BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015950
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36

>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  167 bits (424), Expect = 6e-40
 Identities = 82/167 (49%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
 Frame = +2

Query: 5   YHLATVGG--DAVLMMSEMKASGHIPDSKTWTALIFGQCVAGDVKKASNSVRTMVKNFGI 178
           Y L   G    A   M+ ++ SG  P  KTW +LI G CVAG++ KA  S + +V+  G+
Sbjct: 408 YRLGAAGNKEQAHEFMNRIEVSGSNPYRKTWESLIQGYCVAGNLDKAFESFKEIVEKEGV 467

Query: 179 TDAGPAFEEVVNGFCQQRKTIEAYKFLFKTVREHHLKPQHSTYKMLIRKLLAEGRFNEAL 358
             AG +F  ++N +CQ  + ++A K L + V E  LKP HSTYK+L+ KLL +G F +AL
Sbjct: 468 ASAGYSFNVLMNSYCQMNRAVDASKILCRLVNEKQLKPWHSTYKLLVTKLLVQGGFTDAL 527

Query: 359 ILLGLMNGHGFSPFLDPFIDHISKSGSGDDAISFLNAVTNKKFPSTN 499
            +LGLM  HGF PF DPFI+H+SKSGSGDDA+ FL A+T+K+FPST+
Sbjct: 528 NILGLMRTHGFPPFTDPFIEHLSKSGSGDDAVLFLKAMTSKRFPSTS 574


>ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Cucumis sativus]
          Length = 656

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/166 (48%), Positives = 110/166 (66%), Gaps = 2/166 (1%)
 Frame = +2

Query: 5   YHLATVG--GDAVLMMSEMKASGHIPDSKTWTALIFGQCVAGDVKKASNSVRTMVKNFGI 178
           Y L+  G   +A   M+ ++ASG  PD+KTW +LI G C AGD+ KAS+ +  MV+  G+
Sbjct: 435 YRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGV 494

Query: 179 TDAGPAFEEVVNGFCQQRKTIEAYKFLFKTVREHHLKPQHSTYKMLIRKLLAEGRFNEAL 358
             A  A + +VNG+CQ++   +A   LF  V +  LKP+HSTYK LI KLL  G F +AL
Sbjct: 495 PSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLCGEFKDAL 554

Query: 359 ILLGLMNGHGFSPFLDPFIDHISKSGSGDDAISFLNAVTNKKFPST 496
            LLG+M  H F PF++PFI ++SKSG+ DD + FL  +T+KKFPST
Sbjct: 555 KLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST 600


>ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Cucumis sativus]
          Length = 656

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/166 (48%), Positives = 110/166 (66%), Gaps = 2/166 (1%)
 Frame = +2

Query: 5   YHLATVG--GDAVLMMSEMKASGHIPDSKTWTALIFGQCVAGDVKKASNSVRTMVKNFGI 178
           Y L+  G   +A   M+ ++ASG  PD+KTW +LI G C AGD+ KAS+ +  MV+  G+
Sbjct: 435 YRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGV 494

Query: 179 TDAGPAFEEVVNGFCQQRKTIEAYKFLFKTVREHHLKPQHSTYKMLIRKLLAEGRFNEAL 358
             A  A + +VNG+CQ++   +A   LF  V +  LKP+HSTYK LI KLL  G F +AL
Sbjct: 495 PSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLCGEFKDAL 554

Query: 359 ILLGLMNGHGFSPFLDPFIDHISKSGSGDDAISFLNAVTNKKFPST 496
            LLG+M  H F PF++PFI ++SKSG+ DD + FL  +T+KKFPST
Sbjct: 555 KLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPST 600


>ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Glycine max]
          Length = 628

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/167 (47%), Positives = 111/167 (66%), Gaps = 2/167 (1%)
 Frame = +2

Query: 5   YHLATVGG--DAVLMMSEMKASGHIPDSKTWTALIFGQCVAGDVKKASNSVRTMVKNFGI 178
           Y L   G    A   M+ ++AS   PD KTW +LI G CVAG++ KA  S + +V+  G+
Sbjct: 407 YRLGAAGNKEQAHEFMNRIEASRSSPDRKTWDSLIEGHCVAGNLDKAFESFKEIVEKEGV 466

Query: 179 TDAGPAFEEVVNGFCQQRKTIEAYKFLFKTVREHHLKPQHSTYKMLIRKLLAEGRFNEAL 358
             AG +F+ ++N +CQ  + ++A K L + V E  LKP HSTYK+L+ KLL +G F +AL
Sbjct: 467 ASAGYSFDVLMNSYCQMNRAVDASKILCRLVNEKKLKPWHSTYKLLVTKLLVQGGFTDAL 526

Query: 359 ILLGLMNGHGFSPFLDPFIDHISKSGSGDDAISFLNAVTNKKFPSTN 499
            +LGLM   GF PF DPFI+H+SKSGSG+ A  FL A+T+K+FPST+
Sbjct: 527 NILGLMRTLGFPPFTDPFIEHLSKSGSGNAAALFLKAMTSKRFPSTS 573


>ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|222870762|gb|EEF07893.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/155 (48%), Positives = 108/155 (69%)
 Frame = +2

Query: 29  DAVLMMSEMKASGHIPDSKTWTALIFGQCVAGDVKKASNSVRTMVKNFGITDAGPAFEEV 208
           +A+  +  M++SG   D+K W +LI G CV+GD++KAS+  + MV+  G+T AG A E +
Sbjct: 447 EAIEFVDHMESSGSDLDNKAWASLIEGHCVSGDLEKASDCFKKMVEKKGVTGAGYAVELL 506

Query: 209 VNGFCQQRKTIEAYKFLFKTVREHHLKPQHSTYKMLIRKLLAEGRFNEALILLGLMNGHG 388
           VN +C + +  +A   L   V ++ L P  +TYK+LI KLLA+G F +AL LLGLM  HG
Sbjct: 507 VNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKLLAQGGFKDALNLLGLMQSHG 566

Query: 389 FSPFLDPFIDHISKSGSGDDAISFLNAVTNKKFPS 493
             P++DPF + +SKSG+GDDAI+F+NA+T KKFPS
Sbjct: 567 IPPYIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPS 601