BLASTX nr result
ID: Coptis23_contig00015917
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015917
(383 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15105.3| unnamed protein product [Vitis vinifera] 216 2e-54
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 216 2e-54
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,... 211 4e-53
ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containi... 211 5e-53
ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containi... 209 1e-52
>emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 216 bits (550), Expect = 2e-54
Identities = 106/127 (83%), Positives = 119/127 (93%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R+MNE GI+PDITT++ LVETFGKL +LEKVSELLKEMES G+ PDITSYNVLLEA+A+S
Sbjct: 34 RTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQS 93
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
GS+KEA+GVFRQMQ AGCVPNA TYSILLNLYGRHG+YDDVR+LFLEMKVSNTEP+AATY
Sbjct: 94 GSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY 153
Query: 23 NILIEVF 3
NILI VF
Sbjct: 154 NILINVF 160
Score = 78.2 bits (191), Expect = 7e-13
Identities = 37/127 (29%), Positives = 64/127 (50%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R M AG VP+ T++ L+ +G+ G+ + V +L EM+ P+ +YN+L+ +
Sbjct: 104 RQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEG 163
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
G KE + +F M PN TY L+ G+ G ++D +++ L M P + Y
Sbjct: 164 GYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAY 223
Query: 23 NILIEVF 3
+IE +
Sbjct: 224 TGVIEAY 230
Score = 71.2 bits (173), Expect = 8e-11
Identities = 30/125 (24%), Positives = 67/125 (53%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
MNE G+VP + ++E +G+ E+ M G+ P + +YN L++ +A+ G
Sbjct: 211 MNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGL 270
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
KE+ + +M +G N T++ ++ + + G++++ + ++EM+ + +PD T
Sbjct: 271 YKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEA 330
Query: 17 LIEVF 3
++ V+
Sbjct: 331 VLSVY 335
Score = 69.3 bits (168), Expect = 3e-10
Identities = 36/125 (28%), Positives = 63/125 (50%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M E + P++ T+ L+ GK G E ++L M +G +P +Y ++EAY ++
Sbjct: 176 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAAL 235
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+EA+ F M G P TY+ L+ ++ + G Y + + L+M S + T+N
Sbjct: 236 YEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNG 295
Query: 17 LIEVF 3
+IE F
Sbjct: 296 VIEAF 300
Score = 66.6 bits (161), Expect = 2e-09
Identities = 35/126 (27%), Positives = 67/126 (53%)
Frame = -1
Query: 380 SMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
+MNE G P + T+ +L++ F K G ++ +L +M G + ++N ++EA+ + G
Sbjct: 245 TMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGG 304
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+EAI + +M+ A C P+ T +L++Y G ++ E F E+K P Y
Sbjct: 305 QFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYC 364
Query: 20 ILIEVF 3
+++ V+
Sbjct: 365 MMLAVY 370
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 216 bits (550), Expect = 2e-54
Identities = 106/127 (83%), Positives = 119/127 (93%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R+MNE GI+PDITT++ LVETFGKL +LEKVSELLKEMES G+ PDITSYNVLLEA+A+S
Sbjct: 276 RTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQS 335
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
GS+KEA+GVFRQMQ AGCVPNA TYSILLNLYGRHG+YDDVR+LFLEMKVSNTEP+AATY
Sbjct: 336 GSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY 395
Query: 23 NILIEVF 3
NILI VF
Sbjct: 396 NILINVF 402
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLG-KLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
M + + P I T+ ++ + + G E++ L +M EG DI +YN LL A AR G
Sbjct: 207 MKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRG 266
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
EA VFR M G +P+ TTYS L+ +G+ + + V EL EM+ + PD +YN
Sbjct: 267 LGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYN 326
Query: 20 ILIE 9
+L+E
Sbjct: 327 VLLE 330
Score = 78.2 bits (191), Expect = 7e-13
Identities = 37/127 (29%), Positives = 64/127 (50%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R M AG VP+ T++ L+ +G+ G+ + V +L EM+ P+ +YN+L+ +
Sbjct: 346 RQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEG 405
