BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015973
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   177   2e-42
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   175   9e-42
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   174   2e-41
dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]    162   6e-38
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   162   8e-38

>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  177 bits (448), Expect = 2e-42
 Identities = 84/145 (57%), Positives = 110/145 (75%)
 Frame = -3

Query: 435 HPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDRLRGSDLKSLLRNRKXXXXXX 256
           HPG FGDMC+ CG  + + + V  GYIHK L++ +DE+ RLR +D+K+LLR+RK      
Sbjct: 113 HPGSFGDMCILCGERLIEETGVTFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLD 172

Query: 255 XXXXXLNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERMHMMTKLRPFVRTFLREAS 76
                LNST+L  L+ EE+YL +QIDS+QD+  GSLF ++ MHMMTKLRPF+RTFL+EAS
Sbjct: 173 LDHTLLNSTQLMHLTAEEEYLKSQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEAS 232

Query: 75  SMYEMYIYTMGEKAYALQMADLLDP 1
            M+EMYIYTMG++AYAL+MA  LDP
Sbjct: 233 QMFEMYIYTMGDRAYALEMAKFLDP 257


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score =  175 bits (443), Expect = 9e-42
 Identities = 91/163 (55%), Positives = 114/163 (69%)
 Frame = -3

Query: 489 KQKSEASLENEQCCLEGRHPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDRLR 310
           K+  EAS E + CC    HPG FG+MC+RCG  ++  S V  GYIHK L++  +E+ RLR
Sbjct: 71  KRSLEASSEVDVCCT---HPGSFGNMCIRCGQKLDGESGVTFGYIHKGLRLHDEEISRLR 127

Query: 309 GSDLKSLLRNRKXXXXXXXXXXXLNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERM 130
            +D+KSLL  +K           LNST L  L+ EE +L NQ DSL ++ KGSLFKLE M
Sbjct: 128 NTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEELHLLNQTDSLTNVSKGSLFKLEHM 187

Query: 129 HMMTKLRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDP 1
           +MMTKLRPFVR FL+EAS M+EMYIYTMG++ YAL+MA LLDP
Sbjct: 188 NMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDP 230


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score =  174 bits (440), Expect = 2e-41
 Identities = 91/165 (55%), Positives = 115/165 (69%), Gaps = 2/165 (1%)
 Frame = -3

Query: 489 KQKSEASLENEQCCLEG--RHPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDR 316
           ++K E+  E E    EG   HPG FG+MC+RCG  ++  S V  GYIHK L++  +E+ R
Sbjct: 52  RRKFESIEETEGSTSEGVCTHPGSFGNMCIRCGQKLDGESGVTFGYIHKGLRLHDEEISR 111

Query: 315 LRGSDLKSLLRNRKXXXXXXXXXXXLNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLE 136
           LR +D+KSLL  +K           LNST L  L+ EE +L NQ DSL+D+ KGSLFKLE
Sbjct: 112 LRNTDMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEESHLLNQTDSLRDVSKGSLFKLE 171

Query: 135 RMHMMTKLRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDP 1
            M+MMTKLRPFVR FL+EAS M+EMYIYTMG++ YAL+MA LLDP
Sbjct: 172 HMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDP 216


>dbj|BAJ87495.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score =  162 bits (410), Expect = 6e-38
 Identities = 85/164 (51%), Positives = 111/164 (67%), Gaps = 2/164 (1%)
 Frame = -3

Query: 486 QKSEASLENEQCCLEGRHPGFFGDMCVRCGVIVN--DASAVPVGYIHKNLKIVSDEMDRL 313
           + S  S ++ Q  +   HPGFFG +C RCG   +  D   V  GY+HK L++ + E+DRL
Sbjct: 92  EDSIGSFKDAQIKICPPHPGFFGGLCFRCGKRQDEEDVPGVAFGYVHKGLRLGTSEIDRL 151

Query: 312 RGSDLKSLLRNRKXXXXXXXXXXXLNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLER 133
           RGSDLK+LLR RK           +NST+L D+S  E+ L  Q  + +D P GSLF LE 
Sbjct: 152 RGSDLKNLLRERKLILILDLDHTLINSTKLHDISAAENNLGIQAAASKDDPNGSLFTLEG 211

Query: 132 MHMMTKLRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDP 1
           M M+TKLRPFVR FL+EAS+M+EMYIYTMG+KAYA+++A LLDP
Sbjct: 212 MQMLTKLRPFVRKFLKEASNMFEMYIYTMGDKAYAIEIAKLLDP 255


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score =  162 bits (409), Expect = 8e-38
 Identities = 81/163 (49%), Positives = 111/163 (68%)
 Frame = -3

Query: 489 KQKSEASLENEQCCLEGRHPGFFGDMCVRCGVIVNDASAVPVGYIHKNLKIVSDEMDRLR 310
           +++S   L  +Q C    HPG FG+MC+ CG  +++ S V  GYIHK L++ +DE++R+R
Sbjct: 69  EEQSLEVLSKQQLC---SHPGSFGNMCIICGQRLDEESGVTFGYIHKELRLNNDEINRMR 125

Query: 309 GSDLKSLLRNRKXXXXXXXXXXXLNSTRLFDLSPEEDYLNNQIDSLQDIPKGSLFKLERM 130
             ++K LL+ +K           LNST L  L+ EE+YL +Q DSL D+ KGSLF L  +
Sbjct: 126 NKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEEEYLRSQTDSLDDVTKGSLFLLNSV 185

Query: 129 HMMTKLRPFVRTFLREASSMYEMYIYTMGEKAYALQMADLLDP 1
           H MTKLRPFV +FL+EAS ++EMYIYTMGE+ YA +MA LLDP
Sbjct: 186 HTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFEMAKLLDP 228