BLASTX nr result

ID: Coptis23_contig00015860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015860
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272015.1| PREDICTED: uncharacterized protein LOC100264...    64   1e-08
emb|CAN82642.1| hypothetical protein VITISV_024902 [Vitis vinifera]    64   1e-08
ref|XP_002299357.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABK94653.1| unknown [Populus trichocarpa]                           59   5e-07
ref|XP_002512681.1| conserved hypothetical protein [Ricinus comm...    58   9e-07

>ref|XP_002272015.1| PREDICTED: uncharacterized protein LOC100264392 isoform 1 [Vitis
           vinifera] gi|225425288|ref|XP_002272062.1| PREDICTED:
           uncharacterized protein LOC100264392 isoform 2 [Vitis
           vinifera] gi|296085538|emb|CBI29270.3| unnamed protein
           product [Vitis vinifera]
          Length = 218

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = +3

Query: 72  PKFEENDKDPLLDISSMGSNKDFWLIQWPVNQTPDFDGQEITLKLQR 212
           P+F E+ KD L+D+S M  +K+ WLIQWPVNQ PDFDGQE++LKL +
Sbjct: 13  PEFIEDTKDSLVDLS-MTDSKELWLIQWPVNQHPDFDGQELSLKLHQ 58


>emb|CAN82642.1| hypothetical protein VITISV_024902 [Vitis vinifera]
          Length = 340

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = +3

Query: 72  PKFEENDKDPLLDISSMGSNKDFWLIQWPVNQTPDFDGQEITLKLQR 212
           P+F E+ KD L+D+S M  +K+ WLIQWPVNQ PDFDGQE++LKL +
Sbjct: 80  PEFIEDTKDSLVDLS-MTDSKELWLIQWPVNQHPDFDGQELSLKLHQ 125


>ref|XP_002299357.1| predicted protein [Populus trichocarpa] gi|222846615|gb|EEE84162.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/51 (49%), Positives = 39/51 (76%)
 Frame = +3

Query: 60  KPDVPKFEENDKDPLLDISSMGSNKDFWLIQWPVNQTPDFDGQEITLKLQR 212
           KP+ P FEE+ ++PL DIS +  + + WLIQWP+N+ PDF+G+E++L L +
Sbjct: 11  KPE-PGFEEDSREPLADIS-LSDSTELWLIQWPINELPDFNGKELSLSLDQ 59


>gb|ABK94653.1| unknown [Populus trichocarpa]
          Length = 231

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/51 (49%), Positives = 39/51 (76%)
 Frame = +3

Query: 60  KPDVPKFEENDKDPLLDISSMGSNKDFWLIQWPVNQTPDFDGQEITLKLQR 212
           KP+ P FEE+ ++PL DIS +  + + WLIQWP+N+ PDF+G+E++L L +
Sbjct: 11  KPE-PGFEEDSREPLADIS-LSDSTELWLIQWPINELPDFNGKELSLSLDQ 59


>ref|XP_002512681.1| conserved hypothetical protein [Ricinus communis]
           gi|223548642|gb|EEF50133.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/43 (53%), Positives = 33/43 (76%)
 Frame = +3

Query: 78  FEENDKDPLLDISSMGSNKDFWLIQWPVNQTPDFDGQEITLKL 206
           FEE+ ++PL+D+S   S  + WLIQWP N+ PDF+G+EI+L L
Sbjct: 10  FEEDSREPLVDLSFTDSTSELWLIQWPHNELPDFNGKEISLNL 52


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