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
G KE + +F M PN TY L+ G+ G ++D +++ L M P + Y
Sbjct: 406 GYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAY 465
Query: 23 NILIEVF 3
+IE +
Sbjct: 466 TGVIEAY 472
Score = 74.7 bits (182), Expect = 7e-12
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG- 201
M G+ P + + L+ +G+ G+ + ELL M+ E P I +YN ++ + AR G
Sbjct: 172 MPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGL 231
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+E +G+F QM+ G + TY+ LL+ R G D+ +F M PD TY+
Sbjct: 232 DWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYS 291
Query: 20 ILIEVF 3
L+E F
Sbjct: 292 YLVETF 297
Score = 71.2 bits (173), Expect = 8e-11
Identities = 30/125 (24%), Positives = 67/125 (53%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
MNE G+VP + ++E +G+ E+ M G+ P + +YN L++ +A+ G
Sbjct: 453 MNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGL 512
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
KE+ + +M +G N T++ ++ + + G++++ + ++EM+ + +PD T
Sbjct: 513 YKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEA 572
Query: 17 LIEVF 3
++ V+
Sbjct: 573 VLSVY 577
Score = 69.3 bits (168), Expect = 3e-10
Identities = 36/125 (28%), Positives = 63/125 (50%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M E + P++ T+ L+ GK G E ++L M +G +P +Y ++EAY ++
Sbjct: 418 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAAL 477
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+EA+ F M G P TY+ L+ ++ + G Y + + L+M S + T+N
Sbjct: 478 YEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNG 537
Query: 17 LIEVF 3
+IE F
Sbjct: 538 VIEAF 542
Score = 66.6 bits (161), Expect = 2e-09
Identities = 35/126 (27%), Positives = 67/126 (53%)
Frame = -1
Query: 380 SMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
+MNE G P + T+ +L++ F K G ++ +L +M G + ++N ++EA+ + G
Sbjct: 487 TMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGG 546
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+EAI + +M+ A C P+ T +L++Y G ++ E F E+K P Y
Sbjct: 547 QFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYC 606
Query: 20 ILIEVF 3
+++ V+
Sbjct: 607 MMLAVY 612
Score = 66.2 bits (160), Expect = 3e-09
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = -1
Query: 356 PDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGSMKEAIGV 177
P+ + ++ G+ G LEK E+ EM S G P + S+ L+ AY R+G K ++ +
Sbjct: 144 PNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLEL 203
Query: 176 FRQMQAAGCVPNATTYSILLNLYGRHG-KYDDVRELFLEMKVSNTEPDAATYNILI 12
+M+ P+ TY+ ++N R G ++++ LF +M+ + D TYN L+
Sbjct: 204 LDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLL 259
>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 754
Score = 211 bits (538), Expect = 4e-53
Identities = 103/127 (81%), Positives = 113/127 (88%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R+MNE G+VPDITT+ NLVETFGKL KLEKVSELLKEMES GNLPDI+SYNVLLEAYA
Sbjct: 272 RTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASK 331
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
G ++ A+GVFRQMQ A CVPNA TYS+LLNLYG HG+YDDVRELFLEMKVSNTEPD TY
Sbjct: 332 GDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTY 391
Query: 23 NILIEVF 3
N+LIEVF
Sbjct: 392 NVLIEVF 398
Score = 84.7 bits (208), Expect = 7e-15
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLG-KLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
M + + P I T+ ++ + + G E + L EM EG PDI +YN LL A A G
Sbjct: 203 MKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRG 262
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
EA VFR M G VP+ TTY L+ +G+ K + V EL EM+ S PD ++YN
Sbjct: 263 LGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYN 322
Query: 20 ILIEVF 3
+L+E +
Sbjct: 323 VLLEAY 328
Score = 81.6 bits (200), Expect = 6e-14
Identities = 41/127 (32%), Positives = 64/127 (50%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R M EA VP+ T++ L+ +G G+ + V EL EM+ PD+ +YNVL+E +
Sbjct: 342 RQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEG 401
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
G KE + +F M PN TY L+ G+ G ++D +++ L M P Y
Sbjct: 402 GYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAY 461
Query: 23 NILIEVF 3
+IE +
Sbjct: 462 TGVIEAY 468
Score = 72.0 bits (175), Expect = 5e-11
Identities = 37/123 (30%), Positives = 65/123 (52%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M E + P++ T+ L+ GK G E ++L M+ +G +P +Y ++EAY ++ S
