BLASTX nr result

ID: Coptis23_contig00015878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015878
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263396.2| PREDICTED: uncharacterized protein At4g26485...    67   2e-09
emb|CBI39845.3| unnamed protein product [Vitis vinifera]               67   2e-09
emb|CAN65240.1| hypothetical protein VITISV_043406 [Vitis vinifera]    64   1e-08
ref|XP_003634764.1| PREDICTED: uncharacterized protein At4g26485...    60   2e-07
emb|CAN72285.1| hypothetical protein VITISV_013531 [Vitis vinifera]    56   4e-06

>ref|XP_002263396.2| PREDICTED: uncharacterized protein At4g26485 [Vitis vinifera]
          Length = 364

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/88 (39%), Positives = 47/88 (53%)
 Frame = +3

Query: 144 PRTLSTPPINPATNDSLWIFHEYFRNTELMYGRIGYDVRQVTRETLRAGFDRYMTGAPRR 323
           PR +  P     +N+   IF  YF +    +GR GYDV     E LR GF+RYM   P R
Sbjct: 271 PRHMGLPLTISVSNECSRIFDGYFNHAVETFGRTGYDVGYTVHEALRLGFERYMAEGPGR 330

Query: 324 DINGFTMLLRDLHRLSTSRLEWLQRSLI 407
            + G+  LL++L  LS  R  +LQR L+
Sbjct: 331 TLTGYINLLQELQHLSRLRSAFLQRMLL 358


>emb|CBI39845.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/88 (39%), Positives = 47/88 (53%)
 Frame = +3

Query: 144 PRTLSTPPINPATNDSLWIFHEYFRNTELMYGRIGYDVRQVTRETLRAGFDRYMTGAPRR 323
           PR +  P     +N+   IF  YF +    +GR GYDV     E LR GF+RYM   P R
Sbjct: 423 PRHMGLPLTISVSNECSRIFDGYFNHAVETFGRTGYDVGYTVHEALRLGFERYMAEGPGR 482

Query: 324 DINGFTMLLRDLHRLSTSRLEWLQRSLI 407
            + G+  LL++L  LS  R  +LQR L+
Sbjct: 483 TLTGYINLLQELQHLSRLRSAFLQRMLL 510


>emb|CAN65240.1| hypothetical protein VITISV_043406 [Vitis vinifera]
          Length = 297

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/88 (38%), Positives = 46/88 (52%)
 Frame = +3

Query: 144 PRTLSTPPINPATNDSLWIFHEYFRNTELMYGRIGYDVRQVTRETLRAGFDRYMTGAPRR 323
           PR +  P     +N+   IF  YF +    +GR GYDV     E  R GF+RYM   P R
Sbjct: 204 PRHMGLPLTISVSNECSRIFDGYFNHAVETFGRNGYDVGYTVHEAXRLGFERYMAEGPGR 263

Query: 324 DINGFTMLLRDLHRLSTSRLEWLQRSLI 407
            + G+  LL++L  LS  R  +LQR L+
Sbjct: 264 TLTGYINLLQELQHLSRLRSAFLQRMLL 291


>ref|XP_003634764.1| PREDICTED: uncharacterized protein At4g26485-like [Vitis vinifera]
           gi|296090018|emb|CBI39837.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +3

Query: 192 LWIFHEYFRNTELMYGRIGYDVRQVTRETLRAGFDRYMTGAPRRDINGFTMLLRDLHRLS 371
           L IF  YF +    +GR GYDV     E  R GF+RYM   P R + G+  LL++L  LS
Sbjct: 278 LTIFDGYFNHAVETFGRNGYDVGYTVHEAFRLGFERYMAEGPGRTLTGYINLLQELQHLS 337

Query: 372 TSRLEWLQRSLI 407
             R  +LQR L+
Sbjct: 338 RLRSAFLQRMLL 349


>emb|CAN72285.1| hypothetical protein VITISV_013531 [Vitis vinifera]
          Length = 940

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/77 (37%), Positives = 40/77 (51%)
 Frame = +3

Query: 144 PRTLSTPPINPATNDSLWIFHEYFRNTELMYGRIGYDVRQVTRETLRAGFDRYMTGAPRR 323
           PR +  P     +N+   IF   F +    +GR GYDV     E LR GF+RYM   P R
Sbjct: 560 PRHMGLPLTISVSNECSRIFDGCFNHAVETFGRNGYDVGYTVHEALRLGFERYMAEGPGR 619

Query: 324 DINGFTMLLRDLHRLST 374
            + G+  LL++L  LS+
Sbjct: 620 TLTGYINLLQELQHLSS 636


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