEVYVSEIEDELKC 212
EE+ A PLP+AF+ FL NGLD SIY PRYIRLKP E + E+E E+KC
Sbjct: 2 EEEHAAKAPLPDAFLQFLETNGLDPSIYTAIDST--PRYIRLKP-GFESCIEEVEAEVKC 58
Query: 213 KVDKVDWLPGFYSLPPHIQIASTKCYKDGKIYGMDAASGAAVLALNVSPGDHVLDLCAAP 392
K++K++WLPGFYSLPPH+QIA ++ Y++GKIYG+DAASGAAV+ALN+SPGDHVLDLCAAP
Sbjct: 59 KLEKLEWLPGFYSLPPHVQIAGSRAYREGKIYGIDAASGAAVMALNISPGDHVLDLCAAP 118
Query: 393 GAKLCMXXXXXXXXXXXXXVDIARHRLAACRTMLQKYSLGDLCRLYVANGTLFSLLPLRD 572
GAKLCM VD+ARHRLAACRTMLQKY +G CRL+VA+GT FS++P
Sbjct: 119 GAKLCMILDLLGDSGSVAGVDVARHRLAACRTMLQKYMIGGRCRLFVADGTAFSVIP-SG 177
Query: 573 LCDSKPYTDSGEKKCTGALSIEETKETFKEWKPKRSWKERRASRARNGTPSQLVTGSQEP 752
C +SG +E + FKEW +R WKER+ + ++GT +QLV+ SQ P
Sbjct: 178 FCSDCKSCESG---------LEGRVDVFKEWTSRRPWKERKKAN-KSGT-AQLVSRSQPP 226
Query: 753 ELIFYGRHSGVVGLSKNELFRISCSTDSPDSGYDKVLVDAECTHDGSIKHIHKFESWGWT 932
ELI+YG+HSGVVGL+K EL+R + + GYDKVLVDAECTHDGS+KHI KFE WGW
Sbjct: 227 ELIYYGQHSGVVGLTKGELYRTLSDNEIANHGYDKVLVDAECTHDGSVKHIQKFEDWGWG 286
Query: 933 TLQRRVLDAKRTDILANLQLQLLTNGFRLLKVGGALVYSTCSLTVAQNEDVVEQFLSENP 1112
TLQRRVLDA+RTD L LQL LLTNGFRLL VGG+LVYSTCSLT+AQNEDVVEQFL EN
Sbjct: 287 TLQRRVLDAERTDDLHTLQLNLLTNGFRLLNVGGSLVYSTCSLTIAQNEDVVEQFLKENE 346
Query: 1113 SAELQVIDAAKDWPCRSGEIPKTLRFDPLTSQTSGLFMAKFTKCAV 1250
+AEL IDAA DWPC+ G IPKT RFDPLTSQTSGLF+AKFTK +
Sbjct: 347 TAELTEIDAASDWPCKGGRIPKTWRFDPLTSQTSGLFVAKFTKVVI 392
>gb|AFK38409.1| unknown [Medicago truncatula]
Length = 389
Score = 499 bits (1285), Expect = e-139
Identities = 256/408 (62%), Positives = 302/408 (74%), Gaps = 3/408 (0%)
Frame = +3
Query: 36 EKSAPTLPLPEAFIDFLNQNGLDQSIYXXXXXXXXPRYIRLKPTDGEVYVSEIEDELKCK 215
E A T LP+AF++FL NG+D SIY PRYIRLKP E Y+ E E E+KCK
Sbjct: 2 EHGAATAALPDAFLNFLESNGIDPSIYTSIDST--PRYIRLKP-GFEDYIEEFESEVKCK 58
Query: 216 VDKVDWLPGFYSLPPHIQIASTKCYKDGKIYGMDAASGAAVLALNVSPGDHVLDLCAAPG 395
K+DWLPGFY+LPP+IQIASTK Y++GKIYG+DA+SGAAV+AL + PGDHVLDLCAAPG
Sbjct: 59 PQKLDWLPGFYTLPPNIQIASTKAYQEGKIYGIDASSGAAVMALGIEPGDHVLDLCAAPG 118
Query: 396 AKLCMXXXXXXXXXXXXXVDIARHRLAACRTMLQKYSLGDLCRLYVANGTLFSLLPL--- 566
AKLCM VD ARHRLAACRTMLQKY LGD CRL+VA+GT FS++PL
Sbjct: 119 AKLCMMLDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSVIPLGFC 178
Query: 567 RDLCDSKPYTDSGEKKCTGALSIEETKETFKEWKPKRSWKERRASRARNGTPSQLVTGSQ 746
D C+S+ +EE + FKEW +R WKER+ ++ + GTP Q+V+ S
Sbjct: 179 SDSCESR---------------LEERMDVFKEWTSRRPWKERKRTK-KCGTP-QVVSKSH 221
