BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015899
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244...   363   4e-98
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              363   4e-98
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   330   4e-88
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   327   2e-87
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   327   3e-87

>ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244254 [Vitis vinifera]
          Length = 1576

 Score =  363 bits (931), Expect = 4e-98
 Identities = 177/248 (71%), Positives = 202/248 (81%), Gaps = 5/248 (2%)
 Frame = -1

Query: 889  EIDYLRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFWRGNLDLLAMEVAGNKF 710
            EIDY+RVLN VLPKDIRV+GWCPVP  FHARFSCLSREYKY FWRGNL++LAME AG KF
Sbjct: 1324 EIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKF 1383

Query: 709  VGQHDFRNFCKMDAANVHNYRRHITXXXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMV 530
            VG+HDFRNFCKMDA NVHNYRRHI            +G++L A+ IKGSAFLWHQ+RCMV
Sbjct: 1384 VGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIKIKGSAFLWHQVRCMV 1443

Query: 529  AVLFMIGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQS 350
            AVLFMIG GLE PDV+D LLD  +T RKPQY MAPE+PL+L+SCEFEGLKF CS DAGQ+
Sbjct: 1444 AVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQA 1503

Query: 349  LHEHLKNEIRYYRLQAAIFQEGLLSC---SSTTKGQIPLNH--IKKKAAHIPLMSRPTEP 185
            L  HL+NE R Y+LQAAIF E LLSC   +++ + Q  LN+  IKK+AAHI LMSRPTEP
Sbjct: 1504 LRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQNSLNNGTIKKEAAHIDLMSRPTEP 1563

Query: 184  SYEERKAK 161
            SYEER+AK
Sbjct: 1564 SYEERRAK 1571


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  363 bits (931), Expect = 4e-98
 Identities = 177/248 (71%), Positives = 202/248 (81%), Gaps = 5/248 (2%)
 Frame = -1

Query: 889 EIDYLRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFWRGNLDLLAMEVAGNKF 710
           EIDY+RVLN VLPKDIRV+GWCPVP  FHARFSCLSREYKY FWRGNL++LAME AG KF
Sbjct: 214 EIDYMRVLNRVLPKDIRVMGWCPVPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKF 273

Query: 709 VGQHDFRNFCKMDAANVHNYRRHITXXXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMV 530
           VG+HDFRNFCKMDA NVHNYRRHI            +G++L A+ IKGSAFLWHQ+RCMV
Sbjct: 274 VGEHDFRNFCKMDAVNVHNYRRHIISFEIAPTNNRYDGNQLWAIKIKGSAFLWHQVRCMV 333

Query: 529 AVLFMIGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQS 350
           AVLFMIG GLE PDV+D LLD  +T RKPQY MAPE+PL+L+SCEFEGLKF CS DAGQ+
Sbjct: 334 AVLFMIGQGLESPDVVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQA 393

Query: 349 LHEHLKNEIRYYRLQAAIFQEGLLSC---SSTTKGQIPLNH--IKKKAAHIPLMSRPTEP 185
           L  HL+NE R Y+LQAAIF E LLSC   +++ + Q  LN+  IKK+AAHI LMSRPTEP
Sbjct: 394 LRMHLENECRTYQLQAAIFHEALLSCLPSANSAEKQNSLNNGTIKKEAAHIDLMSRPTEP 453

Query: 184 SYEERKAK 161
           SYEER+AK
Sbjct: 454 SYEERRAK 461


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  330 bits (845), Expect = 4e-88
 Identities = 157/245 (64%), Positives = 189/245 (77%), Gaps = 2/245 (0%)
 Frame = -1

Query: 889 EIDYLRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFWRGNLDLLAMEVAGNKF 710
           EIDY+ VLN VLP DIR++GWCP P +FHARFSCLSREYKY FW+ NL++ A+EVAGNK 
Sbjct: 177 EIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIPAIEVAGNKL 236

Query: 709 VGQHDFRNFCKMDAANVHNYRRHITXXXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMV 530
           VG+HDFRNFCKMDAANVHNYRR IT             ++L  + I+GSAFLWHQ+RCMV
Sbjct: 237 VGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRGSAFLWHQVRCMV 296

