BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015937
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    66   3e-09
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            64   1e-08
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    64   1e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        64   1e-08

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +3

Query: 18  EDTIWVDWTWKQHIKDFFFWSMSIPKDCSWTWRNALNTRVVAKKFIKYLIANGENTLLWH 197
           + +IW  W     ++   FW++  P++CSW W   L  R +A   +KY+I +G  T LW 
Sbjct: 186 DGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWF 245

Query: 198 DIWCSRSPLIQDVEAMAAWNFPL--NSKVSVLMTNGSW 305
           D W   SPL         ++  +  N+KV+VL+ N  W
Sbjct: 246 DNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 283


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   KLVTREDTIWVDWTWKQHIKDFFFWSMSIPKDC-SWTWRNALNTRVVAKKFIKYLIANGE 179
           +L++ +D++WV WT    +K   FWS+       SW WR  L  R VAK F K  + NG 
Sbjct: 614 RLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGV 673

Query: 180 NTLLWHDIWCSRSPLIQDVEAMAA 251
           NT  W D W  + PLI    A  A
Sbjct: 674 NTSFWFDNWSEKGPLINLTGARGA 697


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = +3

Query: 6    LVTREDTIWVDWTWKQHIKDFFFWSMSIPKDCSWTWRNALNTRVVAKKFIKYLIANGENT 185
            L  R+ ++W  W     +    FW ++  +   WTW+  LN R +A+KFIK  + NG   
Sbjct: 747  LFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTV 806

Query: 186  LLWHDIWCSRSPLIQDVEAMAA--WNFPLNSKVSVLMTNGSW 305
              W D W S  PLI+ +  + +     P ++KV+  +    W
Sbjct: 807  SFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGW 848


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
 Frame = +3

Query: 6    LVTREDTIWVDWTWKQHIKDFFFWSMSIPKDCSWTWRNALNTRVVAKKFIKYLIANGENT 185
            L  R+ ++W  W     +    FW ++  +   WTW+  LN R +A+KFIK  + NG   
Sbjct: 747  LFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTV 806

Query: 186  LLWHDIWCSRSPLIQDVEAMAA--WNFPLNSKVSVLMTNGSW 305
              W D W S  PLI+ +  + +     P ++KV+  +    W
Sbjct: 807  SFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGW 848


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = +3

Query: 3    KLVTREDTIWVDWTWKQHIKDFFFWSMSIPKDCSWTWRNALNTRVVAKKFIKYLIANGEN 182
            +L   +D++W DW    H+    FW++   +  SWTW+  L+ R +A +F+   + NG  
Sbjct: 886  RLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLK 945

Query: 183  TLLWHDIWCSRSPLIQDVEAM--AAWNFPLNSKVSVLMTNGSW 305
               W+D W S  PL + +  +  ++   PL +KV+   +   W
Sbjct: 946  ADYWYDNWTSLGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGW 988