BLASTX nr result

ID: Coptis23_contig00015875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015875
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253...   182   4e-44
emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]   182   4e-44
emb|CBI26728.3| unnamed protein product [Vitis vinifera]              169   4e-40
ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putativ...   168   8e-40
ref|XP_002298848.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39

>ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253712 [Vitis vinifera]
          Length = 1212

 Score =  182 bits (462), Expect = 4e-44
 Identities = 100/181 (55%), Positives = 120/181 (66%)
 Frame = +2

Query: 5   SSCLTHLLKESLGGNAKLTVICAISPDEKCKAETLSTLRFGLKAKSLKNEPVVNEITEDD 184
           SS LTH+L+ESLGGNAKLTVICAISPD K   ETLSTLRFG +AK + NEPV+NEITED 
Sbjct: 384 SSSLTHMLRESLGGNAKLTVICAISPDSKSNGETLSTLRFGQRAKCISNEPVINEITEDH 443

Query: 185 VNDLSDQIRQLKEELIKAKSGGSSSLDCNSRYFKGRNARESLNQLRVSLNXXXXXXXXXX 364
           VNDLSD+IRQLKEELI+AKS   +S   N+ YFKGRN RESLNQLRVSLN          
Sbjct: 444 VNDLSDKIRQLKEELIRAKSDVYNSTGSNNGYFKGRNVRESLNQLRVSLNRSLLLPHIDN 503

Query: 365 XXXXXXXXXXXXXXXLCIQLDSLRSSGEENFQDAYEETECFQESSFEENSDPIMTNNPSC 544
                          L +QLD+L SS E+  +D+ ++ +     S EENS+  + + P  
Sbjct: 504 DSEEELNIDEHDVRELHLQLDNLHSSCEDQSKDSSDDRDSIHFCSLEENSEMDLMSEPDI 563

Query: 545 S 547
           S
Sbjct: 564 S 564


>emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]
          Length = 1219

 Score =  182 bits (462), Expect = 4e-44
 Identities = 100/181 (55%), Positives = 120/181 (66%)
 Frame = +2

Query: 5   SSCLTHLLKESLGGNAKLTVICAISPDEKCKAETLSTLRFGLKAKSLKNEPVVNEITEDD 184
           SS LTH+L+ESLGGNAKLTVICAISPD K   ETLSTLRFG +AK + NEPV+NEITED 
Sbjct: 366 SSSLTHMLRESLGGNAKLTVICAISPDSKSNGETLSTLRFGQRAKCISNEPVINEITEDH 425

Query: 185 VNDLSDQIRQLKEELIKAKSGGSSSLDCNSRYFKGRNARESLNQLRVSLNXXXXXXXXXX 364
           VNDLSD+IRQLKEELI+AKS   +S   N+ YFKGRN RESLNQLRVSLN          
Sbjct: 426 VNDLSDKIRQLKEELIRAKSDVYNSTGSNNGYFKGRNVRESLNQLRVSLNRSLLLPHIDN 485

Query: 365 XXXXXXXXXXXXXXXLCIQLDSLRSSGEENFQDAYEETECFQESSFEENSDPIMTNNPSC 544
                          L +QLD+L SS E+  +D+ ++ +     S EENS+  + + P  
Sbjct: 486 DSEEELNIDEHDVRELHLQLDNLHSSCEDQSKDSSDDRDSIHFCSLEENSEMDLMSEPDI 545

Query: 545 S 547
           S
Sbjct: 546 S 546


>emb|CBI26728.3| unnamed protein product [Vitis vinifera]
          Length = 1174

 Score =  169 bits (428), Expect = 4e-40
 Identities = 99/194 (51%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
 Frame = +2

Query: 5   SSCLTHLLKESLGGNAKLTVICAISPDEKCKAETLSTLRFGLKAKSLKNEPVVNEITEDD 184
           SS LTH+L+ESLGGNAKLTVICAISPD K   ETLSTLRFG +AK + NEPV+NEITED 
Sbjct: 384 SSSLTHMLRESLGGNAKLTVICAISPDSKSNGETLSTLRFGQRAKCISNEPVINEITEDH 443