Query: 747 EPELIFYGRHSGVVGLSKNELFRISCSTDSPDSGYDKVLVDAECTHDGSIKHIHKFESWG 926
PELI+YG HSGV+GL+K EL++ + + GYDKVLVDAECTHDGSIKHI KFE WG
Sbjct: 222 PPELIYYGGHSGVIGLTKGELYKTASKNEIASYGYDKVLVDAECTHDGSIKHIQKFEQWG 281
Query: 927 WTTLQRRVLDAKRTDILANLQLQLLTNGFRLLKVGGALVYSTCSLTVAQNEDVVEQFLSE 1106
W TLQRRVLDA+RTD L LQL LLTNGFRLLKVGG+LVYSTCSLTVAQNEDV+EQFL E
Sbjct: 282 WITLQRRVLDAERTDDLHALQLNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVMEQFLKE 341
Query: 1107 NPSAELQVIDAAKDWPCRSGEIPKTLRFDPLTSQTSGLFMAKFTKCAV 1250
N +AEL IDAA++WPC+ G I KT RFDPLTSQTSGLF+AKF K +
Sbjct: 342 NITAELTEIDAARNWPCKGGRIRKTWRFDPLTSQTSGLFVAKFRKAVI 389
>ref|XP_003629290.1| Ribosomal RNA small subunit methyltransferase, putative [Medicago
truncatula] gi|355523312|gb|AET03766.1| Ribosomal RNA
small subunit methyltransferase, putative [Medicago
truncatula]
Length = 389
Score = 499 bits (1284), Expect = e-138
Identities = 256/408 (62%), Positives = 302/408 (74%), Gaps = 3/408 (0%)
Frame = +3
Query: 36 EKSAPTLPLPEAFIDFLNQNGLDQSIYXXXXXXXXPRYIRLKPTDGEVYVSEIEDELKCK 215
E A T LP+AF++FL NG+D SIY PRYIRLKP E Y+ E E E+KCK
Sbjct: 2 EHGAATAALPDAFLNFLESNGIDPSIYTSIDST--PRYIRLKP-GFEDYIEEFESEVKCK 58
Query: 216 VDKVDWLPGFYSLPPHIQIASTKCYKDGKIYGMDAASGAAVLALNVSPGDHVLDLCAAPG 395
K+DWLPGFY+LPP+IQIASTK Y++GKIYG+DA+SGAAV+AL + PGDHVLDLCAAPG
Sbjct: 59 PQKLDWLPGFYTLPPNIQIASTKAYQEGKIYGIDASSGAAVMALGIEPGDHVLDLCAAPG 118
Query: 396 AKLCMXXXXXXXXXXXXXVDIARHRLAACRTMLQKYSLGDLCRLYVANGTLFSLLPL--- 566
AKLCM VD ARHRLAACRTMLQKY LGD CRL+VA+GT FS++PL
Sbjct: 119 AKLCMMLDLLGDSGSVTGVDAARHRLAACRTMLQKYKLGDRCRLFVADGTTFSVIPLGFC 178
Query: 567 RDLCDSKPYTDSGEKKCTGALSIEETKETFKEWKPKRSWKERRASRARNGTPSQLVTGSQ 746
D C+S+ +EE + FKEW +R WKER+ ++ + GTP Q+V+ S
Sbjct: 179 SDSCESR---------------LEERMDVFKEWTSRRPWKERKRTK-KCGTP-QVVSKSH 221
Query: 747 EPELIFYGRHSGVVGLSKNELFRISCSTDSPDSGYDKVLVDAECTHDGSIKHIHKFESWG 926
PELI+YG HSGV+GL+K EL++ + + GYDKVLVDAECTHDGSIKHI KFE WG
Sbjct: 222 PPELIYYGGHSGVIGLTKGELYKTASKNEIASYGYDKVLVDAECTHDGSIKHIQKFEQWG 281
Query: 927 WTTLQRRVLDAKRTDILANLQLQLLTNGFRLLKVGGALVYSTCSLTVAQNEDVVEQFLSE 1106
W TLQRRVLDA+RTD L LQL LLTNGFRLLKVGG+LVYSTCSLTVAQNEDV+EQFL E
Sbjct: 282 WITLQRRVLDAERTDDLHALQLNLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVMEQFLKE 341
Query: 1107 NPSAELQVIDAAKDWPCRSGEIPKTLRFDPLTSQTSGLFMAKFTKCAV 1250
N +AEL IDAA++WPC+ G I KT RFDPLTSQTSGLF+AKF K +
Sbjct: 342 NITAELTEIDAARNWPCKGGRIRKTWRFDPLTSQTSGLFVAKFRKVVI 389