BLASTX nr result

ID: Coptis23_contig00015858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015858
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...    92   3e-17
ref|XP_003572803.1| PREDICTED: protein FAR1-RELATED SEQUENCE 4-l...    91   1e-16
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...    90   2e-16
ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group] g...    90   2e-16
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...    90   2e-16

>ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Glycine max]
          Length = 669

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   RQTTFTVSLNLNDLDIKCNCRLFEFRGILCRHALTVL-IHKKVQKVPEKYILRRWRKDVK 177
           +  TF V  N  D +++C C LFEF+GILCRH L++L + +K + VP KY+   WRKD+K
Sbjct: 533 KYVTFNVQFNEEDFEVQCECHLFEFKGILCRHILSLLKLIRKTESVPSKYVFSHWRKDLK 592

Query: 178 RQHTKVKISYFDWLQNPDNER 240
           R+HT V+ SY D + NP+ ER
Sbjct: 593 RKHTLVRSSYGDLIANPEAER 613


>ref|XP_003572803.1| PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Brachypodium
           distachyon]
          Length = 573

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/72 (55%), Positives = 52/72 (72%)
 Frame = +1

Query: 13  FTVSLNLNDLDIKCNCRLFEFRGILCRHALTVLIHKKVQKVPEKYILRRWRKDVKRQHTK 192
           FTV  +  + D++C CRLFEFRGILC H L+VL   ++ +VP +YIL+RWRKD KR+HT 
Sbjct: 400 FTVLFDQGECDVQCACRLFEFRGILCSHILSVLALMEITEVPSRYILQRWRKDFKRKHTF 459

Query: 193 VKISYFDWLQNP 228
           +K SY D L  P
Sbjct: 460 IKCSYDDMLNTP 471


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/70 (58%), Positives = 49/70 (70%)
 Frame = +1

Query: 19  VSLNLNDLDIKCNCRLFEFRGILCRHALTVLIHKKVQKVPEKYILRRWRKDVKRQHTKVK 198
           V  N  D D+ C CR FEFRGILCRH L++L    ++KVP KYIL+RWRKD KR+HT +K
Sbjct: 529 VLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIK 588

Query: 199 ISYFDWLQNP 228
            SY D L  P
Sbjct: 589 CSYDDQLDTP 598


>ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group]
           gi|255680367|dbj|BAF28820.2| Os11g0681400 [Oryza sativa
           Japonica Group]
          Length = 715

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/70 (58%), Positives = 49/70 (70%)
 Frame = +1

Query: 19  VSLNLNDLDIKCNCRLFEFRGILCRHALTVLIHKKVQKVPEKYILRRWRKDVKRQHTKVK 198
           V  N  D D+ C CR FEFRGILCRH L++L    ++KVP KYIL+RWRKD KR+HT +K
Sbjct: 385 VLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIK 444

Query: 199 ISYFDWLQNP 228
            SY D L  P
Sbjct: 445 CSYDDQLDTP 454


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/70 (58%), Positives = 49/70 (70%)
 Frame = +1

Query: 19  VSLNLNDLDIKCNCRLFEFRGILCRHALTVLIHKKVQKVPEKYILRRWRKDVKRQHTKVK 198
           V  N  D D+ C CR FEFRGILCRH L++L    ++KVP KYIL+RWRKD KR+HT +K
Sbjct: 529 VLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIK 588

Query: 199 ISYFDWLQNP 228
            SY D L  P
Sbjct: 589 CSYDDQLDTP 598


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