Query: 529 AVLFMIGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQS 350
           AVLFM+G GLE P+VID LLD ++  RKPQY MA E+PL+LQSCEF+ +KF CS DAG++
Sbjct: 297 AVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEA 356

Query: 349 LHEHLKNEIRYYRLQAAIFQEGLLSCSSTTKGQ--IPLNHIKKKAAHIPLMSRPTEPSYE 176
           L  HL NE + Y+LQAAIF E LL+C   +  Q  +P    KKK +H+PLMSRPTEPSYE
Sbjct: 357 LRVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYE 416

Query: 175 ERKAK 161
           ER+AK
Sbjct: 417 ERRAK 421


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 438

 Score =  327 bits (838), Expect = 2e-87
 Identities = 157/236 (66%), Positives = 186/236 (78%), Gaps = 2/236 (0%)
 Frame = -1

Query: 889 EIDYLRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFWRGNLDLLAMEVAGNKF 710
           EIDY+RVLN VLP DIR+IGWCPVP++F ARFSCLSREYKY F   NL+LLAME AG KF
Sbjct: 198 EIDYVRVLNRVLPNDIRIIGWCPVPNDFSARFSCLSREYKYFFRGDNLNLLAMESAGKKF 257

Query: 709 VGQHDFRNFCKMDAANVHNYRRHITXXXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMV 530
           +G+HDFRNFCKMDA NVHNYRR+IT           EG++L A+ I+GSAFLWHQ+RCMV
Sbjct: 258 IGEHDFRNFCKMDAMNVHNYRRNITSFEISPCHERYEGNQLFAIKIRGSAFLWHQVRCMV 317

Query: 529 AVLFMIGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQS 350
           AVLFMIG GLE PDVID LLD  +TPRKPQY MAPE+PL+L SC+FEGL+F CS DAG++
Sbjct: 318 AVLFMIGQGLESPDVIDVLLDTVRTPRKPQYPMAPEIPLVLHSCDFEGLQFTCSTDAGKA 377

Query: 349 LHEHLKNEIRYYRLQAAIFQEGLLSCSSTTKGQIPLNH--IKKKAAHIPLMSRPTE 188
           L  HL+NE R Y+LQAAIF E + SC   + G+   N+   +KKA+H+PLM RPTE
Sbjct: 378 LRTHLENECRLYQLQAAIFHEAIFSCLPLSNGRSLSNNGTCEKKASHVPLMLRPTE 433


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  327 bits (837), Expect = 3e-87
 Identities = 156/245 (63%), Positives = 187/245 (76%), Gaps = 2/245 (0%)
 Frame = -1

Query: 889 EIDYLRVLNAVLPKDIRVIGWCPVPHNFHARFSCLSREYKYLFWRGNLDLLAMEVAGNKF 710
           EIDY+RVLN VLP DIR++GWCP P +FHARFSCLSREYKY FW+ NL++ AME AGNK 
Sbjct: 177 EIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENLNIQAMESAGNKL 236

Query: 709 VGQHDFRNFCKMDAANVHNYRRHITXXXXXXXXXXSEGDELLAMTIKGSAFLWHQIRCMV 530
           VG+HDFRNFCKMDAANVHNYRR I              ++L  + I+GSAFLWHQ+RCMV
Sbjct: 237 VGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIRGSAFLWHQVRCMV 296

Query: 529 AVLFMIGHGLEVPDVIDELLDINKTPRKPQYVMAPELPLILQSCEFEGLKFNCSPDAGQS 350
            VLFM+G GLE P+VID LLD  +  RKPQY MA E+PL+LQSCEF+ +KF CS +AG++
Sbjct: 297 VVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEA 356

Query: 349 LHEHLKNEIRYYRLQAAIFQEGLLSCSSTTKGQIPLNH--IKKKAAHIPLMSRPTEPSYE 176
           LH HL NE + Y+LQAAIF E LL+C   +  Q  L+    KKK +H+PLMSRPTEPSYE
Sbjct: 357 LHVHLVNECQIYQLQAAIFHEALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTEPSYE 416

Query: 175 ERKAK 161
           ER+AK
Sbjct: 417 ERRAK 421