BLASTX nr result

ID: Coptis23_contig00015888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015888
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510586.1| protein with unknown function [Ricinus commu...   156   2e-49
emb|CBI19924.3| unnamed protein product [Vitis vinifera]              154   9e-48
ref|XP_002269229.1| PREDICTED: protein FAM206A [Vitis vinifera]       154   9e-48
ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-47
gb|AFW66737.1| hypothetical protein ZEAMMB73_109561 [Zea mays]        154   3e-46

>ref|XP_002510586.1| protein with unknown function [Ricinus communis]
           gi|223551287|gb|EEF52773.1| protein with unknown
           function [Ricinus communis]
          Length = 282

 Score =  156 bits (395), Expect(2) = 2e-49
 Identities = 74/98 (75%), Positives = 85/98 (86%)
 Frame = -1

Query: 469 NGLCVIGLAPTHIALRENEPIKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFV 290
           NGLCVIGLAPTH+A ++   I +VDFNVGKS+RS  KVTGK K+NA+HFE NTALCKV  
Sbjct: 147 NGLCVIGLAPTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTALCKVCT 206

Query: 289 KETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGY 176
           ++ SYIVRCCVKGSLLEVND+LIKQP LLNS+ADREGY
Sbjct: 207 RDASYIVRCCVKGSLLEVNDKLIKQPGLLNSSADREGY 244



 Score = 64.3 bits (155), Expect(2) = 2e-49
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -3

Query: 125 ADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRD 21
           ADREGY AI MPKPGDWLKI++ LLTLEEYKKLR+
Sbjct: 239 ADREGYTAIMMPKPGDWLKIKSSLLTLEEYKKLRE 273


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  154 bits (389), Expect(2) = 9e-48
 Identities = 73/98 (74%), Positives = 85/98 (86%)
 Frame = -1

Query: 469  NGLCVIGLAPTHIALRENEPIKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFV 290
            NGLCVIGLAP+H+AL E   + +VDFNVGK++RS IKVTGK K+NA+HFE N+ALCKV  
Sbjct: 784  NGLCVIGLAPSHVALTEKGGVTAVDFNVGKTDRSGIKVTGKRKKNAQHFESNSALCKVCT 843

Query: 289  KETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGY 176
             + SYIVRCCVKG+LLEVNDRLIKQP LLNS+ADREGY
Sbjct: 844  NDASYIVRCCVKGNLLEVNDRLIKQPGLLNSSADREGY 881



 Score = 61.2 bits (147), Expect(2) = 9e-48
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -3

Query: 125 ADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRDLC 15
           ADREGYIAI MPKP DWLK++  L+ +EEYKKL+++C
Sbjct: 876 ADREGYIAIIMPKPADWLKVKASLIDIEEYKKLKEVC 912


>ref|XP_002269229.1| PREDICTED: protein FAM206A [Vitis vinifera]
          Length = 196

 Score =  154 bits (389), Expect(2) = 9e-48
 Identities = 73/98 (74%), Positives = 85/98 (86%)
 Frame = -1

Query: 469 NGLCVIGLAPTHIALRENEPIKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFV 290
           NGLCVIGLAP+H+AL E   + +VDFNVGK++RS IKVTGK K+NA+HFE N+ALCKV  
Sbjct: 68  NGLCVIGLAPSHVALTEKGGVTAVDFNVGKTDRSGIKVTGKRKKNAQHFESNSALCKVCT 127

Query: 289 KETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGY 176
            + SYIVRCCVKG+LLEVNDRLIKQP LLNS+ADREGY
Sbjct: 128 NDASYIVRCCVKGNLLEVNDRLIKQPGLLNSSADREGY 165



 Score = 61.2 bits (147), Expect(2) = 9e-48
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -3

Query: 125 ADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRDLC 15
           ADREGYIAI MPKP DWLK++  L+ +EEYKKL+++C
Sbjct: 160 ADREGYIAIIMPKPADWLKVKASLIDIEEYKKLKEVC 196


>ref|XP_002300690.1| predicted protein [Populus trichocarpa] gi|222842416|gb|EEE79963.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  154 bits (389), Expect(2) = 3e-47
 Identities = 75/98 (76%), Positives = 84/98 (85%)
 Frame = -1

Query: 469 NGLCVIGLAPTHIALRENEPIKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFV 290
           NGLCVIGLA TH+A ++   I  VDFNVGKS+RS IKVTGK K+NA+HFE NTALCKV  
Sbjct: 77  NGLCVIGLARTHVAFKDEGGITVVDFNVGKSDRSGIKVTGKRKKNAQHFESNTALCKVCT 136

Query: 289 KETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGY 176
           +  SYIVRCCVKGSLLEVNDRLIKQP+LLNS+ADREGY
Sbjct: 137 QNDSYIVRCCVKGSLLEVNDRLIKQPELLNSSADREGY 174



 Score = 59.7 bits (143), Expect(2) = 3e-47
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 125 ADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRD 21
           ADREGYIAI MPKP DWLK++  LL LEEYKKLR+
Sbjct: 169 ADREGYIAIIMPKPADWLKVKASLLGLEEYKKLRE 203


>gb|AFW66737.1| hypothetical protein ZEAMMB73_109561 [Zea mays]
          Length = 201

 Score =  154 bits (390), Expect(2) = 3e-46
 Identities = 71/98 (72%), Positives = 85/98 (86%)
 Frame = -1

Query: 469 NGLCVIGLAPTHIALRENEPIKSVDFNVGKSNRSEIKVTGKHKRNARHFERNTALCKVFV 290
           NGLCV+GLAP H+  +E   I +VDFNVGKS+RSE+KVTGK KRNA+H + N+ALCKV V
Sbjct: 73  NGLCVVGLAPAHVVFKEEGVISTVDFNVGKSDRSEMKVTGKRKRNAQHLQENSALCKVCV 132

Query: 289 KETSYIVRCCVKGSLLEVNDRLIKQPDLLNSAADREGY 176
            + S+IVRCCVKGSLLE+N+RLIKQPDLLN+AADREGY
Sbjct: 133 NDKSFIVRCCVKGSLLEINERLIKQPDLLNTAADREGY 170



 Score = 55.8 bits (133), Expect(2) = 3e-46
 Identities = 23/37 (62%), Positives = 29/37 (78%)
 Frame = -3

Query: 125 ADREGYIAITMPKPGDWLKIRNLLLTLEEYKKLRDLC 15
           ADREGYIA+  PKP DWLKI++  L+ E+YK LR +C
Sbjct: 165 ADREGYIAVFQPKPADWLKIKDKFLSYEDYKNLRGVC 201


Top