Sbjct: 414 MVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAAS 473
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+EA+ +F M G P TY+ L+N++ R G Y + + +M S D ++N
Sbjct: 474 YEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNG 533
Query: 17 LIE 9
+IE
Sbjct: 534 VIE 536
Score = 69.7 bits (169), Expect = 2e-10
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = -1
Query: 365 GIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG-SMKE 189
G+ + ++ L+ ++G+ G+ E ELL+ M+ E P I +YN ++ + AR G + +
Sbjct: 172 GVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEG 231
Query: 188 AIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNILIE 9
+ +F +M+ G P+ TY+ LLN G D+ +F M PD TY L+E
Sbjct: 232 LLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVE 291
Query: 8 VF 3
F
Sbjct: 292 TF 293
Score = 68.9 bits (167), Expect = 4e-10
Identities = 29/125 (23%), Positives = 68/125 (54%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M+E GIVP + ++E +G+ E+ + M G+ P + +YN L+ +AR G
Sbjct: 449 MDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGL 508
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
KE+ + +M +G + +++ ++ Y + G++++ + ++E++ + +PD T+
Sbjct: 509 YKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEA 568
Query: 17 LIEVF 3
++ V+
Sbjct: 569 VLSVY 573
Score = 67.8 bits (164), Expect = 9e-10
Identities = 35/126 (27%), Positives = 66/126 (52%)
Frame = -1
Query: 380 SMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
+MNE G P + T+ +L+ F + G ++ ++ +M G D S+N ++E Y + G
Sbjct: 483 TMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGG 542
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+EAI + +++ A P+ T+ +L++Y G D+ E F E++ S P Y
Sbjct: 543 QFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYC 602
Query: 20 ILIEVF 3
++I V+
Sbjct: 603 MMIAVY 608
Score = 64.7 bits (156), Expect = 7e-09
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = -1
Query: 356 PDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGSMKEAIGV 177
P+ + ++ G+ G LEK +E+ +EM + G + SY L+ +Y R G + ++ +
Sbjct: 140 PNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLEL 199
Query: 176 FRQMQAAGCVPNATTYSILLNLYGRHG-KYDDVRELFLEMKVSNTEPDAATYNILI 12
+M+ P+ TY+ ++N R G ++ + LF EM+ +PD TYN L+
Sbjct: 200 LERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLL 255
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/113 (28%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M E+G+ D + ++E + + G+ E+ + E+E PD ++ +L Y +G
Sbjct: 519 MGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGL 578
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEM---KVSN 48
+ E+ FR+++A+G +P+ Y +++ +Y R ++DD E+ EM KVSN
Sbjct: 579 VDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSN 631
Score = 56.6 bits (135), Expect = 2e-06
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 338 ANLVETFGKLGKLEKVSELLKEMESE-GNLPDITSYNVLLEAYARSGSMKEAIGVFRQMQ 162
A + + F + G ++ L K M+ + P+ Y +++ R G ++++ +F +M
Sbjct: 110 ALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMP 169
Query: 161 AAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNILI 12
G + +Y+ L+N YGRHG+Y+ EL MK P TYN +I
Sbjct: 170 THGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVI 219
>ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 211 bits (537), Expect = 5e-53
Identities = 102/127 (80%), Positives = 117/127 (92%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R+MNE+GIVPDI T++ LV+TFGKL +LEKVSELL+EME GNLPDITSYNVLLEAYA
Sbjct: 264 RTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAEL 323
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
GS+KEA+GVFRQMQAAGCV NA TYS+LLNLYG+HG+YDDVR+LFLEMKVSNT+PDA TY
Sbjct: 324 GSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTY 383
Query: 23 NILIEVF 3
NILI+VF
Sbjct: 384 NILIQVF 390
Score = 81.6 bits (200), Expect = 6e-14
Identities = 40/127 (31%), Positives = 64/127 (50%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R M AG V + T++ L+ +GK G+ + V +L EM+ PD +YN+L++ +
Sbjct: 334 RQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEG 393
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
G KE + +F M PN TY L+ G+ G Y+D +++ L M P + Y
Sbjct: 394 GYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAY 453
Query: 23 NILIEVF 3
+IE F
Sbjct: 454 TGVIEAF 460
Score = 80.1 bits (196), Expect = 2e-13