Query: 185 VNDLSDQIRQLKEELIKAKSGGSSSLDCNSRYFKGRNARESLNQLRVSLNXXXXXXXXXX 364
           VNDLSD+IRQLKEELI+AKS   +S   N+ YFKGRN RESLNQLRVSLN          
Sbjct: 444 VNDLSDKIRQLKEELIRAKSDVYNSTGSNNGYFKGRNVRESLNQLRVSLNRSLLLPHIDN 503

Query: 365 XXXXXXXXXXXXXXXLCIQLDSLRSSGEENFQDAYEETECFQESSFEE-NSDPIMTNNPS 541
                          L +QLD+L  + E +   +  +  C +E    E N +      P 
Sbjct: 504 DSEEELNIDEHDVRELHLQLDNLHKNSEMDLM-SEPDISCQEEGETGEINLEIPQKELPH 562

Query: 542 CSIVTCSDIDTDIP 583
            ++ T  D   D+P
Sbjct: 563 NNMATTMDNPMDVP 576


>ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
           gi|223531520|gb|EEF33351.1| Chromosome-associated
           kinesin KIF4A, putative [Ricinus communis]
          Length = 1183

 Score =  168 bits (425), Expect = 8e-40
 Identities = 93/170 (54%), Positives = 112/170 (65%)
 Frame = +2

Query: 2   ESSCLTHLLKESLGGNAKLTVICAISPDEKCKAETLSTLRFGLKAKSLKNEPVVNEITED 181
           + SCLT+LL+ESLGGN+KLTVIC ISP+ +   ETL TLRFG + KS+KNEPV+NEI+ED
Sbjct: 379 KGSCLTYLLQESLGGNSKLTVICNISPENRYNGETLRTLRFGQRVKSIKNEPVINEISED 438

Query: 182 DVNDLSDQIRQLKEELIKAKSGGSSSLDCNSRYFKGRNARESLNQLRVSLNXXXXXXXXX 361
           DVNDLSDQIRQLKEELI+AKS   +S+   +RYFKGRNARESLN LRVSLN         
Sbjct: 439 DVNDLSDQIRQLKEELIRAKSDVHNSVGNKNRYFKGRNARESLNHLRVSLNRSLILPRID 498

Query: 362 XXXXXXXXXXXXXXXXLCIQLDSLRSSGEENFQDAYEETECFQESSFEEN 511
                           L  QL  L SS EEN +D  +       +S +E+
Sbjct: 499 NDSDNEVEVDEDDVKELHQQLKKLHSSCEENLKDLSDTRNSSHFASVDES 548


>ref|XP_002298848.1| predicted protein [Populus trichocarpa] gi|222846106|gb|EEE83653.1|
           predicted protein [Populus trichocarpa]
          Length = 1178

 Score =  166 bits (419), Expect = 4e-39
 Identities = 91/170 (53%), Positives = 110/170 (64%)
 Frame = +2

Query: 2   ESSCLTHLLKESLGGNAKLTVICAISPDEKCKAETLSTLRFGLKAKSLKNEPVVNEITED 181
           + SCLTHLL+ESLGGNAKLTV+C ISP+ +   ETL TLRFG + K +KN+PV+NEI+ED
Sbjct: 376 QGSCLTHLLRESLGGNAKLTVMCCISPNNRNNGETLRTLRFGQRVKFIKNDPVINEISED 435

Query: 182 DVNDLSDQIRQLKEELIKAKSGGSSSLDCNSRYFKGRNARESLNQLRVSLNXXXXXXXXX 361
           DVNDLSDQIRQLKEELI+AKS   +S +  S YFKGRN RESLN LRVSLN         
Sbjct: 436 DVNDLSDQIRQLKEELIRAKSDVHNSFEGRSGYFKGRNVRESLNHLRVSLNRSLMLPRID 495

Query: 362 XXXXXXXXXXXXXXXXLCIQLDSLRSSGEENFQDAYEETECFQESSFEEN 511
                           L  QL+ L  S +EN +D  +  +    SS EE+
Sbjct: 496 TDSDNEVNIDENDVRELHQQLNKLHCSPDENSRDLSDNGDSAHFSSVEES 545


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