BLASTX nr result

ID: Coptis23_contig00015927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015927
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricin...   117   3e-24
ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   109   4e-22
ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   108   1e-21
ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   107   2e-21
ref|XP_002316872.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21

>ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
           gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase,
           putative [Ricinus communis]
          Length = 644

 Score =  117 bits (292), Expect = 3e-24
 Identities = 79/203 (38%), Positives = 100/203 (49%)
 Frame = +1

Query: 1   YSPDSGHYYAYIKDAMGRWYCCNDSFVSISNLQEVVSEKVYILFFARSNQRPRPTKSPSV 180
           YSP+SGHYYAYIKDA GRWYCCNDS+V++S +Q+V+SEKVYILFF+RSNQRP  +  PS 
Sbjct: 301 YSPESGHYYAYIKDATGRWYCCNDSYVTLSTMQDVLSEKVYILFFSRSNQRP-GSAGPSF 359

Query: 181 TTGVEPPHCNDHDASSSVTNGVKPPSCNGHDASSSVTNGVKPPHCNGHDASSSVANGAKP 360
           T                    +KP + NG +AS+     V P   N  DA +SV      
Sbjct: 360 TP-------------------IKPCNPNGCEASNISKVTVSP---NAVDAEASV------ 391

Query: 361 QYYNGHAASYSVPNEVKPLHSNGCNAPQSMRRAVPPKPVVMGSYGPDNSKKLIPTISKND 540
                                      Q  R+ +P                   ++SK D
Sbjct: 392 --------------------------EQPSRKDIP-------------------SMSKVD 406

Query: 541 KVPSSPRIKFNILKSSDSKELRP 609
           KVPSSPR+KFNI  +S SK + P
Sbjct: 407 KVPSSPRVKFNIFGNSLSKRILP 429


>ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
           max]
          Length = 641

 Score =  109 bits (273), Expect = 4e-22
 Identities = 52/93 (55%), Positives = 66/93 (70%)
 Frame = +1

Query: 1   YSPDSGHYYAYIKDAMGRWYCCNDSFVSISNLQEVVSEKVYILFFARSNQRPRPTKSPSV 180
           YSP+SGHYYAYIKDAMGRWYCC+DS V+++ LQEV+SEKVYILFF+R+NQRP  + +   
Sbjct: 289 YSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPVSSSNSLA 348

Query: 181 TTGVEPPHCNDHDASSSVTNGVKPPSCNGHDAS 279
           + GV+ PH N    S     GV P + +    S
Sbjct: 349 SNGVK-PHSNGSQTSECPKVGVPPKAVHAKSNS 380


>ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
           max]
          Length = 652

 Score =  108 bits (269), Expect = 1e-21
 Identities = 51/84 (60%), Positives = 63/84 (75%)
 Frame = +1

Query: 1   YSPDSGHYYAYIKDAMGRWYCCNDSFVSISNLQEVVSEKVYILFFARSNQRPRPTKSPSV 180
           YSP+SGHYYAYIKDAMGRWYCC+DS V+++ LQEV+SEKVYILFF+R+NQRP  + +   
Sbjct: 290 YSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPVASCNSLA 349

Query: 181 TTGVEPPHCNDHDASSSVTNGVKP 252
           + GV+ PH N    S     GV P
Sbjct: 350 SNGVK-PHSNGSQTSECPKVGVPP 372


>ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
           sativus] gi|449519156|ref|XP_004166601.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
           sativus]
          Length = 646

 Score =  107 bits (268), Expect = 2e-21
 Identities = 69/183 (37%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
 Frame = +1

Query: 1   YSPDSGHYYAYIKDAMGRWYCCNDSFVSISNLQEVVSEKVYILFFARSNQRPRPTKSPSV 180
           +S +SGHYYAYIKDA GRWYCCNDS+V++S LQEV+SEKVYILFF+R+NQRP    +   
Sbjct: 293 FSAESGHYYAYIKDASGRWYCCNDSYVTVSTLQEVLSEKVYILFFSRTNQRPVTASTALA 352

Query: 181 TTGVEPPHCNDHDAS-----SSVTNGVKPPSCNGHDASSSVTNGVKPPHCNGHDASSSVA 345
           + GV+   CN  D S     S VT   +  S     +   +++  K           S  
Sbjct: 353 SNGVKSHECNRSDGSKVSKHSVVTKTAQTRSHVEQSSRKELSSLSKVDKPTFSSRGKSNM 412

Query: 346 NGAKPQYYNGHAASYSVPNEV--KPLHSNGCNAPQSMRRAVPPKPVVMG-----SYGPDN 504
           NG      NGH+ +   P+ +  K +     +  ++ +  V   P+  G     S G  N
Sbjct: 413 NGHSNM--NGHSNTIRAPSTINGKIVLEEDQSIKENEKENVNSLPLENGARHKSSLGNGN 470

Query: 505 SKK 513
           SKK
Sbjct: 471 SKK 473


>ref|XP_002316872.1| predicted protein [Populus trichocarpa] gi|222859937|gb|EEE97484.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  107 bits (266), Expect = 3e-21
 Identities = 47/70 (67%), Positives = 57/70 (81%)
 Frame = +1

Query: 1   YSPDSGHYYAYIKDAMGRWYCCNDSFVSISNLQEVVSEKVYILFFARSNQRPRPTKSPSV 180
           YSP+SGHYYAYIKDAMGRWYCCNDS+V++S LQEV+SEKVY+LFF+R+NQRP    S   
Sbjct: 294 YSPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLSEKVYVLFFSRTNQRPASAASSFA 353

Query: 181 TTGVEPPHCN 210
           + GV+    N
Sbjct: 354 SYGVKSCESN 363


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