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLG-KLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
M + + P I T+ ++ + G E + L EM EG PD+ +YN LL A A G
Sbjct: 195 MKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRG 254
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
EA VFR M +G VP+ TYS L+ +G+ + + V EL EM+ PD +YN
Sbjct: 255 LGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYN 314
Query: 20 ILIEVF 3
+L+E +
Sbjct: 315 VLLEAY 320
Score = 77.0 bits (188), Expect = 1e-12
Identities = 37/126 (29%), Positives = 67/126 (53%)
Frame = -1
Query: 380 SMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
+MNE G P + T+ +L+ F + G ++ +L M G D+ S+N ++EA+ + G
Sbjct: 475 TMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGG 534
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+EA+ + +M+ A C PN T +L++Y G D+ E F E+K S P Y
Sbjct: 535 QYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYC 594
Query: 20 ILIEVF 3
+++ ++
Sbjct: 595 MMLALY 600
Score = 75.9 bits (185), Expect = 3e-12
Identities = 33/125 (26%), Positives = 69/125 (55%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
MNE G+VP + ++E FG+ E+ + M G+ P + +YN L+ A+AR G
Sbjct: 441 MNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGL 500
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
KEA + +M +G + +++ ++ + + G+Y++ + ++EM+ +N EP+ T
Sbjct: 501 YKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEA 560
Query: 17 LIEVF 3
++ ++
Sbjct: 561 VLSIY 565
Score = 73.2 bits (178), Expect = 2e-11
Identities = 32/125 (25%), Positives = 68/125 (54%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M GI PD+ T+ L+ G ++ + + M G +PDI +Y+ L++ + +
Sbjct: 231 MRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNR 290
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+++ + R+M+ G +P+ T+Y++LL Y G + +F +M+ + +AATY++
Sbjct: 291 LEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSV 350
Query: 17 LIEVF 3
L+ ++
Sbjct: 351 LLNLY 355
Score = 70.1 bits (170), Expect = 2e-10
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG- 201
M G+V + ++ ++ +G+ G+ ELL M+ E P I +YN ++ A AR G
Sbjct: 160 MPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGL 219
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+ +G+F +M+ G P+ TY+ LL G D+ +F M S PD TY+
Sbjct: 220 DWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYS 279
Query: 20 ILIEVF 3
L++ F
Sbjct: 280 YLVQTF 285
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/125 (28%), Positives = 63/125 (50%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M E + P++ T+ L+ GK G E ++L M +G +P +Y ++EA+ ++
Sbjct: 406 MAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAAL 465
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+EA+ +F M G P TY+ L++ + R G Y + + M S + D ++N
Sbjct: 466 YEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNG 525
Query: 17 LIEVF 3
+IE F
Sbjct: 526 VIEAF 530
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = -1
Query: 356 PDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGSMKEAIGV 177
P+ H ++ G+ G L+K E+ EM S G + + SY ++ AY R+G ++ +
Sbjct: 132 PNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLEL 191
Query: 176 FRQMQAAGCVPNATTYSILLNLYGRHG-KYDDVRELFLEMKVSNTEPDAATYNILI 12
M+ P+ TY+ ++N R G ++ + LF EM+ +PD TYN L+
Sbjct: 192 LNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLL 247
Score = 55.5 bits (132), Expect = 5e-06
Identities = 30/113 (26%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
MNE+G+ D+ + ++E F + G+ E+ + EME P+ + +L Y +G
Sbjct: 511 MNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGL 570
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVREL---FLEMKVSN 48
+ E F++++A+G +P+ Y ++L LY ++ + +D L + M+VS+
Sbjct: 571 VDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSD 623
>ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 209 bits (533), Expect = 1e-52
Identities = 101/127 (79%), Positives = 117/127 (92%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R+MNE+GIVPDI T++ LV+TFGKL +LEKVSELL+EMES GNLPDITSYNVLLEAYA
Sbjct: 266 RTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAEL 325
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
GS+KEA+ VFRQMQAAGCV NA TYS+LLNLYG+HG+YDDVR++FLEMKVSNT+PDA TY
Sbjct: 326 GSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTY 385
Query: 23 NILIEVF 3
NILI+VF
Sbjct: 386 NILIQVF 392
Score = 80.1 bits (196), Expect = 2e-13
Identities = 39/127 (30%), Positives = 64/127 (50%)
