BLASTX nr result

ID: Coptis23_contig00015863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015863
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   137   9e-31
gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine...   137   9e-31
gb|ACU01868.1| ubiquitin specific protease 12 variant 1 [Glycine...   137   9e-31
gb|AAZ81950.1| putative ubiquitin protease [Oryza sativa Indica ...   130   9e-29
tpg|DAA54900.1| TPA: hypothetical protein ZEAMMB73_893644 [Zea m...   130   9e-29

>ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13 [Glycine max]
          Length = 1121

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +2

Query: 113  LLVQNNQTAHILYYEVLDILLPELECLKTLEVTFHHATKEEVVKHCITLPEHSTVADLIS 292
            +L+ +NQT+ ILYYEVLDI LPEL+CLKTL++TFHHATK+EVV H I LP HSTV+D+I+
Sbjct: 881  MLIHSNQTSDILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPRHSTVSDVIN 940

Query: 293  DLKRKVELSHPNVELRLLEVFDHKIYKI 376
            DLK KV+LSHP+ ELRLLEVF HKIYKI
Sbjct: 941  DLKSKVDLSHPDAELRLLEVFYHKIYKI 968


>gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine max]
          Length = 792

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +2

Query: 113 LLVQNNQTAHILYYEVLDILLPELECLKTLEVTFHHATKEEVVKHCITLPEHSTVADLIS 292
           +L+ +NQT+ ILYYEVLDI LPEL+CLKTL++TFHHATK+EVV H I LP HSTV+D+I+
Sbjct: 684 MLIHSNQTSDILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPRHSTVSDVIN 743

Query: 293 DLKRKVELSHPNVELRLLEVFDHKIYKI 376
           DLK KV+LSHP+ ELRLLEVF HKIYKI
Sbjct: 744 DLKSKVDLSHPDAELRLLEVFYHKIYKI 771


>gb|ACU01868.1| ubiquitin specific protease 12 variant 1 [Glycine max]
          Length = 989

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +2

Query: 113  LLVQNNQTAHILYYEVLDILLPELECLKTLEVTFHHATKEEVVKHCITLPEHSTVADLIS 292
            +L+ +NQT+ ILYYEVLDI LPEL+CLKTL++TFHHATK+EVV H I LP HSTV+D+I+
Sbjct: 881  MLIHSNQTSDILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPRHSTVSDVIN 940

Query: 293  DLKRKVELSHPNVELRLLEVFDHKIYKI 376
            DLK KV+LSHP+ ELRLLEVF HKIYKI
Sbjct: 941  DLKSKVDLSHPDAELRLLEVFYHKIYKI 968


>gb|AAZ81950.1| putative ubiquitin protease [Oryza sativa Indica Group]
          Length = 350

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/88 (72%), Positives = 77/88 (87%)
 Frame = +2

Query: 113 LLVQNNQTAHILYYEVLDILLPELECLKTLEVTFHHATKEEVVKHCITLPEHSTVADLIS 292
           +LV  NQT+ ILYYEVLDI LPEL+CLKTL+V FHHATK+EVV H I LP++ST++D+I+
Sbjct: 108 MLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVIT 167

Query: 293 DLKRKVELSHPNVELRLLEVFDHKIYKI 376
           DLK KVELS+P+ ELRLLEVF HKIYKI
Sbjct: 168 DLKTKVELSNPDAELRLLEVFYHKIYKI 195


>tpg|DAA54900.1| TPA: hypothetical protein ZEAMMB73_893644 [Zea mays]
          Length = 418

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/88 (72%), Positives = 76/88 (86%)
 Frame = +2

Query: 113 LLVQNNQTAHILYYEVLDILLPELECLKTLEVTFHHATKEEVVKHCITLPEHSTVADLIS 292
           +LV  NQT+ ILYYEVLDI LPEL+CLKTL+V FHHATK+EVV H I LP +ST++D+I+
Sbjct: 176 MLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHATKDEVVVHSIRLPRNSTISDVIT 235

Query: 293 DLKRKVELSHPNVELRLLEVFDHKIYKI 376
           DLK KVELS+P+ ELRLLEVF HKIYKI
Sbjct: 236 DLKTKVELSNPDTELRLLEVFYHKIYKI 263


Top