BLASTX nr result

ID: Coptis23_contig00015949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015949
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865...    80   1e-13
ref|XP_002530319.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...    75   4e-12
ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865...    72   4e-11
ref|NP_001241249.1| uncharacterized protein LOC100781497 [Glycin...    72   4e-11

>ref|XP_002276568.1| PREDICTED: uncharacterized protein At5g39865-like [Vitis vinifera]
          Length = 398

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/72 (58%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 GGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALFREQLKELMG--Y 38
           GG N+V++YTTT  G R+ F+D N VRS+L+SH+I MFERDI  D+  +E+L+ LMG   
Sbjct: 251 GGANAVVIYTTTLRGIRKTFEDCNHVRSILESHHIHMFERDISMDSGLKEELRGLMGTKE 310

Query: 37  IKVPLMFVKGRL 2
           +KVPL+FVKGRL
Sbjct: 311 VKVPLVFVKGRL 322


>ref|XP_002530319.1| conserved hypothetical protein [Ricinus communis]
           gi|223530123|gb|EEF32035.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 GGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALFREQLKELMG--Y 38
           GG N+V+LYTTT  G R+ F+D N VRS+++SH+I M ERDI  D+  +E+L+ LMG   
Sbjct: 279 GGENAVVLYTTTLRGIRKTFEDCNTVRSIIESHHIHMLERDISMDSGLKEELRRLMGTKV 338

Query: 37  IKVPLMFVKGRL 2
           +KVPL+FVKGRL
Sbjct: 339 VKVPLVFVKGRL 350


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/72 (52%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 GGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALFREQLKELMG--Y 38
           GG N V++YTTT  G R+ F+D N  RS+++SH+I + ERD+  D+ F+E+L+ LMG   
Sbjct: 259 GGENKVVIYTTTLRGIRKTFEDCNTARSIIESHHIHIVERDVSMDSGFKEELRRLMGTKE 318

Query: 37  IKVPLMFVKGRL 2
           +KVPL+FVKGRL
Sbjct: 319 VKVPLVFVKGRL 330


>ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 398

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/71 (49%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
 Frame = -1

Query: 208 GGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALFREQLKELMG--Y 38
           GG N V++YTTT  G R+ F++ NKVRS+++S+ + + ERD+  D+ F+E+L++LMG   
Sbjct: 250 GGENCVVIYTTTLRGIRKTFEECNKVRSIIESYCVHVLERDVSMDSRFKEELRKLMGTEQ 309

Query: 37  IKVPLMFVKGR 5
           +KVP++FVKGR
Sbjct: 310 VKVPVVFVKGR 320


>ref|NP_001241249.1| uncharacterized protein LOC100781497 [Glycine max]
           gi|255637067|gb|ACU18865.1| unknown [Glycine max]
          Length = 398

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/72 (50%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 GGGNSVILYTTT-GGNREPFKDSNKVRSMLQSHYIQMFERDIFKDALFREQLKELMG--Y 38
           GG N V++YTTT  G R+ F++ NKVRS+++S+ + + ERD+  D+ F+E+L++LMG   
Sbjct: 249 GGENCVVIYTTTLRGIRKTFEECNKVRSIVESYCVHVVERDVSMDSGFKEELRKLMGTKQ 308

Query: 37  IKVPLMFVKGRL 2
           +KVP++FVKGRL
Sbjct: 309 VKVPVVFVKGRL 320


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