Frame = -1
Query: 383 RSMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARS 204
R M AG V + T++ L+ +GK G+ + V ++ EM+ PD +YN+L++ +
Sbjct: 336 RQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEG 395
Query: 203 GSMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATY 24
G KE + +F M PN TY L+ G+ G Y+D +++ L M P + Y
Sbjct: 396 GYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAY 455
Query: 23 NILIEVF 3
+IE F
Sbjct: 456 TGVIEAF 462
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLG-KLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
M + + P I T+ ++ + G E + L EM EG PD+ +YN LL A A G
Sbjct: 197 MKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRG 256
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
EA VFR M +G VP+ TYS L+ +G+ + + V EL EM+ PD +YN
Sbjct: 257 LGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYN 316
Query: 20 ILIEVF 3
+L+E +
Sbjct: 317 VLLEAY 322
Score = 76.3 bits (186), Expect = 2e-12
Identities = 34/125 (27%), Positives = 69/125 (55%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
MNE GIVP + ++E FG+ E+ + M G+ P + +YN + A+AR G
Sbjct: 443 MNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGL 502
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
KEA + +M +G + +++ ++ + + G+Y++ + ++EM+ +N EP+ T +
Sbjct: 503 YKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEV 562
Query: 17 LIEVF 3
++ V+
Sbjct: 563 VLSVY 567
Score = 75.9 bits (185), Expect = 3e-12
Identities = 35/126 (27%), Positives = 67/126 (53%)
Frame = -1
Query: 380 SMNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG 201
+MNE G P + T+ + + F + G ++ +L M G D+ S+N +++A+ + G
Sbjct: 477 TMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGG 536
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+EA+ + +M+ A C PN T ++L++Y G D+ E F E+K S P Y
Sbjct: 537 QYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYC 596
Query: 20 ILIEVF 3
+++ ++
Sbjct: 597 LMLALY 602
Score = 75.1 bits (183), Expect = 6e-12
Identities = 32/125 (25%), Positives = 70/125 (56%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M GI PD+ T+ L+ G ++ + + M G +PDI +Y+ L++ + +
Sbjct: 233 MRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNR 292
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+++ + R+M++ G +P+ T+Y++LL Y G + ++F +M+ + +AATY++
Sbjct: 293 LEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSV 352
Query: 17 LIEVF 3
L+ ++
Sbjct: 353 LLNLY 357
Score = 67.8 bits (164), Expect = 9e-10
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSG- 201
M G+ + + ++ +G+ G+ ELL M+ E P I +YN ++ A AR G
Sbjct: 162 MPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGL 221
Query: 200 SMKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYN 21
+ +G+F +M+ G P+ TY+ LL G D+ +F M S PD TY+
Sbjct: 222 DWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYS 281
Query: 20 ILIEVF 3
L++ F
Sbjct: 282 YLVQTF 287
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/125 (27%), Positives = 62/125 (49%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
M E + P++ T+ L+ GK G E ++L M +G +P +Y ++EA+ ++
Sbjct: 408 MVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAAL 467
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEMKVSNTEPDAATYNI 18
+EA+ VF M G P TY+ ++ + R G Y + + M S + D ++N
Sbjct: 468 YEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNG 527
Query: 17 LIEVF 3
+I+ F
Sbjct: 528 VIKAF 532
Score = 59.3 bits (142), Expect = 3e-07
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = -1
Query: 356 PDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGSMKEAIGV 177
P+ + ++ G+ G L+K E+ EM S G + Y ++ AY R+G ++ +
Sbjct: 134 PNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLEL 193
Query: 176 FRQMQAAGCVPNATTYSILLNLYGRHG-KYDDVRELFLEMKVSNTEPDAATYNILI 12
M+ P+ TY+ ++N R G ++ + LF EM+ +PD TYN L+
Sbjct: 194 LNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLL 249
Score = 57.8 bits (138), Expect = 9e-07
Identities = 29/106 (27%), Positives = 59/106 (55%)
Frame = -1
Query: 377 MNEAGIVPDITTHANLVETFGKLGKLEKVSELLKEMESEGNLPDITSYNVLLEAYARSGS 198
MNE+G+ D+ + +++ F + G+ E+ + EME P+ + V+L Y +G
Sbjct: 513 MNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGL 572
Query: 197 MKEAIGVFRQMQAAGCVPNATTYSILLNLYGRHGKYDDVRELFLEM 60
+ E+ F++++A+G +P+ Y ++L LY ++ + +D L EM
Sbjct: 573 VDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618